RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 CHMP3Q9Y3E7 222 aa32.65■■■□□ 2.82
SMC4-206ENST00000465903 IFIT5Q13325 482 aaKnown RBP32.64■■■□□ 2.82
SMC4-206ENST00000465903 ANKRD44Q8N8A2 993 aa32.64■■■□□ 2.82
SMC4-206ENST00000465903 GPR101Q96P66 508 aaPredicted RBP32.64■■■□□ 2.82
SMC4-206ENST00000465903 BICC1Q9H694 974 aaKnown RBP32.64■■■□□ 2.82
SMC4-206ENST00000465903 WASHC4Q2M389 1173 aa32.63■■■□□ 2.81
SMC4-206ENST00000465903 RABL6Q3YEC7 729 aaPredicted RBP32.63■■■□□ 2.81
SMC4-206ENST00000465903 NIM1KQ8IY84 436 aa32.63■■■□□ 2.81
SMC4-206ENST00000465903 ANKIB1Q9P2G1 1089 aa32.63■■■□□ 2.81
SMC4-206ENST00000465903 XDHP47989 1333 aa32.62■■■□□ 2.81
SMC4-206ENST00000465903 A0A1B0GUL6 1792 aa32.62■■■□□ 2.81
SMC4-206ENST00000465903 RIMBP2O15034 1052 aa32.61■■■□□ 2.81
SMC4-206ENST00000465903 UFL1O94874 794 aa32.61■■■□□ 2.81
SMC4-206ENST00000465903 ZKSCAN2Q63HK3 967 aa32.61■■■□□ 2.81
SMC4-206ENST00000465903 MPHOSPH8Q99549 860 aa32.61■■■□□ 2.81
SMC4-206ENST00000465903 GGA1Q9UJY5 639 aa32.61■■■□□ 2.81
SMC4-206ENST00000465903 WTIPA6NIX2 430 aaPredicted RBP32.6■■■□□ 2.81
SMC4-206ENST00000465903 EIF6P56537 245 aaKnown RBP32.6■■■□□ 2.81
SMC4-206ENST00000465903 ZNF594Q96JF6 807 aaPredicted RBP32.6■■■□□ 2.81
SMC4-206ENST00000465903 ZNRF3Q9ULT6 936 aa32.6■■■□□ 2.81
SMC4-206ENST00000465903 SCN4AP35499 1836 aa32.6■■■□□ 2.81
SMC4-206ENST00000465903 VEGFAP15692 232 aaPredicted RBP32.59■■■□□ 2.81
SMC4-206ENST00000465903 ATP2B4P23634 1241 aa32.59■■■□□ 2.81
SMC4-206ENST00000465903 CCDC57Q2TAC2 916 aa32.59■■■□□ 2.81
SMC4-206ENST00000465903 EYA3Q99504 573 aa32.59■■■□□ 2.81
SMC4-206ENST00000465903 CLUAP1Q96AJ1 413 aa32.58■■■□□ 2.81
SMC4-206ENST00000465903 L3MBTL3Q96JM7 780 aaPredicted RBP32.58■■■□□ 2.81
SMC4-206ENST00000465903 YDJCA8MPS7 323 aa32.57■■■□□ 2.8
SMC4-206ENST00000465903 C1QTNF8P60827 252 aa32.57■■■□□ 2.8
SMC4-206ENST00000465903 GPC2Q8N158 579 aa32.57■■■□□ 2.8
SMC4-206ENST00000465903 CXCL9Q07325 125 aa32.56■■■□□ 2.8
SMC4-206ENST00000465903 MEIS3Q99687 375 aa32.56■■■□□ 2.8
SMC4-206ENST00000465903 UBTFL1P0CB47 393 aaPredicted RBP32.55■■■□□ 2.8
SMC4-206ENST00000465903 CHRNDQ07001 517 aa32.55■■■□□ 2.8
SMC4-206ENST00000465903 ZC3H12CQ9C0D7 883 aaKnown RBP32.55■■■□□ 2.8
SMC4-206ENST00000465903 DBNDD1Q9H9R9 158 aa32.55■■■□□ 2.8
SMC4-206ENST00000465903 SCN9AQ15858 1988 aa32.55■■■□□ 2.8
SMC4-206ENST00000465903 ANKRD2Q9GZV1 360 aa32.54■■■□□ 2.8
SMC4-206ENST00000465903 GJA3Q9Y6H8 435 aa32.54■■■□□ 2.8
SMC4-206ENST00000465903 TOMM70O94826 608 aa32.53■■■□□ 2.8
SMC4-206ENST00000465903 DOK7Q18PE1 504 aa32.53■■■□□ 2.8
SMC4-206ENST00000465903 TAF7LQ5H9L4 462 aa32.52■■■□□ 2.8
SMC4-206ENST00000465903 LDHAL6AQ6ZMR3 332 aa32.52■■■□□ 2.8
SMC4-206ENST00000465903 TMEM57Q8N5G2 664 aa32.52■■■□□ 2.8
SMC4-206ENST00000465903 LEMD3Q9Y2U8 911 aa32.52■■■□□ 2.8
SMC4-206ENST00000465903 PUS3Q9BZE2 481 aaKnown RBP32.51■■■□□ 2.79
SMC4-206ENST00000465903 ECE2O60344 883 aa32.5■■■□□ 2.79
SMC4-206ENST00000465903 RAD17O75943 681 aa32.5■■■□□ 2.79
SMC4-206ENST00000465903 CIAPIN1Q6FI81 312 aa32.5■■■□□ 2.79
SMC4-206ENST00000465903 HELBQ8NG08 1087 aaPredicted RBP32.5■■■□□ 2.79
SMC4-206ENST00000465903 LRRFIP2Q9Y608 721 aaKnown RBP32.5■■■□□ 2.79
SMC4-206ENST00000465903 TAF5LO75529 589 aa32.49■■■□□ 2.79
SMC4-206ENST00000465903 RFX5P48382 616 aaPredicted RBP32.49■■■□□ 2.79
SMC4-206ENST00000465903 C16orf71Q8IYS4 520 aaPredicted RBP32.49■■■□□ 2.79
SMC4-206ENST00000465903 KCNQ5Q9NR82 932 aa32.49■■■□□ 2.79
SMC4-206ENST00000465903 CNNM1Q9NRU3 951 aa32.49■■■□□ 2.79
SMC4-206ENST00000465903 PSME4Q14997 1843 aa32.49■■■□□ 2.79
SMC4-206ENST00000465903 ZNF804BA4D1E1 1349 aa32.49■■■□□ 2.79
SMC4-206ENST00000465903 MED23Q9ULK4 1368 aa32.48■■■□□ 2.79
SMC4-206ENST00000465903 RLBP1P12271 317 aa32.48■■■□□ 2.79
SMC4-206ENST00000465903 TXNRD3Q86VQ6 643 aa32.48■■■□□ 2.79
SMC4-206ENST00000465903 DZIP1LQ8IYY4 767 aaKnown RBP32.48■■■□□ 2.79
SMC4-206ENST00000465903 RBM46Q8TBY0 533 aaKnown RBP32.48■■■□□ 2.79
SMC4-206ENST00000465903 RIPOR2Q9Y4F9 1068 aa32.48■■■□□ 2.79
SMC4-206ENST00000465903 IQCA1LA6NCM1 817 aa32.47■■■□□ 2.79
SMC4-206ENST00000465903 SNAP23O00161 211 aa32.47■■■□□ 2.79
SMC4-206ENST00000465903 SCNN1DP51172 638 aa32.47■■■□□ 2.79
SMC4-206ENST00000465903 KLHDC4Q8TBB5 520 aa32.47■■■□□ 2.79
SMC4-206ENST00000465903 TAF1DQ9H5J8 278 aaPredicted RBP32.47■■■□□ 2.79
SMC4-206ENST00000465903 RCAN3Q9UKA8 241 aa32.47■■■□□ 2.79
SMC4-206ENST00000465903 GNAI3P08754 354 aa32.46■■■□□ 2.79
SMC4-206ENST00000465903 HACL1Q9UJ83 578 aa32.46■■■□□ 2.79
SMC4-206ENST00000465903 HDAC5Q9UQL6 1122 aa32.46■■■□□ 2.79
SMC4-206ENST00000465903 KLRK1P26718 216 aa32.45■■■□□ 2.79
SMC4-206ENST00000465903 LRRC24Q50LG9 513 aa32.45■■■□□ 2.79
SMC4-206ENST00000465903 IRS2Q9Y4H2 1338 aa32.45■■■□□ 2.78
SMC4-206ENST00000465903 TNIP1Q15025 636 aa32.44■■■□□ 2.78
SMC4-206ENST00000465903 PSMD14O00487 310 aa32.43■■■□□ 2.78
SMC4-206ENST00000465903 PTPN12Q05209 780 aaKnown RBP32.43■■■□□ 2.78
SMC4-206ENST00000465903 YTHDC1Q96MU7 727 aaKnown RBP32.43■■■□□ 2.78
SMC4-206ENST00000465903 G3V3G9 751 aa32.42■■■□□ 2.78
SMC4-206ENST00000465903 PLIN1O60240 522 aa32.42■■■□□ 2.78
SMC4-206ENST00000465903 POTEIP0CG38 1075 aa32.42■■■□□ 2.78
SMC4-206ENST00000465903 POTEJP0CG39 1038 aa32.42■■■□□ 2.78
SMC4-206ENST00000465903 EPS15P42566 896 aa32.42■■■□□ 2.78
SMC4-206ENST00000465903 DCAF8Q5TAQ9 597 aa32.42■■■□□ 2.78
SMC4-206ENST00000465903 FTSJ3Q8IY81 847 aaKnown RBP32.42■■■□□ 2.78
SMC4-206ENST00000465903 ZNF646O15015 1829 aaPredicted RBP32.42■■■□□ 2.78
SMC4-206ENST00000465903 EPHX2P34913 555 aa32.41■■■□□ 2.78
SMC4-206ENST00000465903 KCNJ4P48050 445 aa32.41■■■□□ 2.78
SMC4-206ENST00000465903 GMPSP49915 693 aaPredicted RBP32.41■■■□□ 2.78
SMC4-206ENST00000465903 C15orf52Q6ZUT6 534 aaKnown RBP32.4■■■□□ 2.78
SMC4-206ENST00000465903 PODNQ7Z5L7 613 aa32.4■■■□□ 2.78
SMC4-206ENST00000465903 ADAMTSL1Q8N6G6 1762 aa32.4■■■□□ 2.78
SMC4-206ENST00000465903 PANK1Q8TE04 598 aa32.39■■■□□ 2.78
SMC4-206ENST00000465903 GPRC5DQ9NZD1 345 aa32.39■■■□□ 2.78
SMC4-206ENST00000465903 ZBTB12Q9Y330 459 aaPredicted RBP32.39■■■□□ 2.78
SMC4-206ENST00000465903 MROH5Q6ZUA9 1318 aa32.39■■■□□ 2.78
SMC4-206ENST00000465903 VIL1P09327 827 aaKnown RBP32.38■■■□□ 2.77
SMC4-206ENST00000465903 LMOD1P29536 600 aaPredicted RBP32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms