RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 RIPOR2Q9Y4F9 1068 aa18.86■□□□□ 0.61
NPHP4-205ENST00000466897 DUOX1Q9NRD9 1551 aa18.85■□□□□ 0.61
NPHP4-205ENST00000466897 IL15P40933 162 aaPredicted RBP18.85■□□□□ 0.61
NPHP4-205ENST00000466897 HSP90AB4PQ58FF6 505 aa18.85■□□□□ 0.61
NPHP4-205ENST00000466897 KLHDC4Q8TBB5 520 aa18.85■□□□□ 0.61
NPHP4-205ENST00000466897 CNNM1Q9NRU3 951 aa18.85■□□□□ 0.61
NPHP4-205ENST00000466897 ATG9AQ7Z3C6 839 aa18.84■□□□□ 0.61
NPHP4-205ENST00000466897 TMX4Q9H1E5 349 aaPredicted RBP18.84■□□□□ 0.61
NPHP4-205ENST00000466897 PODXL2Q9NZ53 605 aa18.84■□□□□ 0.61
NPHP4-205ENST00000466897 MINPP1Q9UNW1 487 aa18.84■□□□□ 0.61
NPHP4-205ENST00000466897 PA2G4Q9UQ80 394 aaKnown RBP18.84■□□□□ 0.61
NPHP4-205ENST00000466897 GOLGB1Q14789 3259 aaKnown RBP18.84■□□□□ 0.61
NPHP4-205ENST00000466897 SURF6O75683 361 aaKnown RBP18.83■□□□□ 0.6
NPHP4-205ENST00000466897 LRRC24Q50LG9 513 aa18.83■□□□□ 0.6
NPHP4-205ENST00000466897 CCDC93Q567U6 631 aa18.83■□□□□ 0.6
NPHP4-205ENST00000466897 PUS3Q9BZE2 481 aaKnown RBP18.83■□□□□ 0.6
NPHP4-205ENST00000466897 ANKRD2Q9GZV1 360 aa18.83■□□□□ 0.6
NPHP4-205ENST00000466897 RWDD1Q9H446 243 aaPredicted RBP18.83■□□□□ 0.6
NPHP4-205ENST00000466897 DCTPP1Q9H773 170 aa18.83■□□□□ 0.6
NPHP4-205ENST00000466897 BCS1LQ9Y276 419 aa18.83■□□□□ 0.6
NPHP4-205ENST00000466897 DICER1Q9UPY3 1922 aaKnown RBP18.82■□□□□ 0.6
NPHP4-205ENST00000466897 SBF1O95248 1867 aa18.82■□□□□ 0.6
NPHP4-205ENST00000466897 XDHP47989 1333 aa18.82■□□□□ 0.6
NPHP4-205ENST00000466897 C21orf2O43822 256 aa18.82■□□□□ 0.6
NPHP4-205ENST00000466897 CHRNDQ07001 517 aa18.82■□□□□ 0.6
NPHP4-205ENST00000466897 G3BP1Q13283 466 aaKnown RBP eCLIP18.82■□□□□ 0.6
NPHP4-205ENST00000466897 ERC1Q8IUD2 1116 aa18.82■□□□□ 0.6
NPHP4-205ENST00000466897 RTKN2Q8IZC4 609 aa18.82■□□□□ 0.6
NPHP4-205ENST00000466897 VGLL2Q8N8G2 317 aa18.82■□□□□ 0.6
NPHP4-205ENST00000466897 CCDC88AQ3V6T2 1871 aa18.82■□□□□ 0.6
NPHP4-205ENST00000466897 RAB11FIP3O75154 756 aa18.81■□□□□ 0.6
NPHP4-205ENST00000466897 SIL1Q9H173 461 aa18.81■□□□□ 0.6
NPHP4-205ENST00000466897 LTBP3Q9NS15 1303 aa18.8■□□□□ 0.6
NPHP4-205ENST00000466897 GCC1Q96CN9 775 aa18.8■□□□□ 0.6
NPHP4-205ENST00000466897 PSMD1Q99460 953 aa18.8■□□□□ 0.6
NPHP4-205ENST00000466897 RTFDC1Q9BY42 306 aaPredicted RBP18.8■□□□□ 0.6
NPHP4-205ENST00000466897 PDE8BO95263 885 aa18.79■□□□□ 0.6
NPHP4-205ENST00000466897 METTL24Q5JXM2 366 aa18.79■□□□□ 0.6
NPHP4-205ENST00000466897 MPNDQ8N594 471 aa18.79■□□□□ 0.6
NPHP4-205ENST00000466897 CEP126Q9P2H0 1117 aa18.79■□□□□ 0.6
NPHP4-205ENST00000466897 EXOC6BQ9Y2D4 811 aa18.79■□□□□ 0.6
NPHP4-205ENST00000466897 LEMD3Q9Y2U8 911 aa18.79■□□□□ 0.6
NPHP4-205ENST00000466897 SASH1O94885 1247 aa18.78■□□□□ 0.6
NPHP4-205ENST00000466897 YBX3P16989 372 aaKnown RBP eCLIP18.78■□□□□ 0.6
NPHP4-205ENST00000466897 ATP2B4P23634 1241 aa18.78■□□□□ 0.6
NPHP4-205ENST00000466897 GPSM2P81274 684 aa18.78■□□□□ 0.6
NPHP4-205ENST00000466897 DPP8Q6V1X1 898 aaPredicted RBP18.78■□□□□ 0.6
NPHP4-205ENST00000466897 SMC5Q8IY18 1101 aa18.78■□□□□ 0.6
NPHP4-205ENST00000466897 KIF1BPQ96EK5 621 aa18.78■□□□□ 0.6
NPHP4-205ENST00000466897 GPR108Q9NPR9 543 aa18.78■□□□□ 0.6
NPHP4-205ENST00000466897 ANKIB1Q9P2G1 1089 aa18.78■□□□□ 0.6
NPHP4-205ENST00000466897 NSFL1CQ9UNZ2 370 aaKnown RBP18.78■□□□□ 0.6
NPHP4-205ENST00000466897 ZNF609O15014 1411 aa18.77■□□□□ 0.6
NPHP4-205ENST00000466897 IGHDP01880 384 aa18.77■□□□□ 0.6
NPHP4-205ENST00000466897 FKBP4Q02790 459 aaKnown RBP eCLIP18.77■□□□□ 0.6
NPHP4-205ENST00000466897 OS9Q13438 667 aaPredicted RBP18.77■□□□□ 0.6
NPHP4-205ENST00000466897 UBE4AQ14139 1066 aa18.77■□□□□ 0.6
NPHP4-205ENST00000466897 PUM3Q15397 648 aaKnown RBP18.77■□□□□ 0.6
NPHP4-205ENST00000466897 OLFM4Q6UX06 510 aa18.77■□□□□ 0.6
NPHP4-205ENST00000466897 SLC51AQ86UW1 340 aa18.77■□□□□ 0.6
NPHP4-205ENST00000466897 SUPT20HQ8NEM7 779 aa18.77■□□□□ 0.6
NPHP4-205ENST00000466897 VPS33BQ9H267 617 aa18.77■□□□□ 0.6
NPHP4-205ENST00000466897 GGA1Q9UJY5 639 aa18.77■□□□□ 0.6
NPHP4-205ENST00000466897 MYH13Q9UKX3 1938 aa18.76■□□□□ 0.59
NPHP4-205ENST00000466897 GRIN3BO60391 1043 aa18.76■□□□□ 0.59
NPHP4-205ENST00000466897 FGFR2P21802 821 aa18.76■□□□□ 0.59
NPHP4-205ENST00000466897 C15orf52Q6ZUT6 534 aaKnown RBP18.76■□□□□ 0.59
NPHP4-205ENST00000466897 TBC1D16Q8TBP0 767 aa18.76■□□□□ 0.59
NPHP4-205ENST00000466897 RHPN1Q8TCX5 695 aa18.76■□□□□ 0.59
NPHP4-205ENST00000466897 WWC3Q9ULE0 1092 aa18.76■□□□□ 0.59
NPHP4-205ENST00000466897 AKAP2Q9Y2D5 859 aa18.76■□□□□ 0.59
NPHP4-205ENST00000466897 MED23Q9ULK4 1368 aa18.76■□□□□ 0.59
NPHP4-205ENST00000466897 PSME4Q14997 1843 aa18.76■□□□□ 0.59
NPHP4-205ENST00000466897 CHD4Q14839 1912 aa18.76■□□□□ 0.59
NPHP4-205ENST00000466897 ZNF804BA4D1E1 1349 aa18.75■□□□□ 0.59
NPHP4-205ENST00000466897 DCAF8L1A6NGE4 600 aa18.75■□□□□ 0.59
NPHP4-205ENST00000466897 TFCP2Q12800 502 aa18.75■□□□□ 0.59
NPHP4-205ENST00000466897 TAOK3Q9H2K8 898 aa18.75■□□□□ 0.59
NPHP4-205ENST00000466897 PPP4R2Q9NY27 417 aa18.75■□□□□ 0.59
NPHP4-205ENST00000466897 ZNF219Q9P2Y4 722 aaPredicted RBP18.75■□□□□ 0.59
NPHP4-205ENST00000466897 POLLQ9UGP5 575 aa18.75■□□□□ 0.59
NPHP4-205ENST00000466897 IRS2Q9Y4H2 1338 aa18.74■□□□□ 0.59
NPHP4-205ENST00000466897 NFKBIEO00221 500 aa18.74■□□□□ 0.59
NPHP4-205ENST00000466897 TAF5LO75529 589 aa18.74■□□□□ 0.59
NPHP4-205ENST00000466897 UFL1O94874 794 aa18.74■□□□□ 0.59
NPHP4-205ENST00000466897 GPR162Q16538 588 aa18.74■□□□□ 0.59
NPHP4-205ENST00000466897 HELBQ8NG08 1087 aaPredicted RBP18.74■□□□□ 0.59
NPHP4-205ENST00000466897 LPIN2Q92539 896 aa18.74■□□□□ 0.59
NPHP4-205ENST00000466897 EYA3Q99504 573 aa18.74■□□□□ 0.59
NPHP4-205ENST00000466897 LRRCC1Q9C099 1032 aa18.74■□□□□ 0.59
NPHP4-205ENST00000466897 KDM2BQ8NHM5 1336 aa18.74■□□□□ 0.59
NPHP4-205ENST00000466897 KCNJ4P48050 445 aa18.73■□□□□ 0.59
NPHP4-205ENST00000466897 ATP2B3Q16720 1220 aa18.73■□□□□ 0.59
NPHP4-205ENST00000466897 TIAM2Q8IVF5 1701 aa18.73■□□□□ 0.59
NPHP4-205ENST00000466897 CCDC136Q96JN2 1154 aa18.72■□□□□ 0.59
NPHP4-205ENST00000466897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.72■□□□□ 0.59
NPHP4-205ENST00000466897 C6orf229H3BNL8 230 aa18.71■□□□□ 0.59
NPHP4-205ENST00000466897 ZBTB22O15209 634 aa18.71■□□□□ 0.59
NPHP4-205ENST00000466897 IFIT1P09914 478 aaKnown RBP18.71■□□□□ 0.59
NPHP4-205ENST00000466897 SLC5A1P13866 664 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms