RNA–Protein interactions for RNA: ENST00000466199.1

EIF3B-208, Transcript of eukaryotic translation initiation factor 3 subunit B, human

TSL 2

Gene EIF3B, Length 734 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3B-208	ENST00000466199	PUS3	Q9BZE2	481 aa	Known RBP	11.22	□□□□□ -0.61
EIF3B-208	ENST00000466199	SCN7A	Q01118	1682 aa		11.21	□□□□□ -0.61
EIF3B-208	ENST00000466199	PPEF1	O14829	653 aa	Predicted RBP	11.21	□□□□□ -0.61
EIF3B-208	ENST00000466199	TFCP2	Q12800	502 aa		11.21	□□□□□ -0.61
EIF3B-208	ENST00000466199	LRRC24	Q50LG9	513 aa		11.21	□□□□□ -0.61
EIF3B-208	ENST00000466199	DALRD3	Q5D0E6	543 aa	Known RBP	11.21	□□□□□ -0.61
EIF3B-208	ENST00000466199	GPR108	Q9NPR9	543 aa		11.21	□□□□□ -0.61
EIF3B-208	ENST00000466199	MINPP1	Q9UNW1	487 aa		11.21	□□□□□ -0.61
EIF3B-208	ENST00000466199	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.21	□□□□□ -0.61
EIF3B-208	ENST00000466199	AFDN	P55196	1824 aa	Known RBP	11.21	□□□□□ -0.62
EIF3B-208	ENST00000466199	BCOR	Q6W2J9	1755 aa		11.21	□□□□□ -0.62
EIF3B-208	ENST00000466199	PDE8B	O95263	885 aa		11.2	□□□□□ -0.62
EIF3B-208	ENST00000466199	IFIT1	P09914	478 aa	Known RBP	11.2	□□□□□ -0.62
EIF3B-208	ENST00000466199	CHRND	Q07001	517 aa		11.2	□□□□□ -0.62
EIF3B-208	ENST00000466199	SOGA3	Q5TF21	947 aa		11.2	□□□□□ -0.62
EIF3B-208	ENST00000466199	ATG9A	Q7Z3C6	839 aa		11.2	□□□□□ -0.62
EIF3B-208	ENST00000466199	AACS	Q86V21	672 aa		11.2	□□□□□ -0.62
EIF3B-208	ENST00000466199	LNPK	Q9C0E8	428 aa		11.2	□□□□□ -0.62
EIF3B-208	ENST00000466199	IL1RAPL2	Q9NP60	686 aa		11.2	□□□□□ -0.62
EIF3B-208	ENST00000466199	LEMD3	Q9Y2U8	911 aa		11.2	□□□□□ -0.62
EIF3B-208	ENST00000466199	ATP6V0A2	Q9Y487	856 aa		11.2	□□□□□ -0.62
EIF3B-208	ENST00000466199	C4A	P0C0L4	1744 aa		11.2	□□□□□ -0.62
EIF3B-208	ENST00000466199	QSER1	Q2KHR3	1735 aa		11.2	□□□□□ -0.62
EIF3B-208	ENST00000466199	ANKRD36C	Q5JPF3	1778 aa		11.19	□□□□□ -0.62
EIF3B-208	ENST00000466199	KDM2B	Q8NHM5	1336 aa		11.19	□□□□□ -0.62
EIF3B-208	ENST00000466199		G3V3G9	751 aa		11.19	□□□□□ -0.62
EIF3B-208	ENST00000466199	SMARCA5	O60264	1052 aa	Predicted RBP	11.19	□□□□□ -0.62
EIF3B-208	ENST00000466199	SASH1	O94885	1247 aa		11.19	□□□□□ -0.62
EIF3B-208	ENST00000466199	SLC5A1	P13866	664 aa		11.19	□□□□□ -0.62
EIF3B-208	ENST00000466199	ATP2B4	P23634	1241 aa		11.19	□□□□□ -0.62
EIF3B-208	ENST00000466199	UBE4A	Q14139	1066 aa		11.19	□□□□□ -0.62
EIF3B-208	ENST00000466199	PUM3	Q15397	648 aa	Known RBP	11.19	□□□□□ -0.62
EIF3B-208	ENST00000466199	ATP2B3	Q16720	1220 aa		11.19	□□□□□ -0.62
EIF3B-208	ENST00000466199	CCDC158	Q5M9N0	1113 aa		11.19	□□□□□ -0.62
EIF3B-208	ENST00000466199	DCAF8	Q5TAQ9	597 aa		11.19	□□□□□ -0.62
EIF3B-208	ENST00000466199	MPND	Q8N594	471 aa		11.19	□□□□□ -0.62
EIF3B-208	ENST00000466199	HELB	Q8NG08	1087 aa	Predicted RBP	11.19	□□□□□ -0.62
EIF3B-208	ENST00000466199	XDH	P47989	1333 aa		11.18	□□□□□ -0.62
EIF3B-208	ENST00000466199	C6orf229	H3BNL8	230 aa		11.18	□□□□□ -0.62
EIF3B-208	ENST00000466199	TAF5L	O75529	589 aa		11.18	□□□□□ -0.62
EIF3B-208	ENST00000466199	TIMM10	P62072	90 aa		11.18	□□□□□ -0.62
EIF3B-208	ENST00000466199	CAVIN4	Q5BKX8	364 aa		11.18	□□□□□ -0.62
EIF3B-208	ENST00000466199	PRPF40B	Q6NWY9	871 aa	Known RBP	11.18	□□□□□ -0.62
EIF3B-208	ENST00000466199	DPP8	Q6V1X1	898 aa	Predicted RBP	11.18	□□□□□ -0.62
EIF3B-208	ENST00000466199	VPS37D	Q86XT2	251 aa		11.18	□□□□□ -0.62
EIF3B-208	ENST00000466199	RTKN2	Q8IZC4	609 aa		11.18	□□□□□ -0.62
EIF3B-208	ENST00000466199	SUPT20H	Q8NEM7	779 aa		11.18	□□□□□ -0.62
EIF3B-208	ENST00000466199	LPIN2	Q92539	896 aa		11.18	□□□□□ -0.62
EIF3B-208	ENST00000466199	GNL3L	Q9NVN8	582 aa	Known RBP	11.18	□□□□□ -0.62
EIF3B-208	ENST00000466199	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.18	□□□□□ -0.62
EIF3B-208	ENST00000466199	GGA1	Q9UJY5	639 aa		11.18	□□□□□ -0.62
EIF3B-208	ENST00000466199	ERC2	O15083	957 aa		11.17	□□□□□ -0.62
EIF3B-208	ENST00000466199	TNNI3K	Q59H18	835 aa		11.17	□□□□□ -0.62
EIF3B-208	ENST00000466199	PELP1	Q8IZL8	1130 aa	Known RBP	11.17	□□□□□ -0.62
EIF3B-208	ENST00000466199	EYA3	Q99504	573 aa		11.17	□□□□□ -0.62
EIF3B-208	ENST00000466199	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.17	□□□□□ -0.62
EIF3B-208	ENST00000466199	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.17	□□□□□ -0.62
EIF3B-208	ENST00000466199	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.17	□□□□□ -0.62
EIF3B-208	ENST00000466199	BCS1L	Q9Y276	419 aa		11.17	□□□□□ -0.62
EIF3B-208	ENST00000466199	FPGT-TNNI3K	V9GXZ4	949 aa		11.17	□□□□□ -0.62
EIF3B-208	ENST00000466199	C10orf71	Q711Q0	1435 aa		11.17	□□□□□ -0.62
EIF3B-208	ENST00000466199	ZNF804B	A4D1E1	1349 aa		11.16	□□□□□ -0.62
EIF3B-208	ENST00000466199		A0A1B0GUL7	405 aa		11.16	□□□□□ -0.62
EIF3B-208	ENST00000466199	C21orf2	O43822	256 aa		11.16	□□□□□ -0.62
EIF3B-208	ENST00000466199	KCNA3	P22001	575 aa		11.16	□□□□□ -0.62
EIF3B-208	ENST00000466199	RGS3	P49796	1198 aa		11.16	□□□□□ -0.62
EIF3B-208	ENST00000466199	CCDC93	Q567U6	631 aa		11.16	□□□□□ -0.62
EIF3B-208	ENST00000466199	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.16	□□□□□ -0.62
EIF3B-208	ENST00000466199	EAF2	Q96CJ1	260 aa	Predicted RBP	11.16	□□□□□ -0.62
EIF3B-208	ENST00000466199	SYT17	Q9BSW7	474 aa		11.16	□□□□□ -0.62
EIF3B-208	ENST00000466199	ECHDC1	Q9NTX5	307 aa		11.16	□□□□□ -0.62
EIF3B-208	ENST00000466199	PODXL2	Q9NZ53	605 aa		11.16	□□□□□ -0.62
EIF3B-208	ENST00000466199	TUBGCP6	Q96RT7	1819 aa		11.16	□□□□□ -0.62
EIF3B-208	ENST00000466199	CASZ1	Q86V15	1759 aa		11.16	□□□□□ -0.62
EIF3B-208	ENST00000466199	DCAF8L1	A6NGE4	600 aa		11.15	□□□□□ -0.62
EIF3B-208	ENST00000466199	FRAT2	O75474	233 aa	Predicted RBP	11.15	□□□□□ -0.62
EIF3B-208	ENST00000466199	UFL1	O94874	794 aa		11.15	□□□□□ -0.62
EIF3B-208	ENST00000466199	MX1	P20591	662 aa		11.15	□□□□□ -0.62
EIF3B-208	ENST00000466199	GPSM2	P81274	684 aa		11.15	□□□□□ -0.62
EIF3B-208	ENST00000466199	TTC39A	Q5SRH9	613 aa		11.15	□□□□□ -0.62
EIF3B-208	ENST00000466199	XAGE2	Q96GT9	111 aa		11.15	□□□□□ -0.62
EIF3B-208	ENST00000466199	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.15	□□□□□ -0.62
EIF3B-208	ENST00000466199	UQCRFS1P1	P0C7P4	283 aa		11.14	□□□□□ -0.63
EIF3B-208	ENST00000466199	HIBADH	P31937	336 aa	Known RBP	11.14	□□□□□ -0.63
EIF3B-208	ENST00000466199	WASHC4	Q2M389	1173 aa		11.14	□□□□□ -0.63
EIF3B-208	ENST00000466199	TBC1D16	Q8TBP0	767 aa		11.14	□□□□□ -0.63
EIF3B-208	ENST00000466199	C7orf43	Q8WVR3	580 aa		11.14	□□□□□ -0.63
EIF3B-208	ENST00000466199	COL24A1	Q17RW2	1714 aa		11.14	□□□□□ -0.63
EIF3B-208	ENST00000466199	TTC41P	Q6P2S7	1318 aa		11.13	□□□□□ -0.63
EIF3B-208	ENST00000466199	GLRX3	O76003	335 aa	Known RBP	11.13	□□□□□ -0.63
EIF3B-208	ENST00000466199	FGFR2	P21802	821 aa		11.13	□□□□□ -0.63
EIF3B-208	ENST00000466199	PDE1A	P54750	535 aa		11.13	□□□□□ -0.63
EIF3B-208	ENST00000466199	ZNF804A	Q7Z570	1209 aa		11.13	□□□□□ -0.63
EIF3B-208	ENST00000466199	VGLL2	Q8N8G2	317 aa		11.13	□□□□□ -0.63
EIF3B-208	ENST00000466199	DBNDD2	Q9BQY9	259 aa		11.13	□□□□□ -0.63
EIF3B-208	ENST00000466199	VPS33B	Q9H267	617 aa		11.13	□□□□□ -0.63
EIF3B-208	ENST00000466199	STAP2	Q9UGK3	403 aa		11.13	□□□□□ -0.63
EIF3B-208	ENST00000466199	WWC3	Q9ULE0	1092 aa		11.13	□□□□□ -0.63
EIF3B-208	ENST00000466199	RIMBP2	O15034	1052 aa		11.12	□□□□□ -0.63
EIF3B-208	ENST00000466199	ATP5J	P18859	108 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms