RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 ZC3H12CQ9C0D7 883 aaKnown RBP11.12□□□□□ -0.63
DDR1-242ENST00000465966 EGFRP00533 1210 aa11.11□□□□□ -0.63
DDR1-242ENST00000465966 RIPK4P57078 832 aa11.11□□□□□ -0.63
DDR1-242ENST00000465966 SF3B3Q15393 1217 aaKnown RBP11.11□□□□□ -0.63
DDR1-242ENST00000465966 DOK7Q18PE1 504 aa11.11□□□□□ -0.63
DDR1-242ENST00000465966 CCDC146Q8IYE0 955 aa11.11□□□□□ -0.63
DDR1-242ENST00000465966 GGA3Q9NZ52 723 aa11.11□□□□□ -0.63
DDR1-242ENST00000465966 POLLQ9UGP5 575 aa11.11□□□□□ -0.63
DDR1-242ENST00000465966 HDAC9Q9UKV0 1011 aa11.11□□□□□ -0.63
DDR1-242ENST00000465966 NUP98P52948 1817 aa11.1□□□□□ -0.63
DDR1-242ENST00000465966 VIL1P09327 827 aaKnown RBP11.1□□□□□ -0.63
DDR1-242ENST00000465966 HSP90B1P14625 803 aaKnown RBP11.1□□□□□ -0.63
DDR1-242ENST00000465966 FKBP1BP68106 108 aa11.1□□□□□ -0.63
DDR1-242ENST00000465966 GPSM2P81274 684 aa11.1□□□□□ -0.63
DDR1-242ENST00000465966 CELF1Q92879 486 aaKnown RBP11.1□□□□□ -0.63
DDR1-242ENST00000465966 CDCA5Q96FF9 252 aa11.1□□□□□ -0.63
DDR1-242ENST00000465966 FAM89AQ96GI7 184 aa11.1□□□□□ -0.63
DDR1-242ENST00000465966 RPS8P62241 208 aaKnown RBP11.09□□□□□ -0.63
DDR1-242ENST00000465966 ANKRD13DQ6ZTN6 518 aa11.09□□□□□ -0.63
DDR1-242ENST00000465966 PLBD2Q8NHP8 589 aa11.09□□□□□ -0.63
DDR1-242ENST00000465966 TBC1D16Q8TBP0 767 aa11.09□□□□□ -0.63
DDR1-242ENST00000465966 KCNQ5Q9NR82 932 aa11.09□□□□□ -0.63
DDR1-242ENST00000465966 ANKIB1Q9P2G1 1089 aa11.09□□□□□ -0.63
DDR1-242ENST00000465966 HPS5Q9UPZ3 1129 aa11.09□□□□□ -0.63
DDR1-242ENST00000465966 RTL9Q8NET4 1388 aa11.08□□□□□ -0.64
DDR1-242ENST00000465966 SCARF1Q14162 830 aa11.08□□□□□ -0.64
DDR1-242ENST00000465966 ANGEL2Q5VTE6 544 aaKnown RBP11.08□□□□□ -0.64
DDR1-242ENST00000465966 RASAL3Q86YV0 1011 aa11.08□□□□□ -0.64
DDR1-242ENST00000465966 AGBL3Q8NEM8 1001 aa11.08□□□□□ -0.64
DDR1-242ENST00000465966 ZNF428Q96B54 188 aa11.08□□□□□ -0.64
DDR1-242ENST00000465966 KDM3BQ7LBC6 1761 aa11.08□□□□□ -0.64
DDR1-242ENST00000465966 ATP5J2-PTCD1G3V325 749 aa11.07□□□□□ -0.64
DDR1-242ENST00000465966 IRS4O14654 1257 aaPredicted RBP11.07□□□□□ -0.64
DDR1-242ENST00000465966 UFL1O94874 794 aa11.07□□□□□ -0.64
DDR1-242ENST00000465966 ZNF280AP59817 542 aaPredicted RBP11.07□□□□□ -0.64
DDR1-242ENST00000465966 RTL5Q5HYW3 569 aaPredicted RBP11.07□□□□□ -0.64
DDR1-242ENST00000465966 HDGFL1Q5TGJ6 251 aa11.07□□□□□ -0.64
DDR1-242ENST00000465966 RSBN1LQ6PCB5 846 aaPredicted RBP11.07□□□□□ -0.64
DDR1-242ENST00000465966 ISCA1Q9BUE6 129 aa11.07□□□□□ -0.64
DDR1-242ENST00000465966 PODXL2Q9NZ53 605 aa11.07□□□□□ -0.64
DDR1-242ENST00000465966 CHPF2Q9P2E5 772 aa11.07□□□□□ -0.64
DDR1-242ENST00000465966 DBF4Q9UBU7 674 aaPredicted RBP11.07□□□□□ -0.64
DDR1-242ENST00000465966 GGA1Q9UJY5 639 aa11.07□□□□□ -0.64
DDR1-242ENST00000465966 CASP8AP2Q9UKL3 1982 aa11.07□□□□□ -0.64
DDR1-242ENST00000465966 APAF1O14727 1248 aa11.06□□□□□ -0.64
DDR1-242ENST00000465966 TBC1D8O95759 1140 aa11.06□□□□□ -0.64
DDR1-242ENST00000465966 USP17L8P0C7I0 530 aa11.06□□□□□ -0.64
DDR1-242ENST00000465966 TMPOP42166 694 aaKnown RBP11.06□□□□□ -0.64
DDR1-242ENST00000465966 GCC1Q96CN9 775 aa11.06□□□□□ -0.64
DDR1-242ENST00000465966 MYOZ2Q9NPC6 264 aa11.06□□□□□ -0.64
DDR1-242ENST00000465966 HYPKQ9NX55 129 aa11.06□□□□□ -0.64
DDR1-242ENST00000465966 SALL2Q9Y467 1007 aaPredicted RBP11.06□□□□□ -0.64
DDR1-242ENST00000465966 LAS1LQ9Y4W2 734 aaKnown RBP11.06□□□□□ -0.64
DDR1-242ENST00000465966 ZNF521Q96K83 1311 aa11.06□□□□□ -0.64
DDR1-242ENST00000465966 PITPNM2Q9BZ72 1349 aa11.06□□□□□ -0.64
DDR1-242ENST00000465966 HOXB7P09629 217 aa11.05□□□□□ -0.64
DDR1-242ENST00000465966 NF2P35240 595 aa11.05□□□□□ -0.64
DDR1-242ENST00000465966 TRIM28Q13263 835 aaKnown RBP11.05□□□□□ -0.64
DDR1-242ENST00000465966 TTLL12Q14166 644 aaPredicted RBP11.05□□□□□ -0.64
DDR1-242ENST00000465966 ZBTB38Q8NAP3 1195 aaPredicted RBP11.05□□□□□ -0.64
DDR1-242ENST00000465966 ZNF296Q8WUU4 475 aaPredicted RBP11.05□□□□□ -0.64
DDR1-242ENST00000465966 RUNDC1Q96C34 613 aa11.05□□□□□ -0.64
DDR1-242ENST00000465966 DUOX1Q9NRD9 1551 aa11.05□□□□□ -0.64
DDR1-242ENST00000465966 DLG5Q8TDM6 1919 aa11.05□□□□□ -0.64
DDR1-242ENST00000465966 ASTN2O75129 1339 aaPredicted RBP11.05□□□□□ -0.64
DDR1-242ENST00000465966 USP17L3A6NCW0 530 aa11.04□□□□□ -0.64
DDR1-242ENST00000465966 USP17L4A6NCW7 530 aa11.04□□□□□ -0.64
DDR1-242ENST00000465966 CHL1O00533 1208 aa11.04□□□□□ -0.64
DDR1-242ENST00000465966 SREBF2Q12772 1141 aa11.04□□□□□ -0.64
DDR1-242ENST00000465966 NEUROD2Q15784 382 aa11.04□□□□□ -0.64
DDR1-242ENST00000465966 CCDC152Q4G0S7 254 aa11.04□□□□□ -0.64
DDR1-242ENST00000465966 NOM1Q5C9Z4 860 aaKnown RBP11.04□□□□□ -0.64
DDR1-242ENST00000465966 FBXO46Q6PJ61 603 aaPredicted RBP11.04□□□□□ -0.64
DDR1-242ENST00000465966 USP17L1Q7RTZ2 530 aa11.04□□□□□ -0.64
DDR1-242ENST00000465966 RIC3Q7Z5B4 369 aa11.04□□□□□ -0.64
DDR1-242ENST00000465966 PODNQ7Z5L7 613 aa11.04□□□□□ -0.64
DDR1-242ENST00000465966 OGFOD1Q8N543 542 aa11.04□□□□□ -0.64
DDR1-242ENST00000465966 UBE2Q2LH0YL09 131 aa11.03□□□□□ -0.64
DDR1-242ENST00000465966 GPR25O00155 361 aa11.03□□□□□ -0.64
DDR1-242ENST00000465966 ATP2B4P23634 1241 aa11.03□□□□□ -0.64
DDR1-242ENST00000465966 TM4SF4P48230 202 aa11.03□□□□□ -0.64
DDR1-242ENST00000465966 GOLGA2Q08379 1002 aa11.03□□□□□ -0.64
DDR1-242ENST00000465966 KRT24Q2M2I5 525 aa11.03□□□□□ -0.64
DDR1-242ENST00000465966 XDHP47989 1333 aa11.03□□□□□ -0.64
DDR1-242ENST00000465966 FKTNO75072 461 aa11.02□□□□□ -0.65
DDR1-242ENST00000465966 MOB2Q70IA6 237 aa11.02□□□□□ -0.65
DDR1-242ENST00000465966 ANKRD18AQ8IVF6 992 aa11.02□□□□□ -0.65
DDR1-242ENST00000465966 GMLQ99445 158 aa11.02□□□□□ -0.65
DDR1-242ENST00000465966 SEC31BQ9NQW1 1179 aa11.02□□□□□ -0.65
DDR1-242ENST00000465966 ANKRD36CQ5JPF3 1778 aa11.02□□□□□ -0.65
DDR1-242ENST00000465966 ZNF609O15014 1411 aa11.01□□□□□ -0.65
DDR1-242ENST00000465966 PDE8AO60658 829 aa11.01□□□□□ -0.65
DDR1-242ENST00000465966 ALDH1A1P00352 501 aa11.01□□□□□ -0.65
DDR1-242ENST00000465966 MMP14P50281 582 aa11.01□□□□□ -0.65
DDR1-242ENST00000465966 PRAMEF18Q5VWM3 479 aa11.01□□□□□ -0.65
DDR1-242ENST00000465966 ARMC9Q7Z3E5 817 aa11.01□□□□□ -0.65
DDR1-242ENST00000465966 CDCA7LQ96GN5 454 aa11.01□□□□□ -0.65
DDR1-242ENST00000465966 PCCAP05165 728 aaPredicted RBP11□□□□□ -0.65
DDR1-242ENST00000465966 MKRN3Q13064 507 aaKnown RBP11□□□□□ -0.65
DDR1-242ENST00000465966 NBPF9Q3BBW0 867 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms