RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 SSH1Q8WYL5 1049 aa23.04■■□□□ 1.28
CGREF1-208ENST00000467539 MINPP1Q9UNW1 487 aa23.04■■□□□ 1.28
CGREF1-208ENST00000467539 DUOX1Q9NRD9 1551 aa23.03■■□□□ 1.28
CGREF1-208ENST00000467539 ITGBL1O95965 494 aaPredicted RBP23.03■■□□□ 1.28
CGREF1-208ENST00000467539 HTRA3P83110 453 aa23.03■■□□□ 1.28
CGREF1-208ENST00000467539 USP50Q70EL3 339 aaPredicted RBP23.03■■□□□ 1.28
CGREF1-208ENST00000467539 SRCIN1Q9C0H9 1055 aa23.03■■□□□ 1.28
CGREF1-208ENST00000467539 GPRC5DQ9NZD1 345 aa23.03■■□□□ 1.28
CGREF1-208ENST00000467539 XDHP47989 1333 aa23.03■■□□□ 1.28
CGREF1-208ENST00000467539 UFL1O94874 794 aa23.02■■□□□ 1.28
CGREF1-208ENST00000467539 ITGA6P23229 1130 aa23.02■■□□□ 1.28
CGREF1-208ENST00000467539 ATP2B4P23634 1241 aa23.02■■□□□ 1.28
CGREF1-208ENST00000467539 FOXO4P98177 505 aa23.02■■□□□ 1.28
CGREF1-208ENST00000467539 ALDH1L2Q3SY69 923 aa23.02■■□□□ 1.28
CGREF1-208ENST00000467539 SLC4A10Q6U841 1118 aa23.02■■□□□ 1.28
CGREF1-208ENST00000467539 GRM8O00222 908 aa23.01■■□□□ 1.27
CGREF1-208ENST00000467539 CT47B1P0C2W7 299 aaPredicted RBP23.01■■□□□ 1.27
CGREF1-208ENST00000467539 IGHMBP2P38935 993 aaKnown RBP23.01■■□□□ 1.27
CGREF1-208ENST00000467539 GMPSP49915 693 aaPredicted RBP23.01■■□□□ 1.27
CGREF1-208ENST00000467539 DOK7Q18PE1 504 aa23.01■■□□□ 1.27
CGREF1-208ENST00000467539 GPR101Q96P66 508 aaPredicted RBP23.01■■□□□ 1.27
CGREF1-208ENST00000467539 DBNDD1Q9H9R9 158 aa23.01■■□□□ 1.27
CGREF1-208ENST00000467539 C9orf78Q9NZ63 289 aaPredicted RBP23.01■■□□□ 1.27
CGREF1-208ENST00000467539 PTPRCP08575 1304 aa23.01■■□□□ 1.27
CGREF1-208ENST00000467539 CNTROBQ8N137 903 aa23■■□□□ 1.27
CGREF1-208ENST00000467539 BCL2L13Q9BXK5 485 aa23■■□□□ 1.27
CGREF1-208ENST00000467539 ADARB2Q9NS39 739 aaKnown RBP23■■□□□ 1.27
CGREF1-208ENST00000467539 ECE2O60344 883 aa22.99■■□□□ 1.27
CGREF1-208ENST00000467539 DPF2Q92785 391 aa22.99■■□□□ 1.27
CGREF1-208ENST00000467539 KLRG1Q96E93 195 aa22.99■■□□□ 1.27
CGREF1-208ENST00000467539 KCNQ5Q9NR82 932 aa22.99■■□□□ 1.27
CGREF1-208ENST00000467539 PASKQ96RG2 1323 aa22.99■■□□□ 1.27
CGREF1-208ENST00000467539 ANKRD18BA2A2Z9 1011 aa22.98■■□□□ 1.27
CGREF1-208ENST00000467539 G3V3G9 751 aa22.98■■□□□ 1.27
CGREF1-208ENST00000467539 PSMD14O00487 310 aa22.98■■□□□ 1.27
CGREF1-208ENST00000467539 FAM161AQ3B820 660 aa22.98■■□□□ 1.27
CGREF1-208ENST00000467539 DCAF8Q5TAQ9 597 aa22.98■■□□□ 1.27
CGREF1-208ENST00000467539 MPHOSPH8Q99549 860 aa22.98■■□□□ 1.27
CGREF1-208ENST00000467539 CNOT7Q9UIV1 285 aaKnown RBP22.98■■□□□ 1.27
CGREF1-208ENST00000467539 LTBP1Q14766 1721 aa22.97■■□□□ 1.27
CGREF1-208ENST00000467539 CCT4P50991 539 aaKnown RBP22.97■■□□□ 1.27
CGREF1-208ENST00000467539 IFIT5Q13325 482 aaKnown RBP22.97■■□□□ 1.27
CGREF1-208ENST00000467539 MAP1SQ66K74 1059 aaPredicted RBP22.97■■□□□ 1.27
CGREF1-208ENST00000467539 LMBR1LQ6UX01 489 aa22.97■■□□□ 1.27
CGREF1-208ENST00000467539 ANKRD2Q9GZV1 360 aa22.97■■□□□ 1.27
CGREF1-208ENST00000467539 LEMD3Q9Y2U8 911 aa22.97■■□□□ 1.27
CGREF1-208ENST00000467539 WTIPA6NIX2 430 aaPredicted RBP22.96■■□□□ 1.27
CGREF1-208ENST00000467539 VIL1P09327 827 aaKnown RBP22.96■■□□□ 1.27
CGREF1-208ENST00000467539 EPHA10Q5JZY3 1008 aa22.96■■□□□ 1.27
CGREF1-208ENST00000467539 CREBZFQ9NS37 354 aa22.96■■□□□ 1.27
CGREF1-208ENST00000467539 ZBTB12Q9Y330 459 aaPredicted RBP22.96■■□□□ 1.27
CGREF1-208ENST00000467539 MYH3P11055 1940 aa22.96■■□□□ 1.27
CGREF1-208ENST00000467539 H7C1D1 291 aa22.95■■□□□ 1.26
CGREF1-208ENST00000467539 UTYO14607 1347 aa22.95■■□□□ 1.26
CGREF1-208ENST00000467539 RPS12P25398 132 aaKnown RBP22.95■■□□□ 1.26
CGREF1-208ENST00000467539 PODNQ7Z5L7 613 aa22.95■■□□□ 1.26
CGREF1-208ENST00000467539 PGAP2Q9UHJ9 254 aa22.95■■□□□ 1.26
CGREF1-208ENST00000467539 BRPF1P55201 1214 aaPredicted RBP22.94■■□□□ 1.26
CGREF1-208ENST00000467539 ADAMTSL1Q8N6G6 1762 aa22.94■■□□□ 1.26
CGREF1-208ENST00000467539 NBPF7P0C2Y1 421 aaPredicted RBP22.93■■□□□ 1.26
CGREF1-208ENST00000467539 HIRAP54198 1017 aaPredicted RBP22.93■■□□□ 1.26
CGREF1-208ENST00000467539 CCDC57Q2TAC2 916 aa22.93■■□□□ 1.26
CGREF1-208ENST00000467539 JMYQ8N9B5 988 aa22.93■■□□□ 1.26
CGREF1-208ENST00000467539 ZC3H15Q8WU90 426 aaKnown RBP22.93■■□□□ 1.26
CGREF1-208ENST00000467539 SMC4Q9NTJ3 1288 aa22.93■■□□□ 1.26
CGREF1-208ENST00000467539 KAZALD1Q96I82 304 aa22.92■■□□□ 1.26
CGREF1-208ENST00000467539 CHMP3Q9Y3E7 222 aa22.92■■□□□ 1.26
CGREF1-208ENST00000467539 TMEM88BA6NKF7 163 aa22.91■■□□□ 1.26
CGREF1-208ENST00000467539 CHRNDQ07001 517 aa22.91■■□□□ 1.26
CGREF1-208ENST00000467539 MICALL2Q8IY33 904 aa22.91■■□□□ 1.26
CGREF1-208ENST00000467539 SUCLG2Q96I99 432 aa22.91■■□□□ 1.26
CGREF1-208ENST00000467539 MED23Q9ULK4 1368 aa22.9■■□□□ 1.26
CGREF1-208ENST00000467539 ZNF804BA4D1E1 1349 aa22.9■■□□□ 1.26
CGREF1-208ENST00000467539 USP44Q9H0E7 712 aa22.9■■□□□ 1.26
CGREF1-208ENST00000467539 SHTN1A0MZ66 631 aa22.89■■□□□ 1.25
CGREF1-208ENST00000467539 LDHAL6AQ6ZMR3 332 aa22.89■■□□□ 1.25
CGREF1-208ENST00000467539 AGBL3Q8NEM8 1001 aa22.89■■□□□ 1.25
CGREF1-208ENST00000467539 COA1Q9GZY4 146 aa22.89■■□□□ 1.25
CGREF1-208ENST00000467539 NOB1Q9ULX3 412 aaKnown RBP22.89■■□□□ 1.25
CGREF1-208ENST00000467539 USP17L3A6NCW0 530 aa22.88■■□□□ 1.25
CGREF1-208ENST00000467539 USP17L4A6NCW7 530 aa22.88■■□□□ 1.25
CGREF1-208ENST00000467539 RARSP54136 660 aaKnown RBP22.88■■□□□ 1.25
CGREF1-208ENST00000467539 RSBN1LQ6PCB5 846 aaPredicted RBP22.88■■□□□ 1.25
CGREF1-208ENST00000467539 USP17L1Q7RTZ2 530 aa22.88■■□□□ 1.25
CGREF1-208ENST00000467539 TXNRD3Q86VQ6 643 aa22.88■■□□□ 1.25
CGREF1-208ENST00000467539 TRPM4Q8TD43 1214 aa22.88■■□□□ 1.25
CGREF1-208ENST00000467539 ZNF594Q96JF6 807 aaPredicted RBP22.88■■□□□ 1.25
CGREF1-208ENST00000467539 RABL6Q3YEC7 729 aaPredicted RBP22.87■■□□□ 1.25
CGREF1-208ENST00000467539 TAF7LQ5H9L4 462 aa22.87■■□□□ 1.25
CGREF1-208ENST00000467539 SAMD7Q7Z3H4 446 aa22.87■■□□□ 1.25
CGREF1-208ENST00000467539 GMLQ99445 158 aa22.87■■□□□ 1.25
CGREF1-208ENST00000467539 C15orf52Q6ZUT6 534 aaKnown RBP22.86■■□□□ 1.25
CGREF1-208ENST00000467539 HELBQ8NG08 1087 aaPredicted RBP22.86■■□□□ 1.25
CGREF1-208ENST00000467539 BICC1Q9H694 974 aaKnown RBP22.86■■□□□ 1.25
CGREF1-208ENST00000467539 TAF5LO75529 589 aa22.85■■□□□ 1.25
CGREF1-208ENST00000467539 KCNJ4P48050 445 aa22.85■■□□□ 1.25
CGREF1-208ENST00000467539 API5Q9BZZ5 524 aaKnown RBP22.85■■□□□ 1.25
CGREF1-208ENST00000467539 CNNM1Q9NRU3 951 aa22.85■■□□□ 1.25
CGREF1-208ENST00000467539 ZNF280AP59817 542 aaPredicted RBP22.84■■□□□ 1.25
CGREF1-208ENST00000467539 FMR1Q06787 632 aaKnown RBP eCLIP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms