RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 LDHAL6AQ6ZMR3 332 aa22.99■■□□□ 1.27
HOXA9-203ENST00000465941 CHMP4BQ9H444 224 aaKnown RBP22.99■■□□□ 1.27
HOXA9-203ENST00000465941 ZNF277Q9NRM2 450 aaPredicted RBP22.99■■□□□ 1.27
HOXA9-203ENST00000465941 RNF181Q9P0P0 153 aa22.99■■□□□ 1.27
HOXA9-203ENST00000465941 ANKIB1Q9P2G1 1089 aa22.99■■□□□ 1.27
HOXA9-203ENST00000465941 RFX5P48382 616 aaPredicted RBP22.98■■□□□ 1.27
HOXA9-203ENST00000465941 XDHP47989 1333 aa22.98■■□□□ 1.27
HOXA9-203ENST00000465941 IARSP41252 1262 aaKnown RBP22.97■■□□□ 1.27
HOXA9-203ENST00000465941 ANKRD2Q9GZV1 360 aa22.97■■□□□ 1.27
HOXA9-203ENST00000465941 ZBTB40Q9NUA8 1239 aa22.97■■□□□ 1.27
HOXA9-203ENST00000465941 POLLQ9UGP5 575 aa22.97■■□□□ 1.27
HOXA9-203ENST00000465941 PTPN12Q05209 780 aaKnown RBP22.96■■□□□ 1.27
HOXA9-203ENST00000465941 TBC1D16Q8TBP0 767 aa22.96■■□□□ 1.27
HOXA9-203ENST00000465941 CNNM1Q9NRU3 951 aa22.96■■□□□ 1.27
HOXA9-203ENST00000465941 GGA1Q9UJY5 639 aa22.96■■□□□ 1.27
HOXA9-203ENST00000465941 RIPOR2Q9Y4F9 1068 aa22.96■■□□□ 1.27
HOXA9-203ENST00000465941 CHD4Q14839 1912 aa22.96■■□□□ 1.27
HOXA9-203ENST00000465941 C6orf229H3BNL8 230 aa22.95■■□□□ 1.26
HOXA9-203ENST00000465941 SRGAP3O43295 1099 aa22.95■■□□□ 1.26
HOXA9-203ENST00000465941 SBF1O95248 1867 aa22.95■■□□□ 1.26
HOXA9-203ENST00000465941 ATP2B4P23634 1241 aa22.95■■□□□ 1.26
HOXA9-203ENST00000465941 CHRNDQ07001 517 aa22.95■■□□□ 1.26
HOXA9-203ENST00000465941 KLHDC4Q8TBB5 520 aa22.95■■□□□ 1.26
HOXA9-203ENST00000465941 PUS3Q9BZE2 481 aaKnown RBP22.95■■□□□ 1.26
HOXA9-203ENST00000465941 ZC3H4Q9UPT8 1303 aaKnown RBP22.95■■□□□ 1.26
HOXA9-203ENST00000465941 YY1P25490 414 aa22.94■■□□□ 1.26
HOXA9-203ENST00000465941 ATP8B2P98198 1209 aa22.94■■□□□ 1.26
HOXA9-203ENST00000465941 WASHC4Q2M389 1173 aa22.94■■□□□ 1.26
HOXA9-203ENST00000465941 FBXO3Q9UK99 471 aa22.94■■□□□ 1.26
HOXA9-203ENST00000465941 LEMD3Q9Y2U8 911 aa22.94■■□□□ 1.26
HOXA9-203ENST00000465941 DUOX1Q9NRD9 1551 aa22.93■■□□□ 1.26
HOXA9-203ENST00000465941 UFL1O94874 794 aa22.93■■□□□ 1.26
HOXA9-203ENST00000465941 KIAA2012Q0VF49 1180 aa22.93■■□□□ 1.26
HOXA9-203ENST00000465941 EYA3Q99504 573 aa22.93■■□□□ 1.26
HOXA9-203ENST00000465941 C1orf115Q9H7X2 142 aa22.93■■□□□ 1.26
HOXA9-203ENST00000465941 COPRSQ9NQ92 184 aa22.93■■□□□ 1.26
HOXA9-203ENST00000465941 LTBP1Q14766 1721 aa22.93■■□□□ 1.26
HOXA9-203ENST00000465941 MROH5Q6ZUA9 1318 aa22.92■■□□□ 1.26
HOXA9-203ENST00000465941 PNMA6EA0A0J9YXQ4 647 aa22.92■■□□□ 1.26
HOXA9-203ENST00000465941 PPIP5K2O43314 1243 aa22.92■■□□□ 1.26
HOXA9-203ENST00000465941 AOC3Q16853 763 aa22.92■■□□□ 1.26
HOXA9-203ENST00000465941 LRRC24Q50LG9 513 aa22.92■■□□□ 1.26
HOXA9-203ENST00000465941 LARGE2Q8N3Y3 721 aa22.92■■□□□ 1.26
HOXA9-203ENST00000465941 EYA2O00167 538 aa22.91■■□□□ 1.26
HOXA9-203ENST00000465941 CIAO1O76071 339 aa22.91■■□□□ 1.26
HOXA9-203ENST00000465941 JDP2Q8WYK2 163 aa22.91■■□□□ 1.26
HOXA9-203ENST00000465941 SUPT16HQ9Y5B9 1047 aaKnown RBP22.91■■□□□ 1.26
HOXA9-203ENST00000465941 WTIPA6NIX2 430 aaPredicted RBP22.9■■□□□ 1.26
HOXA9-203ENST00000465941 POLA2Q14181 598 aa22.9■■□□□ 1.26
HOXA9-203ENST00000465941 HELBQ8NG08 1087 aaPredicted RBP22.9■■□□□ 1.26
HOXA9-203ENST00000465941 SSH3Q8TE77 659 aa22.9■■□□□ 1.26
HOXA9-203ENST00000465941 ZC3H12CQ9C0D7 883 aaKnown RBP22.9■■□□□ 1.26
HOXA9-203ENST00000465941 SPEF2Q9C093 1822 aa22.89■■□□□ 1.26
HOXA9-203ENST00000465941 ZNF804BA4D1E1 1349 aa22.89■■□□□ 1.26
HOXA9-203ENST00000465941 FZD9O00144 591 aa22.89■■□□□ 1.25
HOXA9-203ENST00000465941 TAF5LO75529 589 aa22.89■■□□□ 1.25
HOXA9-203ENST00000465941 CEP85Q6P2H3 762 aa22.89■■□□□ 1.25
HOXA9-203ENST00000465941 ATG9AQ7Z3C6 839 aa22.89■■□□□ 1.25
HOXA9-203ENST00000465941 RIMBP2O15034 1052 aa22.88■■□□□ 1.25
HOXA9-203ENST00000465941 NIM1KQ8IY84 436 aa22.88■■□□□ 1.25
HOXA9-203ENST00000465941 GPR101Q96P66 508 aaPredicted RBP22.88■■□□□ 1.25
HOXA9-203ENST00000465941 PA2G4Q9UQ80 394 aaKnown RBP22.88■■□□□ 1.25
HOXA9-203ENST00000465941 KCNJ4P48050 445 aa22.87■■□□□ 1.25
HOXA9-203ENST00000465941 METTL24Q5JXM2 366 aa22.87■■□□□ 1.25
HOXA9-203ENST00000465941 RPAP2Q8IXW5 612 aaPredicted RBP22.87■■□□□ 1.25
HOXA9-203ENST00000465941 VGLL2Q8N8G2 317 aa22.87■■□□□ 1.25
HOXA9-203ENST00000465941 SIL1Q9H173 461 aa22.87■■□□□ 1.25
HOXA9-203ENST00000465941 ZNRF3Q9ULT6 936 aa22.87■■□□□ 1.25
HOXA9-203ENST00000465941 COL4A5P29400 1685 aa22.87■■□□□ 1.25
HOXA9-203ENST00000465941 CCDC88AQ3V6T2 1871 aa22.86■■□□□ 1.25
HOXA9-203ENST00000465941 PDE8BO95263 885 aa22.86■■□□□ 1.25
HOXA9-203ENST00000465941 IL15P40933 162 aaPredicted RBP22.86■■□□□ 1.25
HOXA9-203ENST00000465941 UBE4AQ14139 1066 aa22.86■■□□□ 1.25
HOXA9-203ENST00000465941 C15orf52Q6ZUT6 534 aaKnown RBP22.86■■□□□ 1.25
HOXA9-203ENST00000465941 MED23Q9ULK4 1368 aa22.86■■□□□ 1.25
HOXA9-203ENST00000465941 DICER1Q9UPY3 1922 aaKnown RBP22.86■■□□□ 1.25
HOXA9-203ENST00000465941 GLTPD2A6NH11 291 aa22.85■■□□□ 1.25
HOXA9-203ENST00000465941 SNAP23O00161 211 aa22.85■■□□□ 1.25
HOXA9-203ENST00000465941 DPY19L2Q6NUT2 758 aa22.85■■□□□ 1.25
HOXA9-203ENST00000465941 CRBNQ96SW2 442 aa22.84■■□□□ 1.25
HOXA9-203ENST00000465941 IRS2Q9Y4H2 1338 aa22.83■■□□□ 1.25
HOXA9-203ENST00000465941 TXNRD3Q86VQ6 643 aa22.83■■□□□ 1.25
HOXA9-203ENST00000465941 CEP126Q9P2H0 1117 aa22.83■■□□□ 1.25
HOXA9-203ENST00000465941 NOP58Q9Y2X3 529 aaKnown RBP22.83■■□□□ 1.25
HOXA9-203ENST00000465941 EIF6P56537 245 aaKnown RBP22.82■■□□□ 1.24
HOXA9-203ENST00000465941 G3BP1Q13283 466 aaKnown RBP eCLIP22.82■■□□□ 1.24
HOXA9-203ENST00000465941 DOK7Q18PE1 504 aa22.82■■□□□ 1.24
HOXA9-203ENST00000465941 SIRT2Q8IXJ6 389 aa22.82■■□□□ 1.24
HOXA9-203ENST00000465941 DBNDD1Q9H9R9 158 aa22.82■■□□□ 1.24
HOXA9-203ENST00000465941 YDJCA8MPS7 323 aa22.81■■□□□ 1.24
HOXA9-203ENST00000465941 G3V3G9 751 aa22.81■■□□□ 1.24
HOXA9-203ENST00000465941 ECE2O60344 883 aa22.81■■□□□ 1.24
HOXA9-203ENST00000465941 FGFR2P21802 821 aa22.81■■□□□ 1.24
HOXA9-203ENST00000465941 KLRK1P26718 216 aa22.81■■□□□ 1.24
HOXA9-203ENST00000465941 PUM3Q15397 648 aaKnown RBP22.81■■□□□ 1.24
HOXA9-203ENST00000465941 DCAF8Q5TAQ9 597 aa22.81■■□□□ 1.24
HOXA9-203ENST00000465941 PODNQ7Z5L7 613 aa22.81■■□□□ 1.24
HOXA9-203ENST00000465941 ZNF784Q8NCA9 323 aaPredicted RBP22.81■■□□□ 1.24
HOXA9-203ENST00000465941 COA1Q9GZY4 146 aa22.81■■□□□ 1.24
HOXA9-203ENST00000465941 TIAM2Q8IVF5 1701 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms