RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 SEC31BQ9NQW1 1179 aa13.47□□□□□ -0.25
GPNMB-206ENST00000465673 IRS4O14654 1257 aaPredicted RBP13.46□□□□□ -0.25
GPNMB-206ENST00000465673 RPS8P62241 208 aaKnown RBP13.46□□□□□ -0.25
GPNMB-206ENST00000465673 C2orf69Q8N8R5 385 aa13.46□□□□□ -0.25
GPNMB-206ENST00000465673 DCPSQ96C86 337 aaKnown RBP13.46□□□□□ -0.25
GPNMB-206ENST00000465673 SCAF8Q9UPN6 1271 aaKnown RBP13.46□□□□□ -0.25
GPNMB-206ENST00000465673 TRPA1O75762 1119 aa13.45□□□□□ -0.26
GPNMB-206ENST00000465673 ZNF157P51786 506 aaPredicted RBP13.45□□□□□ -0.26
GPNMB-206ENST00000465673 KIF4BQ2VIQ3 1234 aa13.45□□□□□ -0.26
GPNMB-206ENST00000465673 CCDC85AQ96PX6 553 aaPredicted RBP13.45□□□□□ -0.26
GPNMB-206ENST00000465673 RNF186Q9NXI6 227 aa13.45□□□□□ -0.26
GPNMB-206ENST00000465673 GGA3Q9NZ52 723 aa13.45□□□□□ -0.26
GPNMB-206ENST00000465673 SCN9AQ15858 1988 aa13.44□□□□□ -0.26
GPNMB-206ENST00000465673 WTIPA6NIX2 430 aaPredicted RBP13.44□□□□□ -0.26
GPNMB-206ENST00000465673 VIL1P09327 827 aaKnown RBP13.44□□□□□ -0.26
GPNMB-206ENST00000465673 RPS12P25398 132 aaKnown RBP13.44□□□□□ -0.26
GPNMB-206ENST00000465673 SOX10P56693 466 aa13.44□□□□□ -0.26
GPNMB-206ENST00000465673 DUSP27Q5VZP5 1158 aa13.44□□□□□ -0.26
GPNMB-206ENST00000465673 ZC3H12CQ9C0D7 883 aaKnown RBP13.44□□□□□ -0.26
GPNMB-206ENST00000465673 DBF4Q9UBU7 674 aaPredicted RBP13.44□□□□□ -0.26
GPNMB-206ENST00000465673 UFL1O94874 794 aa13.43□□□□□ -0.26
GPNMB-206ENST00000465673 CCDC102AQ96A19 550 aa13.43□□□□□ -0.26
GPNMB-206ENST00000465673 CDCA5Q96FF9 252 aa13.43□□□□□ -0.26
GPNMB-206ENST00000465673 CSRNP1Q96S65 589 aa13.43□□□□□ -0.26
GPNMB-206ENST00000465673 EYA3Q99504 573 aa13.43□□□□□ -0.26
GPNMB-206ENST00000465673 PHAXQ9H814 394 aaKnown RBP13.43□□□□□ -0.26
GPNMB-206ENST00000465673 ELL2O00472 640 aaPredicted RBP13.42□□□□□ -0.26
GPNMB-206ENST00000465673 SCARF1Q14162 830 aa13.42□□□□□ -0.26
GPNMB-206ENST00000465673 RALBP1Q15311 655 aa13.42□□□□□ -0.26
GPNMB-206ENST00000465673 ANGEL2Q5VTE6 544 aaKnown RBP13.42□□□□□ -0.26
GPNMB-206ENST00000465673 MOB2Q70IA6 237 aa13.42□□□□□ -0.26
GPNMB-206ENST00000465673 RIC3Q7Z5B4 369 aa13.42□□□□□ -0.26
GPNMB-206ENST00000465673 SULF1Q8IWU6 871 aa13.42□□□□□ -0.26
GPNMB-206ENST00000465673 RUNDC1Q96C34 613 aa13.42□□□□□ -0.26
GPNMB-206ENST00000465673 MBIPQ9NS73 344 aa13.42□□□□□ -0.26
GPNMB-206ENST00000465673 HYPKQ9NX55 129 aa13.42□□□□□ -0.26
GPNMB-206ENST00000465673 ANKIB1Q9P2G1 1089 aa13.42□□□□□ -0.26
GPNMB-206ENST00000465673 ADAMTS8Q9UP79 889 aa13.42□□□□□ -0.26
GPNMB-206ENST00000465673 G3V3G9 751 aa13.41□□□□□ -0.26
GPNMB-206ENST00000465673 SLC10A3P09131 477 aa13.41□□□□□ -0.26
GPNMB-206ENST00000465673 TRIM28Q13263 835 aaKnown RBP13.41□□□□□ -0.26
GPNMB-206ENST00000465673 DCAF8Q5TAQ9 597 aa13.41□□□□□ -0.26
GPNMB-206ENST00000465673 PRAMEF18Q5VWM3 479 aa13.41□□□□□ -0.26
GPNMB-206ENST00000465673 ZBTB38Q8NAP3 1195 aaPredicted RBP13.41□□□□□ -0.26
GPNMB-206ENST00000465673 MYD88Q99836 296 aa13.41□□□□□ -0.26
GPNMB-206ENST00000465673 PODXL2Q9NZ53 605 aa13.41□□□□□ -0.26
GPNMB-206ENST00000465673 HOXB7P09629 217 aa13.4□□□□□ -0.26
GPNMB-206ENST00000465673 ZNF280AP59817 542 aaPredicted RBP13.4□□□□□ -0.26
GPNMB-206ENST00000465673 DDX10Q13206 875 aaKnown RBP13.4□□□□□ -0.26
GPNMB-206ENST00000465673 RSBN1LQ6PCB5 846 aaPredicted RBP13.4□□□□□ -0.26
GPNMB-206ENST00000465673 RASAL3Q86YV0 1011 aa13.4□□□□□ -0.26
GPNMB-206ENST00000465673 MXD3Q9BW11 206 aa13.4□□□□□ -0.26
GPNMB-206ENST00000465673 SAGE1Q9NXZ1 904 aa13.4□□□□□ -0.26
GPNMB-206ENST00000465673 GGA1Q9UJY5 639 aa13.4□□□□□ -0.26
GPNMB-206ENST00000465673 TNRC18O15417 2968 aaPredicted RBP13.39□□□□□ -0.27
GPNMB-206ENST00000465673 GMLQ99445 158 aa13.39□□□□□ -0.27
GPNMB-206ENST00000465673 MYBBP1AQ9BQG0 1328 aaKnown RBP13.39□□□□□ -0.27
GPNMB-206ENST00000465673 UBE2Q2LH0YL09 131 aa13.38□□□□□ -0.27
GPNMB-206ENST00000465673 GOLGA2Q08379 1002 aa13.38□□□□□ -0.27
GPNMB-206ENST00000465673 WDR43Q15061 677 aaKnown RBP eCLIP13.38□□□□□ -0.27
GPNMB-206ENST00000465673 PDE4DIPQ5VU43 2346 aa13.38□□□□□ -0.27
GPNMB-206ENST00000465673 PDE8AO60658 829 aa13.37□□□□□ -0.27
GPNMB-206ENST00000465673 USP17L8P0C7I0 530 aa13.37□□□□□ -0.27
GPNMB-206ENST00000465673 ZNF853P0CG23 659 aa13.37□□□□□ -0.27
GPNMB-206ENST00000465673 NBPF9Q3BBW0 867 aa13.37□□□□□ -0.27
GPNMB-206ENST00000465673 CCDC152Q4G0S7 254 aa13.37□□□□□ -0.27
GPNMB-206ENST00000465673 C8orf58Q8NAV2 365 aa13.37□□□□□ -0.27
GPNMB-206ENST00000465673 AGBL3Q8NEM8 1001 aa13.37□□□□□ -0.27
GPNMB-206ENST00000465673 MYOZ2Q9NPC6 264 aa13.37□□□□□ -0.27
GPNMB-206ENST00000465673 PCDH10Q9P2E7 1040 aa13.37□□□□□ -0.27
GPNMB-206ENST00000465673 TBC1D8O95759 1140 aa13.36□□□□□ -0.27
GPNMB-206ENST00000465673 PCCAP05165 728 aaPredicted RBP13.36□□□□□ -0.27
GPNMB-206ENST00000465673 MKRN3Q13064 507 aaKnown RBP13.36□□□□□ -0.27
GPNMB-206ENST00000465673 CTU1Q7Z7A3 348 aaKnown RBP13.36□□□□□ -0.27
GPNMB-206ENST00000465673 CCDC191Q8NCU4 936 aa13.36□□□□□ -0.27
GPNMB-206ENST00000465673 CWC25Q9NXE8 425 aaPredicted RBP13.36□□□□□ -0.27
GPNMB-206ENST00000465673 AKAP11Q9UKA4 1901 aa13.35□□□□□ -0.27
GPNMB-206ENST00000465673 USP17L3A6NCW0 530 aa13.35□□□□□ -0.27
GPNMB-206ENST00000465673 USP17L4A6NCW7 530 aa13.35□□□□□ -0.27
GPNMB-206ENST00000465673 APAF1O14727 1248 aa13.35□□□□□ -0.27
GPNMB-206ENST00000465673 USP17L1Q7RTZ2 530 aa13.35□□□□□ -0.27
GPNMB-206ENST00000465673 ANKRD18AQ8IVF6 992 aa13.35□□□□□ -0.27
GPNMB-206ENST00000465673 METTL22Q9BUU2 404 aaPredicted RBP13.35□□□□□ -0.27
GPNMB-206ENST00000465673 XDHP47989 1333 aa13.35□□□□□ -0.27
GPNMB-206ENST00000465673 ATP2B4P23634 1241 aa13.34□□□□□ -0.27
GPNMB-206ENST00000465673 TXNRD3Q86VQ6 643 aa13.34□□□□□ -0.27
GPNMB-206ENST00000465673 ZNF296Q8WUU4 475 aaPredicted RBP13.34□□□□□ -0.27
GPNMB-206ENST00000465673 FBXW7Q969H0 707 aa13.34□□□□□ -0.27
GPNMB-206ENST00000465673 HPS5Q9UPZ3 1129 aa13.34□□□□□ -0.27
GPNMB-206ENST00000465673 MAP3K2Q9Y2U5 619 aa13.34□□□□□ -0.27
GPNMB-206ENST00000465673 IGKV5-2P06315 115 aa13.33□□□□□ -0.28
GPNMB-206ENST00000465673 CTSWP56202 376 aa13.33□□□□□ -0.28
GPNMB-206ENST00000465673 PRKG1Q13976 671 aa13.33□□□□□ -0.28
GPNMB-206ENST00000465673 TTLL12Q14166 644 aaPredicted RBP13.33□□□□□ -0.28
GPNMB-206ENST00000465673 DACT2Q5SW24 774 aa13.33□□□□□ -0.28
GPNMB-206ENST00000465673 PODNQ7Z5L7 613 aa13.33□□□□□ -0.28
GPNMB-206ENST00000465673 TSPYL6Q8N831 410 aa13.33□□□□□ -0.28
GPNMB-206ENST00000465673 R3HDMLQ9H3Y0 253 aa13.33□□□□□ -0.28
GPNMB-206ENST00000465673 GREM2Q9H772 168 aa13.33□□□□□ -0.28
GPNMB-206ENST00000465673 MINPP1Q9UNW1 487 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms