RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 ANKRD18AQ8IVF6 992 aa17.96■□□□□ 0.47
CACNA1C-224ENST00000465934 ADARB2Q9NS39 739 aaKnown RBP17.96■□□□□ 0.47
CACNA1C-224ENST00000465934 PODXL2Q9NZ53 605 aa17.96■□□□□ 0.47
CACNA1C-224ENST00000465934 ANKIB1Q9P2G1 1089 aa17.96■□□□□ 0.47
CACNA1C-224ENST00000465934 WTIPA6NIX2 430 aaPredicted RBP17.95■□□□□ 0.46
CACNA1C-224ENST00000465934 TMEM88BA6NKF7 163 aa17.95■□□□□ 0.46
CACNA1C-224ENST00000465934 PSMD14O00487 310 aa17.95■□□□□ 0.46
CACNA1C-224ENST00000465934 ECE2O60344 883 aa17.95■□□□□ 0.46
CACNA1C-224ENST00000465934 CASP7P55210 303 aa17.95■□□□□ 0.46
CACNA1C-224ENST00000465934 LINS1Q8NG48 757 aa17.95■□□□□ 0.46
CACNA1C-224ENST00000465934 TRPM4Q8TD43 1214 aa17.95■□□□□ 0.46
CACNA1C-224ENST00000465934 BCL2L13Q9BXK5 485 aa17.95■□□□□ 0.46
CACNA1C-224ENST00000465934 RTL9Q8NET4 1388 aa17.94■□□□□ 0.46
CACNA1C-224ENST00000465934 TRAF5O00463 557 aa17.94■□□□□ 0.46
CACNA1C-224ENST00000465934 HIRAP54198 1017 aaPredicted RBP17.94■□□□□ 0.46
CACNA1C-224ENST00000465934 EYA3Q99504 573 aa17.94■□□□□ 0.46
CACNA1C-224ENST00000465934 GGA1Q9UJY5 639 aa17.94■□□□□ 0.46
CACNA1C-224ENST00000465934 MICALL2Q8IY33 904 aa17.93■□□□□ 0.46
CACNA1C-224ENST00000465934 CDC5LQ99459 802 aaKnown RBP17.93■□□□□ 0.46
CACNA1C-224ENST00000465934 ZC3H12CQ9C0D7 883 aaKnown RBP17.93■□□□□ 0.46
CACNA1C-224ENST00000465934 CNOT7Q9UIV1 285 aaKnown RBP17.93■□□□□ 0.46
CACNA1C-224ENST00000465934 CNTNAP1P78357 1384 aa17.92■□□□□ 0.46
CACNA1C-224ENST00000465934 FAM161AQ3B820 660 aa17.92■□□□□ 0.46
CACNA1C-224ENST00000465934 BEND3Q5T5X7 828 aa17.92■□□□□ 0.46
CACNA1C-224ENST00000465934 PLA2G12BQ9BX93 195 aa17.92■□□□□ 0.46
CACNA1C-224ENST00000465934 XDHP47989 1333 aa17.92■□□□□ 0.46
CACNA1C-224ENST00000465934 EGFRP00533 1210 aa17.91■□□□□ 0.46
CACNA1C-224ENST00000465934 BSDC1Q9NW68 430 aaPredicted RBP17.91■□□□□ 0.46
CACNA1C-224ENST00000465934 MINPP1Q9UNW1 487 aa17.91■□□□□ 0.46
CACNA1C-224ENST00000465934 HSPA1AP0DMV8 641 aaKnown RBP17.9■□□□□ 0.46
CACNA1C-224ENST00000465934 HSPA1BP0DMV9 641 aaKnown RBP17.9■□□□□ 0.46
CACNA1C-224ENST00000465934 ITGA6P23229 1130 aa17.9■□□□□ 0.46
CACNA1C-224ENST00000465934 SAMD7Q7Z3H4 446 aa17.9■□□□□ 0.46
CACNA1C-224ENST00000465934 CSF1RP07333 972 aa17.89■□□□□ 0.45
CACNA1C-224ENST00000465934 VEGFBP49765 207 aa17.89■□□□□ 0.45
CACNA1C-224ENST00000465934 CST9Q5W186 159 aa17.89■□□□□ 0.45
CACNA1C-224ENST00000465934 GLIS2Q9BZE0 524 aaPredicted RBP17.89■□□□□ 0.45
CACNA1C-224ENST00000465934 H7C1D1 291 aa17.88■□□□□ 0.45
CACNA1C-224ENST00000465934 ATP2B4P23634 1241 aa17.88■□□□□ 0.45
CACNA1C-224ENST00000465934 TBC1D10BQ4KMP7 808 aaPredicted RBP17.88■□□□□ 0.45
CACNA1C-224ENST00000465934 DPF2Q92785 391 aa17.88■□□□□ 0.45
CACNA1C-224ENST00000465934 PGAP2Q9UHJ9 254 aa17.88■□□□□ 0.45
CACNA1C-224ENST00000465934 ABT1Q9ULW3 272 aaKnown RBP17.88■□□□□ 0.45
CACNA1C-224ENST00000465934 RASSF10A6NK89 507 aa17.87■□□□□ 0.45
CACNA1C-224ENST00000465934 G3V3G9 751 aa17.87■□□□□ 0.45
CACNA1C-224ENST00000465934 VIL1P09327 827 aaKnown RBP17.87■□□□□ 0.45
CACNA1C-224ENST00000465934 IGHMBP2P38935 993 aaKnown RBP17.87■□□□□ 0.45
CACNA1C-224ENST00000465934 FOXO4P98177 505 aa17.87■□□□□ 0.45
CACNA1C-224ENST00000465934 EPHA10Q5JZY3 1008 aa17.87■□□□□ 0.45
CACNA1C-224ENST00000465934 DCAF8Q5TAQ9 597 aa17.87■□□□□ 0.45
CACNA1C-224ENST00000465934 SLC4A10Q6U841 1118 aa17.87■□□□□ 0.45
CACNA1C-224ENST00000465934 DLK2Q6UY11 383 aa17.87■□□□□ 0.45
CACNA1C-224ENST00000465934 RPS12P25398 132 aaKnown RBP17.86■□□□□ 0.45
CACNA1C-224ENST00000465934 KLRK1P26718 216 aa17.86■□□□□ 0.45
CACNA1C-224ENST00000465934 CCT4P50991 539 aaKnown RBP17.86■□□□□ 0.45
CACNA1C-224ENST00000465934 RBM26Q5T8P6 1007 aaKnown RBP17.86■□□□□ 0.45
CACNA1C-224ENST00000465934 COL13A1Q5TAT6 717 aaPredicted RBP17.86■□□□□ 0.45
CACNA1C-224ENST00000465934 CDCA7LQ96GN5 454 aa17.86■□□□□ 0.45
CACNA1C-224ENST00000465934 E9PSI1 815 aa17.85■□□□□ 0.45
CACNA1C-224ENST00000465934 GRM8O00222 908 aa17.85■□□□□ 0.45
CACNA1C-224ENST00000465934 SLFN5Q08AF3 891 aa17.85■□□□□ 0.45
CACNA1C-224ENST00000465934 SCN9AQ15858 1988 aa17.85■□□□□ 0.45
CACNA1C-224ENST00000465934 IFFO2Q5TF58 517 aa17.85■□□□□ 0.45
CACNA1C-224ENST00000465934 TXNRD3Q86VQ6 643 aa17.85■□□□□ 0.45
CACNA1C-224ENST00000465934 MRPL50Q8N5N7 158 aaKnown RBP17.85■□□□□ 0.45
CACNA1C-224ENST00000465934 ZC3H15Q8WU90 426 aaKnown RBP17.85■□□□□ 0.45
CACNA1C-224ENST00000465934 MED23Q9ULK4 1368 aa17.85■□□□□ 0.45
CACNA1C-224ENST00000465934 ASTN2O75129 1339 aaPredicted RBP17.84■□□□□ 0.45
CACNA1C-224ENST00000465934 CELF2O95319 508 aaKnown RBP17.84■□□□□ 0.45
CACNA1C-224ENST00000465934 DEFB115Q30KQ5 88 aa17.84■□□□□ 0.45
CACNA1C-224ENST00000465934 RSBN1LQ6PCB5 846 aaPredicted RBP17.84■□□□□ 0.45
CACNA1C-224ENST00000465934 MPHOSPH8Q99549 860 aa17.84■□□□□ 0.45
CACNA1C-224ENST00000465934 CHMP3Q9Y3E7 222 aa17.84■□□□□ 0.45
CACNA1C-224ENST00000465934 ANKRD18BA2A2Z9 1011 aa17.83■□□□□ 0.44
CACNA1C-224ENST00000465934 SNAP23O00161 211 aa17.83■□□□□ 0.44
CACNA1C-224ENST00000465934 LMBR1LQ6UX01 489 aa17.83■□□□□ 0.44
CACNA1C-224ENST00000465934 USP48Q86UV5 1035 aa17.83■□□□□ 0.44
CACNA1C-224ENST00000465934 SSH1Q8WYL5 1049 aa17.83■□□□□ 0.44
CACNA1C-224ENST00000465934 MXD3Q9BW11 206 aa17.83■□□□□ 0.44
CACNA1C-224ENST00000465934 SRCIN1Q9C0H9 1055 aa17.83■□□□□ 0.44
CACNA1C-224ENST00000465934 ZNF408Q9H9D4 720 aa17.83■□□□□ 0.44
CACNA1C-224ENST00000465934 SPEF2Q9C093 1822 aa17.83■□□□□ 0.44
CACNA1C-224ENST00000465934 MYH3P11055 1940 aa17.82■□□□□ 0.44
CACNA1C-224ENST00000465934 ZNF804BA4D1E1 1349 aa17.82■□□□□ 0.44
CACNA1C-224ENST00000465934 CHRNDQ07001 517 aa17.82■□□□□ 0.44
CACNA1C-224ENST00000465934 IFIT5Q13325 482 aaKnown RBP17.82■□□□□ 0.44
CACNA1C-224ENST00000465934 KIF4BQ2VIQ3 1234 aa17.82■□□□□ 0.44
CACNA1C-224ENST00000465934 CDC37L1Q7L3B6 337 aa17.82■□□□□ 0.44
CACNA1C-224ENST00000465934 PODNQ7Z5L7 613 aa17.82■□□□□ 0.44
CACNA1C-224ENST00000465934 GMLQ99445 158 aa17.82■□□□□ 0.44
CACNA1C-224ENST00000465934 C9orf78Q9NZ63 289 aaPredicted RBP17.82■□□□□ 0.44
CACNA1C-224ENST00000465934 LEMD3Q9Y2U8 911 aa17.82■□□□□ 0.44
CACNA1C-224ENST00000465934 WDR33Q9C0J8 1336 aaKnown RBP17.81■□□□□ 0.44
CACNA1C-224ENST00000465934 USP17L3A6NCW0 530 aa17.81■□□□□ 0.44
CACNA1C-224ENST00000465934 USP17L4A6NCW7 530 aa17.81■□□□□ 0.44
CACNA1C-224ENST00000465934 ADM5C9JUS6 153 aa17.81■□□□□ 0.44
CACNA1C-224ENST00000465934 ALDH1L1O75891 902 aa17.81■□□□□ 0.44
CACNA1C-224ENST00000465934 ZNF280AP59817 542 aaPredicted RBP17.81■□□□□ 0.44
CACNA1C-224ENST00000465934 GRM1Q13255 1194 aa17.81■□□□□ 0.44
CACNA1C-224ENST00000465934 CYP4F22Q6NT55 531 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms