RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 CIAPIN1Q6FI81 312 aa14.64□□□□□ -0.07
CDHR3-205ENST00000468143 EYA3Q99504 573 aa14.64□□□□□ -0.07
CDHR3-205ENST00000468143 ZC3H12CQ9C0D7 883 aaKnown RBP14.64□□□□□ -0.07
CDHR3-205ENST00000468143 KCNQ5Q9NR82 932 aa14.64□□□□□ -0.07
CDHR3-205ENST00000468143 SMC4Q9NTJ3 1288 aa14.64□□□□□ -0.07
CDHR3-205ENST00000468143 PODXL2Q9NZ53 605 aa14.64□□□□□ -0.07
CDHR3-205ENST00000468143 GGA1Q9UJY5 639 aa14.64□□□□□ -0.07
CDHR3-205ENST00000468143 MINPP1Q9UNW1 487 aa14.64□□□□□ -0.07
CDHR3-205ENST00000468143 CHMP3Q9Y3E7 222 aa14.64□□□□□ -0.07
CDHR3-205ENST00000468143 G3V3G9 751 aa14.63□□□□□ -0.07
CDHR3-205ENST00000468143 GRM8O00222 908 aa14.63□□□□□ -0.07
CDHR3-205ENST00000468143 ALDH1L1O75891 902 aa14.63□□□□□ -0.07
CDHR3-205ENST00000468143 IGHMBP2P38935 993 aaKnown RBP14.63□□□□□ -0.07
CDHR3-205ENST00000468143 DCAF8Q5TAQ9 597 aa14.63□□□□□ -0.07
CDHR3-205ENST00000468143 BSDC1Q9NW68 430 aaPredicted RBP14.63□□□□□ -0.07
CDHR3-205ENST00000468143 ECE2O60344 883 aa14.62□□□□□ -0.07
CDHR3-205ENST00000468143 GMPSP49915 693 aaPredicted RBP14.62□□□□□ -0.07
CDHR3-205ENST00000468143 HNRNPUQ00839 825 aaKnown RBP eCLIP14.62□□□□□ -0.07
CDHR3-205ENST00000468143 TNIP1Q15025 636 aa14.62□□□□□ -0.07
CDHR3-205ENST00000468143 ALDH1L2Q3SY69 923 aa14.62□□□□□ -0.07
CDHR3-205ENST00000468143 IFFO2Q5TF58 517 aa14.62□□□□□ -0.07
CDHR3-205ENST00000468143 LMBR1LQ6UX01 489 aa14.62□□□□□ -0.07
CDHR3-205ENST00000468143 PNMA8AQ86V59 439 aaPredicted RBP14.62□□□□□ -0.07
CDHR3-205ENST00000468143 LDHDQ86WU2 507 aa14.62□□□□□ -0.07
CDHR3-205ENST00000468143 ZBTB12Q9Y330 459 aaPredicted RBP14.62□□□□□ -0.07
CDHR3-205ENST00000468143 XDHP47989 1333 aa14.62□□□□□ -0.07
CDHR3-205ENST00000468143 RTL9Q8NET4 1388 aa14.61□□□□□ -0.07
CDHR3-205ENST00000468143 LRRC37AA6NMS7 1700 aa14.61□□□□□ -0.07
CDHR3-205ENST00000468143 ANKRD18BA2A2Z9 1011 aa14.61□□□□□ -0.07
CDHR3-205ENST00000468143 NBPF7P0C2Y1 421 aaPredicted RBP14.61□□□□□ -0.07
CDHR3-205ENST00000468143 ATP2B4P23634 1241 aa14.61□□□□□ -0.07
CDHR3-205ENST00000468143 MAP1SQ66K74 1059 aaPredicted RBP14.61□□□□□ -0.07
CDHR3-205ENST00000468143 MPHOSPH8Q99549 860 aa14.61□□□□□ -0.07
CDHR3-205ENST00000468143 GPRC5DQ9NZD1 345 aa14.61□□□□□ -0.07
CDHR3-205ENST00000468143 PTPRCP08575 1304 aa14.61□□□□□ -0.07
CDHR3-205ENST00000468143 SHTN1A0MZ66 631 aa14.6□□□□□ -0.07
CDHR3-205ENST00000468143 PSMD14O00487 310 aa14.6□□□□□ -0.07
CDHR3-205ENST00000468143 IFIT5Q13325 482 aaKnown RBP14.6□□□□□ -0.07
CDHR3-205ENST00000468143 DNAJC5GQ8N7S2 189 aa14.6□□□□□ -0.07
CDHR3-205ENST00000468143 SUCLG2Q96I99 432 aa14.6□□□□□ -0.07
CDHR3-205ENST00000468143 ZNF594Q96JF6 807 aaPredicted RBP14.6□□□□□ -0.07
CDHR3-205ENST00000468143 NOB1Q9ULX3 412 aaKnown RBP14.6□□□□□ -0.07
CDHR3-205ENST00000468143 CCT4P50991 539 aaKnown RBP14.59□□□□□ -0.07
CDHR3-205ENST00000468143 KAZALD1Q96I82 304 aa14.59□□□□□ -0.07
CDHR3-205ENST00000468143 LTBP1Q14766 1721 aa14.58□□□□□ -0.07
CDHR3-205ENST00000468143 ITGBL1O95965 494 aaPredicted RBP14.58□□□□□ -0.08
CDHR3-205ENST00000468143 CHRNDQ07001 517 aa14.58□□□□□ -0.08
CDHR3-205ENST00000468143 CCDC57Q2TAC2 916 aa14.58□□□□□ -0.08
CDHR3-205ENST00000468143 CNTROBQ8N137 903 aa14.58□□□□□ -0.08
CDHR3-205ENST00000468143 HELBQ8NG08 1087 aaPredicted RBP14.58□□□□□ -0.08
CDHR3-205ENST00000468143 ADARB2Q9NS39 739 aaKnown RBP14.58□□□□□ -0.08
CDHR3-205ENST00000468143 CNOT7Q9UIV1 285 aaKnown RBP14.58□□□□□ -0.08
CDHR3-205ENST00000468143 SCN4AP35499 1836 aa14.57□□□□□ -0.08
CDHR3-205ENST00000468143 CACNA1FO60840 1977 aa14.57□□□□□ -0.08
CDHR3-205ENST00000468143 SNAP23O00161 211 aa14.57□□□□□ -0.08
CDHR3-205ENST00000468143 PLIN1O60240 522 aa14.57□□□□□ -0.08
CDHR3-205ENST00000468143 TAF5LO75529 589 aa14.57□□□□□ -0.08
CDHR3-205ENST00000468143 CT47B1P0C2W7 299 aaPredicted RBP14.57□□□□□ -0.08
CDHR3-205ENST00000468143 RARSP54136 660 aaKnown RBP14.57□□□□□ -0.08
CDHR3-205ENST00000468143 TAF7LQ5H9L4 462 aa14.57□□□□□ -0.08
CDHR3-205ENST00000468143 USP50Q70EL3 339 aaPredicted RBP14.57□□□□□ -0.08
CDHR3-205ENST00000468143 TXNRD3Q86VQ6 643 aa14.57□□□□□ -0.08
CDHR3-205ENST00000468143 MICALL2Q8IY33 904 aa14.57□□□□□ -0.08
CDHR3-205ENST00000468143 ANKRD2Q9GZV1 360 aa14.57□□□□□ -0.08
CDHR3-205ENST00000468143 H7C1D1 291 aa14.56□□□□□ -0.08
CDHR3-205ENST00000468143 KLRK1P26718 216 aa14.56□□□□□ -0.08
CDHR3-205ENST00000468143 HIRAP54198 1017 aaPredicted RBP14.56□□□□□ -0.08
CDHR3-205ENST00000468143 FMR1Q06787 632 aaKnown RBP eCLIP14.56□□□□□ -0.08
CDHR3-205ENST00000468143 RBM26Q5T8P6 1007 aaKnown RBP14.56□□□□□ -0.08
CDHR3-205ENST00000468143 LDHAL6AQ6ZMR3 332 aa14.56□□□□□ -0.08
CDHR3-205ENST00000468143 USP44Q9H0E7 712 aa14.56□□□□□ -0.08
CDHR3-205ENST00000468143 LEMD3Q9Y2U8 911 aa14.56□□□□□ -0.08
CDHR3-205ENST00000468143 ZNF804BA4D1E1 1349 aa14.56□□□□□ -0.08
CDHR3-205ENST00000468143 UTYO14607 1347 aa14.56□□□□□ -0.08
CDHR3-205ENST00000468143 KCNJ4P48050 445 aa14.55□□□□□ -0.08
CDHR3-205ENST00000468143 SAMD7Q7Z3H4 446 aa14.55□□□□□ -0.08
CDHR3-205ENST00000468143 TRPM4Q8TD43 1214 aa14.55□□□□□ -0.08
CDHR3-205ENST00000468143 BICC1Q9H694 974 aaKnown RBP14.55□□□□□ -0.08
CDHR3-205ENST00000468143 CNNM1Q9NRU3 951 aa14.55□□□□□ -0.08
CDHR3-205ENST00000468143 PASKQ96RG2 1323 aa14.55□□□□□ -0.08
CDHR3-205ENST00000468143 BCAR3O75815 825 aa14.54□□□□□ -0.08
CDHR3-205ENST00000468143 VIL1P09327 827 aaKnown RBP14.54□□□□□ -0.08
CDHR3-205ENST00000468143 TBC1D10BQ4KMP7 808 aaPredicted RBP14.54□□□□□ -0.08
CDHR3-205ENST00000468143 DPF2Q92785 391 aa14.54□□□□□ -0.08
CDHR3-205ENST00000468143 FBXW7Q969H0 707 aa14.54□□□□□ -0.08
CDHR3-205ENST00000468143 KLRG1Q96E93 195 aa14.54□□□□□ -0.08
CDHR3-205ENST00000468143 PUS3Q9BZE2 481 aaKnown RBP14.54□□□□□ -0.08
CDHR3-205ENST00000468143 API5Q9BZZ5 524 aaKnown RBP14.54□□□□□ -0.08
CDHR3-205ENST00000468143 MED23Q9ULK4 1368 aa14.53□□□□□ -0.08
CDHR3-205ENST00000468143 TRAF5O00463 557 aa14.53□□□□□ -0.08
CDHR3-205ENST00000468143 EGFRP00533 1210 aa14.53□□□□□ -0.08
CDHR3-205ENST00000468143 PODNQ7Z5L7 613 aa14.53□□□□□ -0.08
CDHR3-205ENST00000468143 ANKRD44Q8N8A2 993 aa14.53□□□□□ -0.08
CDHR3-205ENST00000468143 FRAT1Q92837 279 aaPredicted RBP14.53□□□□□ -0.08
CDHR3-205ENST00000468143 MXD3Q9BW11 206 aa14.53□□□□□ -0.08
CDHR3-205ENST00000468143 MYH3P11055 1940 aa14.53□□□□□ -0.08
CDHR3-205ENST00000468143 SPEF2Q9C093 1822 aa14.52□□□□□ -0.08
CDHR3-205ENST00000468143 USP17L3A6NCW0 530 aa14.52□□□□□ -0.09
CDHR3-205ENST00000468143 USP17L4A6NCW7 530 aa14.52□□□□□ -0.09
CDHR3-205ENST00000468143 RPS12P25398 132 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms