RNA–Protein interactions for RNA: ENST00000467472.1

SIMC1-206, Transcript of SUMO interacting motifs containing 1, humanhuman

TSL 5

Gene SIMC1, Length 364 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-206ENST00000467472 EYA3Q99504 573 aa30.06■■■□□ 2.4
SIMC1-206ENST00000467472 GBA2Q9HCG7 927 aaPredicted RBP30.06■■■□□ 2.4
SIMC1-206ENST00000467472 ATP5J2-PTCD1G3V325 749 aa30.05■■■□□ 2.4
SIMC1-206ENST00000467472 NEUROD2Q15784 382 aa30.05■■■□□ 2.4
SIMC1-206ENST00000467472 KCNQ5Q9NR82 932 aa30.04■■■□□ 2.4
SIMC1-206ENST00000467472 CCDC146Q8IYE0 955 aa30.03■■■□□ 2.4
SIMC1-206ENST00000467472 C2orf69Q8N8R5 385 aa30.03■■■□□ 2.4
SIMC1-206ENST00000467472 TBC1D16Q8TBP0 767 aa30.03■■■□□ 2.4
SIMC1-206ENST00000467472 DCPSQ96C86 337 aaKnown RBP30.03■■■□□ 2.4
SIMC1-206ENST00000467472 HYPKQ9NX55 129 aa30.03■■■□□ 2.4
SIMC1-206ENST00000467472 SAGE1Q9NXZ1 904 aa30.03■■■□□ 2.4
SIMC1-206ENST00000467472 LAS1LQ9Y4W2 734 aaKnown RBP30.03■■■□□ 2.4
SIMC1-206ENST00000467472 ADM5C9JUS6 153 aa30.02■■■□□ 2.4
SIMC1-206ENST00000467472 IRS4O14654 1257 aaPredicted RBP30.02■■■□□ 2.4
SIMC1-206ENST00000467472 RPS8P62241 208 aaKnown RBP30.02■■■□□ 2.4
SIMC1-206ENST00000467472 DOK7Q18PE1 504 aa30.02■■■□□ 2.4
SIMC1-206ENST00000467472 CCDC102AQ96A19 550 aa30.02■■■□□ 2.4
SIMC1-206ENST00000467472 ZNF609O15014 1411 aa30.02■■■□□ 2.4
SIMC1-206ENST00000467472 ANP32CO43423 234 aa30.01■■■□□ 2.39
SIMC1-206ENST00000467472 RUNDC1Q96C34 613 aa30.01■■■□□ 2.39
SIMC1-206ENST00000467472 PODXL2Q9NZ53 605 aa30.01■■■□□ 2.39
SIMC1-206ENST00000467472 VIL1P09327 827 aaKnown RBP30■■■□□ 2.39
SIMC1-206ENST00000467472 KIF4BQ2VIQ3 1234 aa30■■■□□ 2.39
SIMC1-206ENST00000467472 CFAP44Q96MT7 982 aa30■■■□□ 2.39
SIMC1-206ENST00000467472 RTL5Q5HYW3 569 aaPredicted RBP29.99■■■□□ 2.39
SIMC1-206ENST00000467472 RBM26Q5T8P6 1007 aaKnown RBP29.99■■■□□ 2.39
SIMC1-206ENST00000467472 KIF23Q02241 960 aaPredicted RBP29.98■■■□□ 2.39
SIMC1-206ENST00000467472 ZC3H12CQ9C0D7 883 aaKnown RBP29.98■■■□□ 2.39
SIMC1-206ENST00000467472 MYH3P11055 1940 aa29.97■■■□□ 2.39
SIMC1-206ENST00000467472 ZNF157P51786 506 aaPredicted RBP29.97■■■□□ 2.39
SIMC1-206ENST00000467472 DUSP27Q5VZP5 1158 aa29.97■■■□□ 2.39
SIMC1-206ENST00000467472 SULF1Q8IWU6 871 aa29.96■■■□□ 2.39
SIMC1-206ENST00000467472 ZBTB38Q8NAP3 1195 aaPredicted RBP29.96■■■□□ 2.39
SIMC1-206ENST00000467472 GGA3Q9NZ52 723 aa29.96■■■□□ 2.39
SIMC1-206ENST00000467472 SLC10A3P09131 477 aa29.95■■■□□ 2.39
SIMC1-206ENST00000467472 HSP90B1P14625 803 aaKnown RBP29.95■■■□□ 2.39
SIMC1-206ENST00000467472 PAPPA2Q9BXP8 1791 aa29.95■■■□□ 2.38
SIMC1-206ENST00000467472 SEC31BQ9NQW1 1179 aa29.94■■■□□ 2.38
SIMC1-206ENST00000467472 RNF186Q9NXI6 227 aa29.94■■■□□ 2.38
SIMC1-206ENST00000467472 ZNF646O15015 1829 aaPredicted RBP29.94■■■□□ 2.38
SIMC1-206ENST00000467472 UFL1O94874 794 aa29.93■■■□□ 2.38
SIMC1-206ENST00000467472 ZNF280AP59817 542 aaPredicted RBP29.93■■■□□ 2.38
SIMC1-206ENST00000467472 ASTN2O75129 1339 aaPredicted RBP29.93■■■□□ 2.38
SIMC1-206ENST00000467472 SPEF2Q9C093 1822 aa29.92■■■□□ 2.38
SIMC1-206ENST00000467472 RIC3Q7Z5B4 369 aa29.92■■■□□ 2.38
SIMC1-206ENST00000467472 AGBL3Q8NEM8 1001 aa29.92■■■□□ 2.38
SIMC1-206ENST00000467472 CDCA5Q96FF9 252 aa29.92■■■□□ 2.38
SIMC1-206ENST00000467472 MBIPQ9NS73 344 aa29.92■■■□□ 2.38
SIMC1-206ENST00000467472 GGA1Q9UJY5 639 aa29.92■■■□□ 2.38
SIMC1-206ENST00000467472 GOLGA2Q08379 1002 aa29.91■■■□□ 2.38
SIMC1-206ENST00000467472 WDR43Q15061 677 aaKnown RBP eCLIP29.91■■■□□ 2.38
SIMC1-206ENST00000467472 RSBN1LQ6PCB5 846 aaPredicted RBP29.91■■■□□ 2.38
SIMC1-206ENST00000467472 ANKIB1Q9P2G1 1089 aa29.91■■■□□ 2.38
SIMC1-206ENST00000467472 TRPA1O75762 1119 aa29.9■■■□□ 2.38
SIMC1-206ENST00000467472 CSRNP1Q96S65 589 aa29.9■■■□□ 2.38
SIMC1-206ENST00000467472 G3V3G9 751 aa29.89■■■□□ 2.38
SIMC1-206ENST00000467472 ZNF853P0CG23 659 aa29.89■■■□□ 2.38
SIMC1-206ENST00000467472 CCDC152Q4G0S7 254 aa29.89■■■□□ 2.38
SIMC1-206ENST00000467472 DCAF8Q5TAQ9 597 aa29.89■■■□□ 2.38
SIMC1-206ENST00000467472 REM2Q8IYK8 340 aaPredicted RBP29.89■■■□□ 2.38
SIMC1-206ENST00000467472 CCDC191Q8NCU4 936 aa29.89■■■□□ 2.38
SIMC1-206ENST00000467472 PCCAP05165 728 aaPredicted RBP29.88■■■□□ 2.37
SIMC1-206ENST00000467472 GMLQ99445 158 aa29.88■■■□□ 2.37
SIMC1-206ENST00000467472 PHAXQ9H814 394 aaKnown RBP29.88■■■□□ 2.37
SIMC1-206ENST00000467472 ADAMTS8Q9UP79 889 aa29.88■■■□□ 2.37
SIMC1-206ENST00000467472 PDE8AO60658 829 aa29.87■■■□□ 2.37
SIMC1-206ENST00000467472 FKBP1BP68106 108 aa29.87■■■□□ 2.37
SIMC1-206ENST00000467472 SCARF1Q14162 830 aa29.87■■■□□ 2.37
SIMC1-206ENST00000467472 ANGEL2Q5VTE6 544 aaKnown RBP29.87■■■□□ 2.37
SIMC1-206ENST00000467472 PITPNM2Q9BZ72 1349 aa29.87■■■□□ 2.37
SIMC1-206ENST00000467472 RASAL3Q86YV0 1011 aa29.86■■■□□ 2.37
SIMC1-206ENST00000467472 MYD88Q99836 296 aa29.86■■■□□ 2.37
SIMC1-206ENST00000467472 XDHP47989 1333 aa29.86■■■□□ 2.37
SIMC1-206ENST00000467472 MYOZ2Q9NPC6 264 aa29.84■■■□□ 2.37
SIMC1-206ENST00000467472 USP17L8P0C7I0 530 aa29.83■■■□□ 2.37
SIMC1-206ENST00000467472 DIEXFQ68CQ4 756 aaKnown RBP29.83■■■□□ 2.37
SIMC1-206ENST00000467472 PODNQ7Z5L7 613 aa29.83■■■□□ 2.37
SIMC1-206ENST00000467472 IFT57Q9NWB7 429 aa29.83■■■□□ 2.37
SIMC1-206ENST00000467472 CWC25Q9NXE8 425 aaPredicted RBP29.83■■■□□ 2.37
SIMC1-206ENST00000467472 CTU1Q7Z7A3 348 aaKnown RBP29.82■■■□□ 2.36
SIMC1-206ENST00000467472 ANKRD18AQ8IVF6 992 aa29.82■■■□□ 2.36
SIMC1-206ENST00000467472 USP17L3A6NCW0 530 aa29.81■■■□□ 2.36
SIMC1-206ENST00000467472 USP17L4A6NCW7 530 aa29.81■■■□□ 2.36
SIMC1-206ENST00000467472 ATP2B4P23634 1241 aa29.81■■■□□ 2.36
SIMC1-206ENST00000467472 USP17L1Q7RTZ2 530 aa29.81■■■□□ 2.36
SIMC1-206ENST00000467472 METTL22Q9BUU2 404 aaPredicted RBP29.81■■■□□ 2.36
SIMC1-206ENST00000467472 CCDC85AQ96PX6 553 aaPredicted RBP29.8■■■□□ 2.36
SIMC1-206ENST00000467472 GNAI1P63096 354 aa29.79■■■□□ 2.36
SIMC1-206ENST00000467472 JARID2Q92833 1246 aaPredicted RBP29.79■■■□□ 2.36
SIMC1-206ENST00000467472 MED23Q9ULK4 1368 aa29.78■■■□□ 2.36
SIMC1-206ENST00000467472 SOX10P56693 466 aa29.78■■■□□ 2.36
SIMC1-206ENST00000467472 ELL2O00472 640 aaPredicted RBP29.77■■■□□ 2.36
SIMC1-206ENST00000467472 DDX58O95786 925 aaKnown RBP29.77■■■□□ 2.36
SIMC1-206ENST00000467472 CALD1Q05682 793 aaKnown RBP29.77■■■□□ 2.36
SIMC1-206ENST00000467472 CDC5LQ99459 802 aaKnown RBP29.76■■■□□ 2.35
SIMC1-206ENST00000467472 PCDH10Q9P2E7 1040 aa29.76■■■□□ 2.35
SIMC1-206ENST00000467472 CTSWP56202 376 aa29.75■■■□□ 2.35
SIMC1-206ENST00000467472 C8orf58Q8NAV2 365 aa29.75■■■□□ 2.35
SIMC1-206ENST00000467472 CHMP4AQ9BY43 222 aa29.75■■■□□ 2.35
SIMC1-206ENST00000467472 MOB2Q70IA6 237 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms