RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 RPS8P62241 208 aaKnown RBP17.02■□□□□ 0.32
PTPN7-207ENST00000468385 MLLT1Q03111 559 aaPredicted RBP17.02■□□□□ 0.32
PTPN7-207ENST00000468385 DUSP27Q5VZP5 1158 aa17.02■□□□□ 0.32
PTPN7-207ENST00000468385 KRT26Q7Z3Y9 468 aa17.02■□□□□ 0.32
PTPN7-207ENST00000468385 CFAP44Q96MT7 982 aa17.02■□□□□ 0.32
PTPN7-207ENST00000468385 CASP8AP2Q9UKL3 1982 aa17.02■□□□□ 0.31
PTPN7-207ENST00000468385 FAM155AB1AL88 458 aaPredicted RBP17.01■□□□□ 0.31
PTPN7-207ENST00000468385 RBM26Q5T8P6 1007 aaKnown RBP17.01■□□□□ 0.31
PTPN7-207ENST00000468385 RGMBQ6NW40 437 aa17.01■□□□□ 0.31
PTPN7-207ENST00000468385 GBA2Q9HCG7 927 aaPredicted RBP17.01■□□□□ 0.31
PTPN7-207ENST00000468385 PODXL2Q9NZ53 605 aa17.01■□□□□ 0.31
PTPN7-207ENST00000468385 VIL1P09327 827 aaKnown RBP17■□□□□ 0.31
PTPN7-207ENST00000468385 WDR43Q15061 677 aaKnown RBP eCLIP17■□□□□ 0.31
PTPN7-207ENST00000468385 ZBTB38Q8NAP3 1195 aaPredicted RBP17■□□□□ 0.31
PTPN7-207ENST00000468385 DCPSQ96C86 337 aaKnown RBP17■□□□□ 0.31
PTPN7-207ENST00000468385 SEC31BQ9NQW1 1179 aa17■□□□□ 0.31
PTPN7-207ENST00000468385 MBIPQ9NS73 344 aa17■□□□□ 0.31
PTPN7-207ENST00000468385 ADAMTS8Q9UP79 889 aa17■□□□□ 0.31
PTPN7-207ENST00000468385 SCN9AQ15858 1988 aa16.99■□□□□ 0.31
PTPN7-207ENST00000468385 DGKZQ13574 1117 aa16.99■□□□□ 0.31
PTPN7-207ENST00000468385 KIF4BQ2VIQ3 1234 aa16.99■□□□□ 0.31
PTPN7-207ENST00000468385 RIC3Q7Z5B4 369 aa16.99■□□□□ 0.31
PTPN7-207ENST00000468385 C2orf69Q8N8R5 385 aa16.99■□□□□ 0.31
PTPN7-207ENST00000468385 ZC3H12CQ9C0D7 883 aaKnown RBP16.99■□□□□ 0.31
PTPN7-207ENST00000468385 POLR2AP24928 1970 aaKnown RBP16.98■□□□□ 0.31
PTPN7-207ENST00000468385 SLC34A2O95436 690 aa16.98■□□□□ 0.31
PTPN7-207ENST00000468385 ZNF853P0CG23 659 aa16.98■□□□□ 0.31
PTPN7-207ENST00000468385 PHAXQ9H814 394 aaKnown RBP16.98■□□□□ 0.31
PTPN7-207ENST00000468385 ASTN2O75129 1339 aaPredicted RBP16.97■□□□□ 0.31
PTPN7-207ENST00000468385 UFL1O94874 794 aa16.97■□□□□ 0.31
PTPN7-207ENST00000468385 KIF23Q02241 960 aaPredicted RBP16.97■□□□□ 0.31
PTPN7-207ENST00000468385 GOLGA2Q08379 1002 aa16.97■□□□□ 0.31
PTPN7-207ENST00000468385 DDX10Q13206 875 aaKnown RBP16.97■□□□□ 0.31
PTPN7-207ENST00000468385 CCDC102AQ96A19 550 aa16.97■□□□□ 0.31
PTPN7-207ENST00000468385 MYD88Q99836 296 aa16.97■□□□□ 0.31
PTPN7-207ENST00000468385 SAGE1Q9NXZ1 904 aa16.97■□□□□ 0.31
PTPN7-207ENST00000468385 GGA3Q9NZ52 723 aa16.97■□□□□ 0.31
PTPN7-207ENST00000468385 ZNF157P51786 506 aaPredicted RBP16.96■□□□□ 0.31
PTPN7-207ENST00000468385 ANKIB1Q9P2G1 1089 aa16.96■□□□□ 0.31
PTPN7-207ENST00000468385 GGA1Q9UJY5 639 aa16.96■□□□□ 0.31
PTPN7-207ENST00000468385 ZNF609O15014 1411 aa16.96■□□□□ 0.3
PTPN7-207ENST00000468385 PCCAP05165 728 aaPredicted RBP16.95■□□□□ 0.3
PTPN7-207ENST00000468385 SLC10A3P09131 477 aa16.95■□□□□ 0.3
PTPN7-207ENST00000468385 HSP90B1P14625 803 aaKnown RBP16.95■□□□□ 0.3
PTPN7-207ENST00000468385 ZNF280AP59817 542 aaPredicted RBP16.95■□□□□ 0.3
PTPN7-207ENST00000468385 CCDC152Q4G0S7 254 aa16.95■□□□□ 0.3
PTPN7-207ENST00000468385 RSBN1LQ6PCB5 846 aaPredicted RBP16.95■□□□□ 0.3
PTPN7-207ENST00000468385 SULF1Q8IWU6 871 aa16.95■□□□□ 0.3
PTPN7-207ENST00000468385 CCDC191Q8NCU4 936 aa16.95■□□□□ 0.3
PTPN7-207ENST00000468385 CDCA5Q96FF9 252 aa16.95■□□□□ 0.3
PTPN7-207ENST00000468385 PDE8AO60658 829 aa16.94■□□□□ 0.3
PTPN7-207ENST00000468385 AGBL3Q8NEM8 1001 aa16.94■□□□□ 0.3
PTPN7-207ENST00000468385 JARID2Q92833 1246 aaPredicted RBP16.94■□□□□ 0.3
PTPN7-207ENST00000468385 CCDC85AQ96PX6 553 aaPredicted RBP16.94■□□□□ 0.3
PTPN7-207ENST00000468385 IFT57Q9NWB7 429 aa16.94■□□□□ 0.3
PTPN7-207ENST00000468385 RNF186Q9NXI6 227 aa16.94■□□□□ 0.3
PTPN7-207ENST00000468385 G3V3G9 751 aa16.93■□□□□ 0.3
PTPN7-207ENST00000468385 ELL2O00472 640 aaPredicted RBP16.93■□□□□ 0.3
PTPN7-207ENST00000468385 SCARF1Q14162 830 aa16.93■□□□□ 0.3
PTPN7-207ENST00000468385 DCAF8Q5TAQ9 597 aa16.93■□□□□ 0.3
PTPN7-207ENST00000468385 ANGEL2Q5VTE6 544 aaKnown RBP16.93■□□□□ 0.3
PTPN7-207ENST00000468385 CSRNP1Q96S65 589 aa16.93■□□□□ 0.3
PTPN7-207ENST00000468385 GMLQ99445 158 aa16.93■□□□□ 0.3
PTPN7-207ENST00000468385 CWC25Q9NXE8 425 aaPredicted RBP16.93■□□□□ 0.3
PTPN7-207ENST00000468385 PSME4Q14997 1843 aa16.92■□□□□ 0.3
PTPN7-207ENST00000468385 TRPA1O75762 1119 aa16.92■□□□□ 0.3
PTPN7-207ENST00000468385 METTL22Q9BUU2 404 aaPredicted RBP16.92■□□□□ 0.3
PTPN7-207ENST00000468385 XDHP47989 1333 aa16.92■□□□□ 0.3
PTPN7-207ENST00000468385 APAF1O14727 1248 aa16.91■□□□□ 0.3
PTPN7-207ENST00000468385 GNAI1P63096 354 aa16.91■□□□□ 0.3
PTPN7-207ENST00000468385 RASAL3Q86YV0 1011 aa16.91■□□□□ 0.3
PTPN7-207ENST00000468385 ANKRD18AQ8IVF6 992 aa16.91■□□□□ 0.3
PTPN7-207ENST00000468385 C8orf58Q8NAV2 365 aa16.91■□□□□ 0.3
PTPN7-207ENST00000468385 MYOZ2Q9NPC6 264 aa16.91■□□□□ 0.3
PTPN7-207ENST00000468385 USP17L8P0C7I0 530 aa16.9■□□□□ 0.3
PTPN7-207ENST00000468385 ATP2B4P23634 1241 aa16.9■□□□□ 0.3
PTPN7-207ENST00000468385 PODNQ7Z5L7 613 aa16.9■□□□□ 0.3
PTPN7-207ENST00000468385 USP17L3A6NCW0 530 aa16.89■□□□□ 0.29
PTPN7-207ENST00000468385 USP17L4A6NCW7 530 aa16.89■□□□□ 0.29
PTPN7-207ENST00000468385 WTIPA6NIX2 430 aaPredicted RBP16.89■□□□□ 0.29
PTPN7-207ENST00000468385 FKBP1BP68106 108 aa16.89■□□□□ 0.29
PTPN7-207ENST00000468385 USP17L1Q7RTZ2 530 aa16.89■□□□□ 0.29
PTPN7-207ENST00000468385 PITPNM2Q9BZ72 1349 aa16.89■□□□□ 0.29
PTPN7-207ENST00000468385 PAPPA2Q9BXP8 1791 aa16.89■□□□□ 0.29
PTPN7-207ENST00000468385 AKAP11Q9UKA4 1901 aa16.88■□□□□ 0.29
PTPN7-207ENST00000468385 NPM3O75607 178 aaKnown RBP16.88■□□□□ 0.29
PTPN7-207ENST00000468385 DDX58O95786 925 aaKnown RBP16.88■□□□□ 0.29
PTPN7-207ENST00000468385 CTSWP56202 376 aa16.88■□□□□ 0.29
PTPN7-207ENST00000468385 CALD1Q05682 793 aaKnown RBP16.88■□□□□ 0.29
PTPN7-207ENST00000468385 PRKRIP1Q9H875 184 aaPredicted RBP16.88■□□□□ 0.29
PTPN7-207ENST00000468385 SCAF8Q9UPN6 1271 aaKnown RBP16.88■□□□□ 0.29
PTPN7-207ENST00000468385 MAP3K2Q9Y2U5 619 aa16.88■□□□□ 0.29
PTPN7-207ENST00000468385 IGKV5-2P06315 115 aa16.87■□□□□ 0.29
PTPN7-207ENST00000468385 CCDC30Q5VVM6 783 aa16.87■□□□□ 0.29
PTPN7-207ENST00000468385 MOB2Q70IA6 237 aa16.87■□□□□ 0.29
PTPN7-207ENST00000468385 REM2Q8IYK8 340 aaPredicted RBP16.87■□□□□ 0.29
PTPN7-207ENST00000468385 TTLL11Q8NHH1 800 aa16.87■□□□□ 0.29
PTPN7-207ENST00000468385 CDC5LQ99459 802 aaKnown RBP16.87■□□□□ 0.29
PTPN7-207ENST00000468385 MINPP1Q9UNW1 487 aa16.87■□□□□ 0.29
PTPN7-207ENST00000468385 MED23Q9ULK4 1368 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms