RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 CAMTA2O94983 1202 aa11.63□□□□□ -0.55
APOBEC1-202ENST00000467171 SNX21Q969T3 373 aa11.63□□□□□ -0.55
APOBEC1-202ENST00000467171 ESYT1Q9BSJ8 1104 aa11.63□□□□□ -0.55
APOBEC1-202ENST00000467171 SIL1Q9H173 461 aa11.63□□□□□ -0.55
APOBEC1-202ENST00000467171 A0A0G2JS52 829 aa11.62□□□□□ -0.55
APOBEC1-202ENST00000467171 TRIM6-TRIM34B2RNG4 842 aa11.62□□□□□ -0.55
APOBEC1-202ENST00000467171 MYT1Q01538 1121 aa11.62□□□□□ -0.55
APOBEC1-202ENST00000467171 TNNI3KQ59H18 835 aa11.62□□□□□ -0.55
APOBEC1-202ENST00000467171 CLEC4GQ6UXB4 293 aa11.62□□□□□ -0.55
APOBEC1-202ENST00000467171 ATG9AQ7Z3C6 839 aa11.62□□□□□ -0.55
APOBEC1-202ENST00000467171 TICAM2Q86XR7 235 aa11.62□□□□□ -0.55
APOBEC1-202ENST00000467171 KLHDC4Q8TBB5 520 aa11.62□□□□□ -0.55
APOBEC1-202ENST00000467171 KIF2CQ99661 725 aa11.62□□□□□ -0.55
APOBEC1-202ENST00000467171 TBC1D2BQ9UPU7 963 aa11.62□□□□□ -0.55
APOBEC1-202ENST00000467171 FPGT-TNNI3KV9GXZ4 949 aa11.62□□□□□ -0.55
APOBEC1-202ENST00000467171 ZNF831Q5JPB2 1677 aa11.62□□□□□ -0.55
APOBEC1-202ENST00000467171 RREB1Q92766 1687 aa11.62□□□□□ -0.55
APOBEC1-202ENST00000467171 HSP90B1P14625 803 aaKnown RBP11.61□□□□□ -0.55
APOBEC1-202ENST00000467171 ATP5JP18859 108 aa11.61□□□□□ -0.55
APOBEC1-202ENST00000467171 TFCP2Q12800 502 aa11.61□□□□□ -0.55
APOBEC1-202ENST00000467171 CCDC57Q2TAC2 916 aa11.61□□□□□ -0.55
APOBEC1-202ENST00000467171 SEPT12Q8IYM1 358 aa11.61□□□□□ -0.55
APOBEC1-202ENST00000467171 LINC00116Q8NCU8 138 aa11.61□□□□□ -0.55
APOBEC1-202ENST00000467171 IL27Q8NEV9 243 aa11.61□□□□□ -0.55
APOBEC1-202ENST00000467171 RILPL2Q969X0 211 aa11.61□□□□□ -0.55
APOBEC1-202ENST00000467171 EVI5LQ96CN4 794 aa11.61□□□□□ -0.55
APOBEC1-202ENST00000467171 IL17RAQ96F46 866 aa11.61□□□□□ -0.55
APOBEC1-202ENST00000467171 FAM89AQ96GI7 184 aa11.61□□□□□ -0.55
APOBEC1-202ENST00000467171 ARXQ96QS3 562 aa11.61□□□□□ -0.55
APOBEC1-202ENST00000467171 TBC1D2Q9BYX2 928 aa11.61□□□□□ -0.55
APOBEC1-202ENST00000467171 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.61□□□□□ -0.55
APOBEC1-202ENST00000467171 UBN2Q6ZU65 1347 aa11.6□□□□□ -0.55
APOBEC1-202ENST00000467171 IRS4O14654 1257 aaPredicted RBP11.6□□□□□ -0.55
APOBEC1-202ENST00000467171 PDE8AO60658 829 aa11.6□□□□□ -0.55
APOBEC1-202ENST00000467171 GPTP24298 496 aa11.6□□□□□ -0.55
APOBEC1-202ENST00000467171 CTSWP56202 376 aa11.6□□□□□ -0.55
APOBEC1-202ENST00000467171 GPR153Q6NV75 609 aa11.6□□□□□ -0.55
APOBEC1-202ENST00000467171 CCDC8Q9H0W5 538 aaPredicted RBP11.6□□□□□ -0.55
APOBEC1-202ENST00000467171 QTRT2Q9H974 415 aaKnown RBP11.6□□□□□ -0.55
APOBEC1-202ENST00000467171 TRMT112Q9UI30 125 aaKnown RBP11.6□□□□□ -0.55
APOBEC1-202ENST00000467171 ZNF652Q9Y2D9 606 aa11.6□□□□□ -0.55
APOBEC1-202ENST00000467171 CHMP3Q9Y3E7 222 aa11.6□□□□□ -0.55
APOBEC1-202ENST00000467171 HIP1O00291 1037 aa11.59□□□□□ -0.55
APOBEC1-202ENST00000467171 RPS6KA4O75676 772 aa11.59□□□□□ -0.55
APOBEC1-202ENST00000467171 IFIT5Q13325 482 aaKnown RBP11.59□□□□□ -0.55
APOBEC1-202ENST00000467171 RABEP1Q15276 862 aa11.59□□□□□ -0.55
APOBEC1-202ENST00000467171 RTL5Q5HYW3 569 aaPredicted RBP11.59□□□□□ -0.55
APOBEC1-202ENST00000467171 TTLL11Q8NHH1 800 aa11.59□□□□□ -0.55
APOBEC1-202ENST00000467171 UTP14AQ9BVJ6 771 aaKnown RBP11.59□□□□□ -0.55
APOBEC1-202ENST00000467171 DBNLQ9UJU6 430 aaKnown RBP11.59□□□□□ -0.55
APOBEC1-202ENST00000467171 SH3TC1Q8TE82 1336 aa11.59□□□□□ -0.55
APOBEC1-202ENST00000467171 SGSM2O43147 1006 aa11.58□□□□□ -0.56
APOBEC1-202ENST00000467171 ANAPC15P60006 121 aa11.58□□□□□ -0.56
APOBEC1-202ENST00000467171 SUSD4Q5VX71 490 aa11.58□□□□□ -0.56
APOBEC1-202ENST00000467171 PTF1AQ7RTS3 328 aa11.58□□□□□ -0.56
APOBEC1-202ENST00000467171 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.58□□□□□ -0.56
APOBEC1-202ENST00000467171 RUFY2Q8WXA3 655 aa11.58□□□□□ -0.56
APOBEC1-202ENST00000467171 ANP32EQ9BTT0 268 aa11.58□□□□□ -0.56
APOBEC1-202ENST00000467171 SNRKQ9NRH2 765 aa11.58□□□□□ -0.56
APOBEC1-202ENST00000467171 TLR7Q9NYK1 1049 aaKnown RBP11.58□□□□□ -0.56
APOBEC1-202ENST00000467171 CEP126Q9P2H0 1117 aa11.58□□□□□ -0.56
APOBEC1-202ENST00000467171 RFX7Q2KHR2 1363 aa11.57□□□□□ -0.56
APOBEC1-202ENST00000467171 ANKRD18BA2A2Z9 1011 aa11.57□□□□□ -0.56
APOBEC1-202ENST00000467171 NTSR2O95665 410 aa11.57□□□□□ -0.56
APOBEC1-202ENST00000467171 MCCP23508 829 aa11.57□□□□□ -0.56
APOBEC1-202ENST00000467171 HMGB2P26583 209 aaKnown RBP11.57□□□□□ -0.56
APOBEC1-202ENST00000467171 SLC4A3P48751 1232 aa11.57□□□□□ -0.56
APOBEC1-202ENST00000467171 LRRC24Q50LG9 513 aa11.57□□□□□ -0.56
APOBEC1-202ENST00000467171 HSCBQ8IWL3 235 aa11.57□□□□□ -0.56
APOBEC1-202ENST00000467171 CCNL1Q9UK58 526 aaPredicted RBP11.57□□□□□ -0.56
APOBEC1-202ENST00000467171 AKAP2Q9Y2D5 859 aa11.57□□□□□ -0.56
APOBEC1-202ENST00000467171 RTL9Q8NET4 1388 aa11.56□□□□□ -0.56
APOBEC1-202ENST00000467171 NHSQ6T4R5 1651 aa11.56□□□□□ -0.56
APOBEC1-202ENST00000467171 AFDNP55196 1824 aaKnown RBP11.56□□□□□ -0.56
APOBEC1-202ENST00000467171 ITGA6P23229 1130 aa11.56□□□□□ -0.56
APOBEC1-202ENST00000467171 VARS2Q5ST30 1063 aaKnown RBP11.56□□□□□ -0.56
APOBEC1-202ENST00000467171 FAM196AQ6ZSG2 479 aa11.56□□□□□ -0.56
APOBEC1-202ENST00000467171 SYNE4Q8N205 404 aa11.56□□□□□ -0.56
APOBEC1-202ENST00000467171 HAUS7Q99871 368 aa11.56□□□□□ -0.56
APOBEC1-202ENST00000467171 DBNDD2Q9BQY9 259 aa11.56□□□□□ -0.56
APOBEC1-202ENST00000467171 DIAPH3Q9NSV4 1193 aa11.56□□□□□ -0.56
APOBEC1-202ENST00000467171 NARFQ9UHQ1 456 aa11.56□□□□□ -0.56
APOBEC1-202ENST00000467171 NIP7Q9Y221 180 aaKnown RBP eCLIP11.56□□□□□ -0.56
APOBEC1-202ENST00000467171 RIPOR2Q9Y4F9 1068 aa11.56□□□□□ -0.56
APOBEC1-202ENST00000467171 RAD50Q92878 1312 aa11.56□□□□□ -0.56
APOBEC1-202ENST00000467171 KIF3CO14782 793 aa11.55□□□□□ -0.56
APOBEC1-202ENST00000467171 MAP4K4O95819 1239 aaPredicted RBP11.55□□□□□ -0.56
APOBEC1-202ENST00000467171 TAF7LQ5H9L4 462 aa11.55□□□□□ -0.56
APOBEC1-202ENST00000467171 ZNF772Q68DY9 489 aaPredicted RBP11.55□□□□□ -0.56
APOBEC1-202ENST00000467171 ZNF594Q96JF6 807 aaPredicted RBP11.55□□□□□ -0.56
APOBEC1-202ENST00000467171 PUS3Q9BZE2 481 aaKnown RBP11.55□□□□□ -0.56
APOBEC1-202ENST00000467171 BOLA2Q9H3K6 86 aa11.55□□□□□ -0.56
APOBEC1-202ENST00000467171 GREM2Q9H772 168 aa11.55□□□□□ -0.56
APOBEC1-202ENST00000467171 ZNF609O15014 1411 aa11.54□□□□□ -0.56
APOBEC1-202ENST00000467171 A0A1B0GUL7 405 aa11.54□□□□□ -0.56
APOBEC1-202ENST00000467171 SLC27A3Q5K4L6 730 aa11.54□□□□□ -0.56
APOBEC1-202ENST00000467171 SLC10A5Q5PT55 438 aa11.54□□□□□ -0.56
APOBEC1-202ENST00000467171 KRT27Q7Z3Y8 459 aa11.54□□□□□ -0.56
APOBEC1-202ENST00000467171 LSG1Q9H089 658 aaKnown RBP11.54□□□□□ -0.56
APOBEC1-202ENST00000467171 ANO2Q9NQ90 1003 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms