RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 USP17L7P0C7H9 530 aa6.45□□□□□ -1.38
VPS13A-209ENST00000467124 RARAP10276 462 aa6.45□□□□□ -1.38
VPS13A-209ENST00000467124 EDN3P14138 238 aa6.45□□□□□ -1.38
VPS13A-209ENST00000467124 FGFR3P22607 806 aa6.45□□□□□ -1.38
VPS13A-209ENST00000467124 CES1P23141 567 aa6.45□□□□□ -1.38
VPS13A-209ENST00000467124 PCSK7Q16549 785 aa6.45□□□□□ -1.38
VPS13A-209ENST00000467124 GALNT12Q8IXK2 581 aa6.45□□□□□ -1.38
VPS13A-209ENST00000467124 OR13H1Q8NG92 308 aa6.45□□□□□ -1.38
VPS13A-209ENST00000467124 ABHD17AQ96GS6 310 aa6.45□□□□□ -1.38
VPS13A-209ENST00000467124 CRELD1Q96HD1 420 aa6.45□□□□□ -1.38
VPS13A-209ENST00000467124 BCO2Q9BYV7 579 aa6.45□□□□□ -1.38
VPS13A-209ENST00000467124 STRN4Q9NRL3 753 aa6.45□□□□□ -1.38
VPS13A-209ENST00000467124 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.45□□□□□ -1.38
VPS13A-209ENST00000467124 TRPA1O75762 1119 aa6.44□□□□□ -1.38
VPS13A-209ENST00000467124 PSAPP07602 524 aa6.44□□□□□ -1.38
VPS13A-209ENST00000467124 ACPPP15309 386 aa6.44□□□□□ -1.38
VPS13A-209ENST00000467124 SV2AQ7L0J3 742 aa6.44□□□□□ -1.38
VPS13A-209ENST00000467124 GTPBP3Q969Y2 492 aaKnown RBP6.44□□□□□ -1.38
VPS13A-209ENST00000467124 SHROOM4Q9ULL8 1493 aa6.43□□□□□ -1.38
VPS13A-209ENST00000467124 MMP20O60882 483 aa6.43□□□□□ -1.38
VPS13A-209ENST00000467124 KIF4AO95239 1232 aa6.43□□□□□ -1.38
VPS13A-209ENST00000467124 NFKB1P19838 968 aa6.43□□□□□ -1.38
VPS13A-209ENST00000467124 PLAURQ03405 335 aa6.43□□□□□ -1.38
VPS13A-209ENST00000467124 GRM2Q14416 872 aa6.43□□□□□ -1.38
VPS13A-209ENST00000467124 DRC1Q96MC2 740 aa6.43□□□□□ -1.38
VPS13A-209ENST00000467124 EHD4Q9H223 541 aa6.43□□□□□ -1.38
VPS13A-209ENST00000467124 TLR7Q9NYK1 1049 aaKnown RBP6.43□□□□□ -1.38
VPS13A-209ENST00000467124 ZFATQ9P243 1243 aa6.43□□□□□ -1.38
VPS13A-209ENST00000467124 GGT7Q9UJ14 662 aa6.43□□□□□ -1.38
VPS13A-209ENST00000467124 HCN2Q9UL51 889 aa6.43□□□□□ -1.38
VPS13A-209ENST00000467124 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.43□□□□□ -1.38
VPS13A-209ENST00000467124 CDC14CA4D256 554 aa6.42□□□□□ -1.38
VPS13A-209ENST00000467124 CD33P20138 364 aa6.42□□□□□ -1.38
VPS13A-209ENST00000467124 NRLP54845 237 aa6.42□□□□□ -1.38
VPS13A-209ENST00000467124 RACK1P63244 317 aaKnown RBP6.42□□□□□ -1.38
VPS13A-209ENST00000467124 GPLD1P80108 840 aa6.42□□□□□ -1.38
VPS13A-209ENST00000467124 ZNF468Q5VIY5 522 aaPredicted RBP6.42□□□□□ -1.38
VPS13A-209ENST00000467124 COPRSQ9NQ92 184 aa6.42□□□□□ -1.38
VPS13A-209ENST00000467124 METTL5Q9NRN9 209 aaKnown RBP6.42□□□□□ -1.38
VPS13A-209ENST00000467124 FAM8A1Q9UBU6 413 aa6.42□□□□□ -1.38
VPS13A-209ENST00000467124 NXF1Q9UBU9 619 aaKnown RBP6.42□□□□□ -1.38
VPS13A-209ENST00000467124 NSFL1CQ9UNZ2 370 aaKnown RBP6.42□□□□□ -1.38
VPS13A-209ENST00000467124 TRAK1Q9UPV9 953 aa6.42□□□□□ -1.38
VPS13A-209ENST00000467124 A0A1W2PP55 124 aa6.41□□□□□ -1.38
VPS13A-209ENST00000467124 POTECB2RU33 542 aa6.41□□□□□ -1.38
VPS13A-209ENST00000467124 LCE2BO14633 110 aa6.41□□□□□ -1.38
VPS13A-209ENST00000467124 SIN3BO75182 1162 aa6.41□□□□□ -1.38
VPS13A-209ENST00000467124 FBXO24O75426 580 aa6.41□□□□□ -1.38
VPS13A-209ENST00000467124 VSIG8P0DPA2 414 aa6.41□□□□□ -1.38
VPS13A-209ENST00000467124 FCGRTP55899 365 aa6.41□□□□□ -1.38
VPS13A-209ENST00000467124 HYAL2Q12891 473 aa6.41□□□□□ -1.38
VPS13A-209ENST00000467124 COL13A1Q5TAT6 717 aaPredicted RBP6.41□□□□□ -1.38
VPS13A-209ENST00000467124 KIAA0319Q5VV43 1072 aa6.41□□□□□ -1.38
VPS13A-209ENST00000467124 USP48Q86UV5 1035 aa6.41□□□□□ -1.38
VPS13A-209ENST00000467124 BHMTQ93088 406 aa6.41□□□□□ -1.38
VPS13A-209ENST00000467124 SLC30A3Q99726 388 aa6.41□□□□□ -1.38
VPS13A-209ENST00000467124 TINF2Q9BSI4 451 aa6.41□□□□□ -1.38
VPS13A-209ENST00000467124 TGIF2Q9GZN2 237 aa6.41□□□□□ -1.38
VPS13A-209ENST00000467124 SUV39H2Q9H5I1 410 aa6.41□□□□□ -1.38
VPS13A-209ENST00000467124 TTF2Q9UNY4 1162 aaKnown RBP6.41□□□□□ -1.38
VPS13A-209ENST00000467124 ARAFP10398 606 aa6.4□□□□□ -1.38
VPS13A-209ENST00000467124 DNAJA1P31689 397 aaKnown RBP6.4□□□□□ -1.38
VPS13A-209ENST00000467124 MAP2K3P46734 347 aa6.4□□□□□ -1.38
VPS13A-209ENST00000467124 MLLT1Q03111 559 aaPredicted RBP6.4□□□□□ -1.38
VPS13A-209ENST00000467124 TAF1CQ15572 869 aaPredicted RBP6.4□□□□□ -1.38
VPS13A-209ENST00000467124 MAP3K11Q16584 847 aa6.4□□□□□ -1.38
VPS13A-209ENST00000467124 PEAR1Q5VY43 1037 aaPredicted RBP6.4□□□□□ -1.38
VPS13A-209ENST00000467124 PRPF40BQ6NWY9 871 aaKnown RBP6.4□□□□□ -1.38
VPS13A-209ENST00000467124 DHX32Q7L7V1 743 aaKnown RBP6.4□□□□□ -1.38
VPS13A-209ENST00000467124 TRPM4Q8TD43 1214 aa6.4□□□□□ -1.38
VPS13A-209ENST00000467124 DHX38Q92620 1227 aaKnown RBP6.4□□□□□ -1.38
VPS13A-209ENST00000467124 NSUN5Q96P11 429 aaKnown RBP6.4□□□□□ -1.38
VPS13A-209ENST00000467124 TRIM56Q9BRZ2 755 aaKnown RBP6.4□□□□□ -1.38
VPS13A-209ENST00000467124 TANGO6Q9C0B7 1094 aa6.4□□□□□ -1.38
VPS13A-209ENST00000467124 IGFLR1Q9H665 355 aa6.4□□□□□ -1.38
VPS13A-209ENST00000467124 SALL4Q9UJQ4 1053 aa6.4□□□□□ -1.38
VPS13A-209ENST00000467124 H3BM21 787 aa6.39□□□□□ -1.39
VPS13A-209ENST00000467124 BMP4P12644 408 aa6.39□□□□□ -1.39
VPS13A-209ENST00000467124 XRCC5P13010 732 aaKnown RBP6.39□□□□□ -1.39
VPS13A-209ENST00000467124 MX2P20592 715 aa6.39□□□□□ -1.39
VPS13A-209ENST00000467124 TBC1D8BQ0IIM8 1120 aa6.39□□□□□ -1.39
VPS13A-209ENST00000467124 HS2ST1Q7LGA3 356 aa6.39□□□□□ -1.39
VPS13A-209ENST00000467124 NCAPG2Q86XI2 1143 aa6.39□□□□□ -1.39
VPS13A-209ENST00000467124 VWA5B2Q8N398 1253 aa6.39□□□□□ -1.39
VPS13A-209ENST00000467124 ANKRD24Q8TF21 1146 aa6.39□□□□□ -1.39
VPS13A-209ENST00000467124 TNFRSF25Q93038 417 aa6.39□□□□□ -1.39
VPS13A-209ENST00000467124 HHIPQ96QV1 700 aa6.39□□□□□ -1.39
VPS13A-209ENST00000467124 DNAJC2Q99543 621 aaKnown RBP6.39□□□□□ -1.39
VPS13A-209ENST00000467124 ZFYVE1Q9HBF4 777 aa6.39□□□□□ -1.39
VPS13A-209ENST00000467124 MBIPQ9NS73 344 aa6.39□□□□□ -1.39
VPS13A-209ENST00000467124 DDX41Q9UJV9 622 aaKnown RBP6.39□□□□□ -1.39
VPS13A-209ENST00000467124 PRR12Q9ULL5 1215 aa6.39□□□□□ -1.39
VPS13A-209ENST00000467124 AKAP2Q9Y2D5 859 aa6.39□□□□□ -1.39
VPS13A-209ENST00000467124 INPP5FQ9Y2H2 1132 aa6.39□□□□□ -1.39
VPS13A-209ENST00000467124 METTL12A8MUP2 240 aa6.38□□□□□ -1.39
VPS13A-209ENST00000467124 GPR25O00155 361 aa6.38□□□□□ -1.39
VPS13A-209ENST00000467124 ADH6P28332 368 aa6.38□□□□□ -1.39
VPS13A-209ENST00000467124 GSTT1P30711 240 aa6.38□□□□□ -1.39
VPS13A-209ENST00000467124 ST13P50502 369 aaKnown RBP6.38□□□□□ -1.39
VPS13A-209ENST00000467124 HFE2Q6ZVN8 426 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms