RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 KCNJ4P48050 445 aa23.06■■□□□ 1.28
SCAMP3-204ENST00000465312 SIL1Q9H173 461 aa23.06■■□□□ 1.28
SCAMP3-204ENST00000465312 UFL1O94874 794 aa23.05■■□□□ 1.28
SCAMP3-204ENST00000465312 LMNB1P20700 586 aa23.05■■□□□ 1.28
SCAMP3-204ENST00000465312 C9orf131Q5VYM1 1079 aa23.05■■□□□ 1.28
SCAMP3-204ENST00000465312 GGA1Q9UJY5 639 aa23.05■■□□□ 1.28
SCAMP3-204ENST00000465312 MINPP1Q9UNW1 487 aa23.05■■□□□ 1.28
SCAMP3-204ENST00000465312 XDHP47989 1333 aa23.05■■□□□ 1.28
SCAMP3-204ENST00000465312 CHD4Q14839 1912 aa23.04■■□□□ 1.28
SCAMP3-204ENST00000465312 CENPBP07199 599 aaPredicted RBP23.04■■□□□ 1.28
SCAMP3-204ENST00000465312 CRBNQ96SW2 442 aa23.04■■□□□ 1.28
SCAMP3-204ENST00000465312 PSMD1Q99460 953 aa23.04■■□□□ 1.28
SCAMP3-204ENST00000465312 ANKRD2Q9GZV1 360 aa23.04■■□□□ 1.28
SCAMP3-204ENST00000465312 LTBP3Q9NS15 1303 aa23.04■■□□□ 1.28
SCAMP3-204ENST00000465312 UTRNP46939 3433 aa23.04■■□□□ 1.28
SCAMP3-204ENST00000465312 CCDC88AQ3V6T2 1871 aa23.03■■□□□ 1.28
SCAMP3-204ENST00000465312 PPIP5K2O43314 1243 aa23.03■■□□□ 1.28
SCAMP3-204ENST00000465312 IARSP41252 1262 aaKnown RBP23.03■■□□□ 1.28
SCAMP3-204ENST00000465312 CHRNDQ07001 517 aa23.03■■□□□ 1.28
SCAMP3-204ENST00000465312 HELBQ8NG08 1087 aaPredicted RBP23.03■■□□□ 1.28
SCAMP3-204ENST00000465312 PUS3Q9BZE2 481 aaKnown RBP23.03■■□□□ 1.28
SCAMP3-204ENST00000465312 G3V3G9 751 aa23.02■■□□□ 1.28
SCAMP3-204ENST00000465312 RIMBP2O15034 1052 aa23.02■■□□□ 1.28
SCAMP3-204ENST00000465312 METTL24Q5JXM2 366 aa23.02■■□□□ 1.28
SCAMP3-204ENST00000465312 DCAF8Q5TAQ9 597 aa23.02■■□□□ 1.28
SCAMP3-204ENST00000465312 LARGE2Q8N3Y3 721 aa23.02■■□□□ 1.28
SCAMP3-204ENST00000465312 EYA3Q99504 573 aa23.02■■□□□ 1.28
SCAMP3-204ENST00000465312 PA2G4Q9UQ80 394 aaKnown RBP23.02■■□□□ 1.28
SCAMP3-204ENST00000465312 PNMA6EA0A0J9YXQ4 647 aa23.01■■□□□ 1.27
SCAMP3-204ENST00000465312 ATP2B4P23634 1241 aa23.01■■□□□ 1.27
SCAMP3-204ENST00000465312 AOC3Q16853 763 aa23.01■■□□□ 1.27
SCAMP3-204ENST00000465312 LRRC24Q50LG9 513 aa23.01■■□□□ 1.27
SCAMP3-204ENST00000465312 GPR101Q96P66 508 aaPredicted RBP23.01■■□□□ 1.27
SCAMP3-204ENST00000465312 TAF5LO75529 589 aa23■■□□□ 1.27
SCAMP3-204ENST00000465312 RFX5P48382 616 aaPredicted RBP23■■□□□ 1.27
SCAMP3-204ENST00000465312 ATP8B2P98198 1209 aa23■■□□□ 1.27
SCAMP3-204ENST00000465312 PTPN12Q05209 780 aaKnown RBP23■■□□□ 1.27
SCAMP3-204ENST00000465312 OS9Q13438 667 aaPredicted RBP23■■□□□ 1.27
SCAMP3-204ENST00000465312 MTX1Q13505 466 aa23■■□□□ 1.27
SCAMP3-204ENST00000465312 WASHC4Q2M389 1173 aa23■■□□□ 1.27
SCAMP3-204ENST00000465312 TBC1D16Q8TBP0 767 aa23■■□□□ 1.27
SCAMP3-204ENST00000465312 JDP2Q8WYK2 163 aa23■■□□□ 1.27
SCAMP3-204ENST00000465312 ZBTB40Q9NUA8 1239 aa23■■□□□ 1.27
SCAMP3-204ENST00000465312 SBF1O95248 1867 aa23■■□□□ 1.27
SCAMP3-204ENST00000465312 SNED1Q8TER0 1413 aa22.99■■□□□ 1.27
SCAMP3-204ENST00000465312 EYA2O00167 538 aa22.99■■□□□ 1.27
SCAMP3-204ENST00000465312 IRX6P78412 446 aaPredicted RBP22.99■■□□□ 1.27
SCAMP3-204ENST00000465312 CEP85Q6P2H3 762 aa22.99■■□□□ 1.27
SCAMP3-204ENST00000465312 PODXL2Q9NZ53 605 aa22.99■■□□□ 1.27
SCAMP3-204ENST00000465312 POLLQ9UGP5 575 aa22.99■■□□□ 1.27
SCAMP3-204ENST00000465312 MROH5Q6ZUA9 1318 aa22.99■■□□□ 1.27
SCAMP3-204ENST00000465312 YY1P25490 414 aa22.98■■□□□ 1.27
SCAMP3-204ENST00000465312 PRELPP51888 382 aa22.98■■□□□ 1.27
SCAMP3-204ENST00000465312 NIM1KQ8IY84 436 aa22.98■■□□□ 1.27
SCAMP3-204ENST00000465312 RTFDC1Q9BY42 306 aaPredicted RBP22.98■■□□□ 1.27
SCAMP3-204ENST00000465312 ZC3H12CQ9C0D7 883 aaKnown RBP22.98■■□□□ 1.27
SCAMP3-204ENST00000465312 TIAM2Q8IVF5 1701 aa22.98■■□□□ 1.27
SCAMP3-204ENST00000465312 DUOX1Q9NRD9 1551 aa22.97■■□□□ 1.27
SCAMP3-204ENST00000465312 HMMRO75330 724 aa22.97■■□□□ 1.27
SCAMP3-204ENST00000465312 G3BP1Q13283 466 aaKnown RBP eCLIP22.97■■□□□ 1.27
SCAMP3-204ENST00000465312 LEMD3Q9Y2U8 911 aa22.97■■□□□ 1.27
SCAMP3-204ENST00000465312 ZNF804BA4D1E1 1349 aa22.97■■□□□ 1.27
SCAMP3-204ENST00000465312 COPRSQ9NQ92 184 aa22.96■■□□□ 1.27
SCAMP3-204ENST00000465312 A0A1B0GUL6 1792 aa22.95■■□□□ 1.26
SCAMP3-204ENST00000465312 RPAP2Q8IXW5 612 aaPredicted RBP22.95■■□□□ 1.26
SCAMP3-204ENST00000465312 RIPOR2Q9Y4F9 1068 aa22.95■■□□□ 1.26
SCAMP3-204ENST00000465312 LTBP1Q14766 1721 aa22.94■■□□□ 1.26
SCAMP3-204ENST00000465312 SURF6O75683 361 aaKnown RBP22.94■■□□□ 1.26
SCAMP3-204ENST00000465312 CIAO1O76071 339 aa22.94■■□□□ 1.26
SCAMP3-204ENST00000465312 IL15P40933 162 aaPredicted RBP22.94■■□□□ 1.26
SCAMP3-204ENST00000465312 KIAA2012Q0VF49 1180 aa22.94■■□□□ 1.26
SCAMP3-204ENST00000465312 DOK7Q18PE1 504 aa22.94■■□□□ 1.26
SCAMP3-204ENST00000465312 SSH3Q8TE77 659 aa22.94■■□□□ 1.26
SCAMP3-204ENST00000465312 VPS33BQ9H267 617 aa22.94■■□□□ 1.26
SCAMP3-204ENST00000465312 CEP126Q9P2H0 1117 aa22.94■■□□□ 1.26
SCAMP3-204ENST00000465312 FBXO3Q9UK99 471 aa22.94■■□□□ 1.26
SCAMP3-204ENST00000465312 DICER1Q9UPY3 1922 aaKnown RBP22.94■■□□□ 1.26
SCAMP3-204ENST00000465312 WTIPA6NIX2 430 aaPredicted RBP22.93■■□□□ 1.26
SCAMP3-204ENST00000465312 SNAP23O00161 211 aa22.93■■□□□ 1.26
SCAMP3-204ENST00000465312 ZNF526Q8TF50 670 aaPredicted RBP22.93■■□□□ 1.26
SCAMP3-204ENST00000465312 DBNDD1Q9H9R9 158 aa22.93■■□□□ 1.26
SCAMP3-204ENST00000465312 EIF6P56537 245 aaKnown RBP22.92■■□□□ 1.26
SCAMP3-204ENST00000465312 POLA2Q14181 598 aa22.92■■□□□ 1.26
SCAMP3-204ENST00000465312 EXOC6Q8TAG9 804 aa22.92■■□□□ 1.26
SCAMP3-204ENST00000465312 MED23Q9ULK4 1368 aa22.91■■□□□ 1.26
SCAMP3-204ENST00000465312 PDE8BO95263 885 aa22.91■■□□□ 1.26
SCAMP3-204ENST00000465312 ATG9AQ7Z3C6 839 aa22.91■■□□□ 1.26
SCAMP3-204ENST00000465312 BCL11AQ9H165 835 aa22.91■■□□□ 1.26
SCAMP3-204ENST00000465312 ECE2O60344 883 aa22.9■■□□□ 1.26
SCAMP3-204ENST00000465312 PUM3Q15397 648 aaKnown RBP22.9■■□□□ 1.26
SCAMP3-204ENST00000465312 DPY19L2Q6NUT2 758 aa22.9■■□□□ 1.26
SCAMP3-204ENST00000465312 FBXW7Q969H0 707 aa22.9■■□□□ 1.26
SCAMP3-204ENST00000465312 ZC3H4Q9UPT8 1303 aaKnown RBP22.89■■□□□ 1.26
SCAMP3-204ENST00000465312 APBB1O00213 710 aa22.89■■□□□ 1.25
SCAMP3-204ENST00000465312 IFIT1P09914 478 aaKnown RBP22.89■■□□□ 1.25
SCAMP3-204ENST00000465312 SLC5A1P13866 664 aa22.89■■□□□ 1.25
SCAMP3-204ENST00000465312 KLRK1P26718 216 aa22.89■■□□□ 1.25
SCAMP3-204ENST00000465312 TFCP2Q12800 502 aa22.89■■□□□ 1.25
SCAMP3-204ENST00000465312 UBE4AQ14139 1066 aa22.89■■□□□ 1.25
SCAMP3-204ENST00000465312 VPS37DQ86XT2 251 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms