RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	CTSW	P56202	376 aa		15.2	■□□□□ 0.02
CTNS-205	ENST00000467663	FKBP5	Q13451	457 aa	Predicted RBP	15.2	■□□□□ 0.02
CTNS-205	ENST00000467663	WASHC4	Q2M389	1173 aa		15.2	■□□□□ 0.02
CTNS-205	ENST00000467663	CIAPIN1	Q6FI81	312 aa		15.2	■□□□□ 0.02
CTNS-205	ENST00000467663	ATF7IP	Q6VMQ6	1270 aa		15.2	■□□□□ 0.02
CTNS-205	ENST00000467663	JMY	Q8N9B5	988 aa		15.2	■□□□□ 0.02
CTNS-205	ENST00000467663	DNAAF4	Q8WXU2	420 aa		15.2	■□□□□ 0.02
CTNS-205	ENST00000467663	PODXL2	Q9NZ53	605 aa		15.2	■□□□□ 0.02
CTNS-205	ENST00000467663	POLL	Q9UGP5	575 aa		15.2	■□□□□ 0.02
CTNS-205	ENST00000467663	GCKR	Q14397	625 aa		15.19	■□□□□ 0.02
CTNS-205	ENST00000467663	TNIP1	Q15025	636 aa		15.19	■□□□□ 0.02
CTNS-205	ENST00000467663	USP50	Q70EL3	339 aa	Predicted RBP	15.19	■□□□□ 0.02
CTNS-205	ENST00000467663	LINS1	Q8NG48	757 aa		15.19	■□□□□ 0.02
CTNS-205	ENST00000467663	TTLL11	Q8NHH1	800 aa		15.19	■□□□□ 0.02
CTNS-205	ENST00000467663	TBC1D16	Q8TBP0	767 aa		15.19	■□□□□ 0.02
CTNS-205	ENST00000467663	CREBZF	Q9NS37	354 aa		15.19	■□□□□ 0.02
CTNS-205	ENST00000467663	GPRC5D	Q9NZD1	345 aa		15.19	■□□□□ 0.02
CTNS-205	ENST00000467663	CLEC11A	Q9Y240	323 aa		15.19	■□□□□ 0.02
CTNS-205	ENST00000467663	LTBP1	Q14766	1721 aa		15.19	■□□□□ 0.02
CTNS-205	ENST00000467663	YDJC	A8MPS7	323 aa		15.18	■□□□□ 0.02
CTNS-205	ENST00000467663	C6orf229	H3BNL8	230 aa		15.18	■□□□□ 0.02
CTNS-205	ENST00000467663	ANKRD18A	Q8IVF6	992 aa		15.18	■□□□□ 0.02
CTNS-205	ENST00000467663	DZIP1L	Q8IYY4	767 aa	Known RBP	15.18	■□□□□ 0.02
CTNS-205	ENST00000467663	CNTROB	Q8N137	903 aa		15.18	■□□□□ 0.02
CTNS-205	ENST00000467663	FRAT1	Q92837	279 aa	Predicted RBP	15.18	■□□□□ 0.02
CTNS-205	ENST00000467663	CCDC85A	Q96PX6	553 aa	Predicted RBP	15.18	■□□□□ 0.02
CTNS-205	ENST00000467663	EYA3	Q99504	573 aa		15.18	■□□□□ 0.02
CTNS-205	ENST00000467663	PLA2G12B	Q9BX93	195 aa		15.18	■□□□□ 0.02
CTNS-205	ENST00000467663	PPP4R2	Q9NY27	417 aa		15.18	■□□□□ 0.02
CTNS-205	ENST00000467663	RTL9	Q8NET4	1388 aa		15.18	■□□□□ 0.02
CTNS-205	ENST00000467663	RAD17	O75943	681 aa		15.17	■□□□□ 0.02
CTNS-205	ENST00000467663	GMPS	P49915	693 aa	Predicted RBP	15.17	■□□□□ 0.02
CTNS-205	ENST00000467663	CASP7	P55210	303 aa		15.17	■□□□□ 0.02
CTNS-205	ENST00000467663	MAP1S	Q66K74	1059 aa	Predicted RBP	15.17	■□□□□ 0.02
CTNS-205	ENST00000467663	UBE3B	Q7Z3V4	1068 aa		15.17	■□□□□ 0.02
CTNS-205	ENST00000467663	FTSJ3	Q8IY81	847 aa	Known RBP	15.17	■□□□□ 0.02
CTNS-205	ENST00000467663	CDC5L	Q99459	802 aa	Known RBP	15.17	■□□□□ 0.02
CTNS-205	ENST00000467663	BCL2L13	Q9BXK5	485 aa		15.17	■□□□□ 0.02
CTNS-205	ENST00000467663	NOB1	Q9ULX3	412 aa	Known RBP	15.17	■□□□□ 0.02
CTNS-205	ENST00000467663	RIMBP2	O15034	1052 aa		15.16	■□□□□ 0.02
CTNS-205	ENST00000467663	PLIN1	O60240	522 aa		15.16	■□□□□ 0.02
CTNS-205	ENST00000467663	GREM2	Q9H772	168 aa		15.16	■□□□□ 0.02
CTNS-205	ENST00000467663	ADARB2	Q9NS39	739 aa	Known RBP	15.16	■□□□□ 0.02
CTNS-205	ENST00000467663	ANKIB1	Q9P2G1	1089 aa		15.16	■□□□□ 0.02
CTNS-205	ENST00000467663	BEND3	Q5T5X7	828 aa		15.15	■□□□□ 0.02
CTNS-205	ENST00000467663	ZC3H12C	Q9C0D7	883 aa	Known RBP	15.15	■□□□□ 0.02
CTNS-205	ENST00000467663	DBNDD1	Q9H9R9	158 aa		15.15	■□□□□ 0.02
CTNS-205	ENST00000467663	BSDC1	Q9NW68	430 aa	Predicted RBP	15.15	■□□□□ 0.02
CTNS-205	ENST00000467663	GGA1	Q9UJY5	639 aa		15.15	■□□□□ 0.02
CTNS-205	ENST00000467663	XDH	P47989	1333 aa		15.15	■□□□□ 0.02
CTNS-205	ENST00000467663	TMEM88B	A6NKF7	163 aa		15.14	■□□□□ 0.01
CTNS-205	ENST00000467663		F6X3S4	739 aa		15.14	■□□□□ 0.01
CTNS-205	ENST00000467663	ECE2	O60344	883 aa		15.14	■□□□□ 0.01
CTNS-205	ENST00000467663	UFL1	O94874	794 aa		15.14	■□□□□ 0.01
CTNS-205	ENST00000467663	CSF1R	P07333	972 aa		15.14	■□□□□ 0.01
CTNS-205	ENST00000467663	TRIM27	P14373	513 aa		15.14	■□□□□ 0.01
CTNS-205	ENST00000467663	DPF2	Q92785	391 aa		15.14	■□□□□ 0.01
CTNS-205	ENST00000467663	GPR101	Q96P66	508 aa	Predicted RBP	15.14	■□□□□ 0.01
CTNS-205	ENST00000467663	DDX19B	Q9UMR2	479 aa		15.14	■□□□□ 0.01
CTNS-205	ENST00000467663	PSMD14	O00487	310 aa		15.13	■□□□□ 0.01
CTNS-205	ENST00000467663	ATP2B4	P23634	1241 aa		15.13	■□□□□ 0.01
CTNS-205	ENST00000467663	MVP	Q14764	893 aa	Known RBP	15.13	■□□□□ 0.01
CTNS-205	ENST00000467663	DOK7	Q18PE1	504 aa		15.13	■□□□□ 0.01
CTNS-205	ENST00000467663	PGAP2	Q9UHJ9	254 aa		15.13	■□□□□ 0.01
CTNS-205	ENST00000467663	CNOT7	Q9UIV1	285 aa	Known RBP	15.13	■□□□□ 0.01
CTNS-205	ENST00000467663	MINPP1	Q9UNW1	487 aa		15.13	■□□□□ 0.01
CTNS-205	ENST00000467663	RPS12	P25398	132 aa	Known RBP	15.12	■□□□□ 0.01
CTNS-205	ENST00000467663	KCNQ5	Q9NR82	932 aa		15.12	■□□□□ 0.01
CTNS-205	ENST00000467663	ZBTB12	Q9Y330	459 aa	Predicted RBP	15.12	■□□□□ 0.01
CTNS-205	ENST00000467663		H7C1D1	291 aa		15.11	■□□□□ 0.01
CTNS-205	ENST00000467663	ITGA6	P23229	1130 aa		15.11	■□□□□ 0.01
CTNS-205	ENST00000467663	HIRA	P54198	1017 aa	Predicted RBP	15.11	■□□□□ 0.01
CTNS-205	ENST00000467663	IRX6	P78412	446 aa	Predicted RBP	15.11	■□□□□ 0.01
CTNS-205	ENST00000467663	ZC3H15	Q8WU90	426 aa	Known RBP	15.11	■□□□□ 0.01
CTNS-205	ENST00000467663	CRBN	Q96SW2	442 aa		15.11	■□□□□ 0.01
CTNS-205	ENST00000467663	MKRN1	Q9UHC7	482 aa	Known RBP	15.11	■□□□□ 0.01
CTNS-205	ENST00000467663	CNTNAP1	P78357	1384 aa		15.11	■□□□□ 0.01
CTNS-205	ENST00000467663	MYH3	P11055	1940 aa		15.1	■□□□□ 0.01
CTNS-205	ENST00000467663	ALDH1L1	O75891	902 aa		15.1	■□□□□ 0.01
CTNS-205	ENST00000467663	VIL1	P09327	827 aa	Known RBP	15.1	■□□□□ 0.01
CTNS-205	ENST00000467663	IGHMBP2	P38935	993 aa	Known RBP	15.1	■□□□□ 0.01
CTNS-205	ENST00000467663	FOXO4	P98177	505 aa		15.1	■□□□□ 0.01
CTNS-205	ENST00000467663	FAM161A	Q3B820	660 aa		15.1	■□□□□ 0.01
CTNS-205	ENST00000467663	INTS3	Q68E01	1043 aa	Known RBP	15.1	■□□□□ 0.01
CTNS-205	ENST00000467663	MICALL2	Q8IY33	904 aa		15.1	■□□□□ 0.01
CTNS-205	ENST00000467663	SHTN1	A0MZ66	631 aa		15.09	■□□□□ 0.01
CTNS-205	ENST00000467663	WTIP	A6NIX2	430 aa	Predicted RBP	15.09	■□□□□ 0.01
CTNS-205	ENST00000467663		G3V3G9	751 aa		15.09	■□□□□ 0.01
CTNS-205	ENST00000467663	GRM8	O00222	908 aa		15.09	■□□□□ 0.01
CTNS-205	ENST00000467663	CCT4	P50991	539 aa	Known RBP	15.09	■□□□□ 0.01
CTNS-205	ENST00000467663	DCAF8	Q5TAQ9	597 aa		15.09	■□□□□ 0.01
CTNS-205	ENST00000467663	C20orf194	Q5TEA3	1177 aa		15.09	■□□□□ 0.01
CTNS-205	ENST00000467663	EXOC6	Q8TAG9	804 aa		15.09	■□□□□ 0.01
CTNS-205	ENST00000467663	TRPM4	Q8TD43	1214 aa		15.09	■□□□□ 0.01
CTNS-205	ENST00000467663	MED23	Q9ULK4	1368 aa		15.09	■□□□□ 0.01
CTNS-205	ENST00000467663	RASSF10	A6NK89	507 aa		15.08	■□□□□ 0
CTNS-205	ENST00000467663	TRAF5	O00463	557 aa		15.08	■□□□□ 0
CTNS-205	ENST00000467663	FMR1	Q06787	632 aa	Known RBP eCLIP	15.08	■□□□□ 0
CTNS-205	ENST00000467663	PODN	Q7Z5L7	613 aa		15.08	■□□□□ 0
CTNS-205	ENST00000467663	PANK1	Q8TE04	598 aa		15.08	■□□□□ 0

Retrieved 100 of 20,778 RNA–protein pairs in 11 ms