RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 SUPT20HQ8NEM7 779 aa13.86□□□□□ -0.19
MSH5-212ENST00000467319 TBC1D16Q8TBP0 767 aa13.86□□□□□ -0.19
MSH5-212ENST00000467319 VPS33BQ9H267 617 aa13.86□□□□□ -0.19
MSH5-212ENST00000467319 MINPP1Q9UNW1 487 aa13.86□□□□□ -0.19
MSH5-212ENST00000467319 HDAC5Q9UQL6 1122 aa13.86□□□□□ -0.19
MSH5-212ENST00000467319 CHMP3Q9Y3E7 222 aa13.86□□□□□ -0.19
MSH5-212ENST00000467319 ZNF646O15015 1829 aaPredicted RBP13.85□□□□□ -0.19
MSH5-212ENST00000467319 WDR90Q96KV7 1748 aa13.85□□□□□ -0.19
MSH5-212ENST00000467319 PDE3AQ14432 1141 aa13.85□□□□□ -0.19
MSH5-212ENST00000467319 ZNF594Q96JF6 807 aaPredicted RBP13.85□□□□□ -0.19
MSH5-212ENST00000467319 POLLQ9UGP5 575 aa13.85□□□□□ -0.19
MSH5-212ENST00000467319 MED23Q9ULK4 1368 aa13.84□□□□□ -0.19
MSH5-212ENST00000467319 ZBTB7BO15156 539 aaPredicted RBP13.84□□□□□ -0.19
MSH5-212ENST00000467319 GNAI2P04899 355 aa13.84□□□□□ -0.19
MSH5-212ENST00000467319 MVPQ14764 893 aaKnown RBP13.84□□□□□ -0.19
MSH5-212ENST00000467319 AOC3Q16853 763 aa13.84□□□□□ -0.19
MSH5-212ENST00000467319 C20orf194Q5TEA3 1177 aa13.84□□□□□ -0.19
MSH5-212ENST00000467319 ZNF784Q8NCA9 323 aaPredicted RBP13.84□□□□□ -0.19
MSH5-212ENST00000467319 MPHOSPH8Q99549 860 aa13.84□□□□□ -0.19
MSH5-212ENST00000467319 NSFL1CQ9UNZ2 370 aaKnown RBP13.84□□□□□ -0.19
MSH5-212ENST00000467319 PSME4Q14997 1843 aa13.84□□□□□ -0.19
MSH5-212ENST00000467319 IRS2Q9Y4H2 1338 aa13.84□□□□□ -0.19
MSH5-212ENST00000467319 FZD9O00144 591 aa13.83□□□□□ -0.2
MSH5-212ENST00000467319 PPIP5K2O43314 1243 aa13.83□□□□□ -0.2
MSH5-212ENST00000467319 UFL1O94874 794 aa13.83□□□□□ -0.2
MSH5-212ENST00000467319 RRP1P56182 461 aaKnown RBP13.83□□□□□ -0.2
MSH5-212ENST00000467319 PTPN12Q05209 780 aaKnown RBP13.83□□□□□ -0.2
MSH5-212ENST00000467319 CHRNDQ07001 517 aa13.83□□□□□ -0.2
MSH5-212ENST00000467319 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.83□□□□□ -0.2
MSH5-212ENST00000467319 ANKIB1Q9P2G1 1089 aa13.83□□□□□ -0.2
MSH5-212ENST00000467319 GGA1Q9UJY5 639 aa13.83□□□□□ -0.2
MSH5-212ENST00000467319 ZNF541Q9H0D2 1346 aa13.83□□□□□ -0.2
MSH5-212ENST00000467319 ARAP2Q8WZ64 1704 aa13.82□□□□□ -0.2
MSH5-212ENST00000467319 SCN9AQ15858 1988 aa13.82□□□□□ -0.2
MSH5-212ENST00000467319 LDHAL6AQ6ZMR3 332 aa13.82□□□□□ -0.2
MSH5-212ENST00000467319 LARGE2Q8N3Y3 721 aa13.82□□□□□ -0.2
MSH5-212ENST00000467319 GPR101Q96P66 508 aaPredicted RBP13.82□□□□□ -0.2
MSH5-212ENST00000467319 PUS3Q9BZE2 481 aaKnown RBP13.82□□□□□ -0.2
MSH5-212ENST00000467319 ANKRD2Q9GZV1 360 aa13.82□□□□□ -0.2
MSH5-212ENST00000467319 RIPOR2Q9Y4F9 1068 aa13.82□□□□□ -0.2
MSH5-212ENST00000467319 ZNF609O15014 1411 aa13.81□□□□□ -0.2
MSH5-212ENST00000467319 WTIPA6NIX2 430 aaPredicted RBP13.81□□□□□ -0.2
MSH5-212ENST00000467319 ATP2B4P23634 1241 aa13.81□□□□□ -0.2
MSH5-212ENST00000467319 TAF7LQ5H9L4 462 aa13.81□□□□□ -0.2
MSH5-212ENST00000467319 VGLL2Q8N8G2 317 aa13.81□□□□□ -0.2
MSH5-212ENST00000467319 KLHDC4Q8TBB5 520 aa13.81□□□□□ -0.2
MSH5-212ENST00000467319 DDX19BQ9UMR2 479 aa13.81□□□□□ -0.2
MSH5-212ENST00000467319 LEMD3Q9Y2U8 911 aa13.81□□□□□ -0.2
MSH5-212ENST00000467319 COG6Q9Y2V7 657 aa13.81□□□□□ -0.2
MSH5-212ENST00000467319 GLTPD2A6NH11 291 aa13.8□□□□□ -0.2
MSH5-212ENST00000467319 C6orf229H3BNL8 230 aa13.8□□□□□ -0.2
MSH5-212ENST00000467319 CIAO1O76071 339 aa13.8□□□□□ -0.2
MSH5-212ENST00000467319 WASHC4Q2M389 1173 aa13.8□□□□□ -0.2
MSH5-212ENST00000467319 LRRC24Q50LG9 513 aa13.8□□□□□ -0.2
MSH5-212ENST00000467319 C15orf52Q6ZUT6 534 aaKnown RBP13.8□□□□□ -0.2
MSH5-212ENST00000467319 ATG9AQ7Z3C6 839 aa13.8□□□□□ -0.2
MSH5-212ENST00000467319 NIM1KQ8IY84 436 aa13.8□□□□□ -0.2
MSH5-212ENST00000467319 JDP2Q8WYK2 163 aa13.8□□□□□ -0.2
MSH5-212ENST00000467319 EYA3Q99504 573 aa13.8□□□□□ -0.2
MSH5-212ENST00000467319 C1orf115Q9H7X2 142 aa13.8□□□□□ -0.2
MSH5-212ENST00000467319 COPRSQ9NQ92 184 aa13.8□□□□□ -0.2
MSH5-212ENST00000467319 CNNM1Q9NRU3 951 aa13.8□□□□□ -0.2
MSH5-212ENST00000467319 ZBTB40Q9NUA8 1239 aa13.8□□□□□ -0.2
MSH5-212ENST00000467319 FBXO3Q9UK99 471 aa13.8□□□□□ -0.2
MSH5-212ENST00000467319 ZNF804BA4D1E1 1349 aa13.8□□□□□ -0.2
MSH5-212ENST00000467319 MROH5Q6ZUA9 1318 aa13.8□□□□□ -0.2
MSH5-212ENST00000467319 PNMA6EA0A0J9YXQ4 647 aa13.79□□□□□ -0.2
MSH5-212ENST00000467319 YDJCA8MPS7 323 aa13.79□□□□□ -0.2
MSH5-212ENST00000467319 EYA2O00167 538 aa13.79□□□□□ -0.2
MSH5-212ENST00000467319 SRGAP3O43295 1099 aa13.79□□□□□ -0.2
MSH5-212ENST00000467319 KLRK1P26718 216 aa13.79□□□□□ -0.2
MSH5-212ENST00000467319 POLA2Q14181 598 aa13.79□□□□□ -0.2
MSH5-212ENST00000467319 L3MBTL3Q96JM7 780 aaPredicted RBP13.79□□□□□ -0.2
MSH5-212ENST00000467319 ZNRF3Q9ULT6 936 aa13.79□□□□□ -0.2
MSH5-212ENST00000467319 KDM2BQ8NHM5 1336 aa13.79□□□□□ -0.2
MSH5-212ENST00000467319 CEP85Q6P2H3 762 aa13.78□□□□□ -0.2
MSH5-212ENST00000467319 HELBQ8NG08 1087 aaPredicted RBP13.78□□□□□ -0.2
MSH5-212ENST00000467319 SSH3Q8TE77 659 aa13.78□□□□□ -0.2
MSH5-212ENST00000467319 PA2G4Q9UQ80 394 aaKnown RBP13.78□□□□□ -0.2
MSH5-212ENST00000467319 SCN4AP35499 1836 aa13.78□□□□□ -0.2
MSH5-212ENST00000467319 SNAP23O00161 211 aa13.77□□□□□ -0.21
MSH5-212ENST00000467319 ECE2O60344 883 aa13.77□□□□□ -0.21
MSH5-212ENST00000467319 TAF5LO75529 589 aa13.77□□□□□ -0.21
MSH5-212ENST00000467319 TXNRD3Q86VQ6 643 aa13.77□□□□□ -0.21
MSH5-212ENST00000467319 GPC2Q8N158 579 aa13.77□□□□□ -0.21
MSH5-212ENST00000467319 ADAMTSL1Q8N6G6 1762 aa13.77□□□□□ -0.21
MSH5-212ENST00000467319 RIMBP2O15034 1052 aa13.76□□□□□ -0.21
MSH5-212ENST00000467319 PDE8BO95263 885 aa13.76□□□□□ -0.21
MSH5-212ENST00000467319 CXCL9Q07325 125 aa13.76□□□□□ -0.21
MSH5-212ENST00000467319 UBE4AQ14139 1066 aa13.76□□□□□ -0.21
MSH5-212ENST00000467319 METTL24Q5JXM2 366 aa13.76□□□□□ -0.21
MSH5-212ENST00000467319 ZNF526Q8TF50 670 aaPredicted RBP13.76□□□□□ -0.21
MSH5-212ENST00000467319 ZC3H12CQ9C0D7 883 aaKnown RBP13.76□□□□□ -0.21
MSH5-212ENST00000467319 DBNDD1Q9H9R9 158 aa13.76□□□□□ -0.21
MSH5-212ENST00000467319 GPBP1L1Q9HC44 474 aaPredicted RBP13.76□□□□□ -0.21
MSH5-212ENST00000467319 NMRK2Q9NPI5 230 aa13.76□□□□□ -0.21
MSH5-212ENST00000467319 POTECB2RU33 542 aa13.75□□□□□ -0.21
MSH5-212ENST00000467319 KIF3CO14782 793 aa13.75□□□□□ -0.21
MSH5-212ENST00000467319 DDNO94850 711 aaPredicted RBP13.75□□□□□ -0.21
MSH5-212ENST00000467319 FGFR2P21802 821 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms