RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 CYP4F22Q6NT55 531 aa22.1■■□□□ 1.13
CPSF4-209ENST00000465132 PAXIP1Q6ZW49 1069 aaPredicted RBP22.1■■□□□ 1.13
CPSF4-209ENST00000465132 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.1■■□□□ 1.13
CPSF4-209ENST00000465132 CENPBP07199 599 aaPredicted RBP22.09■■□□□ 1.13
CPSF4-209ENST00000465132 HIRAP54198 1017 aaPredicted RBP22.09■■□□□ 1.13
CPSF4-209ENST00000465132 FKBP5Q13451 457 aaPredicted RBP22.09■■□□□ 1.13
CPSF4-209ENST00000465132 RTL5Q5HYW3 569 aaPredicted RBP22.09■■□□□ 1.13
CPSF4-209ENST00000465132 MRPL50Q8N5N7 158 aaKnown RBP22.09■■□□□ 1.13
CPSF4-209ENST00000465132 ZC3H15Q8WU90 426 aaKnown RBP22.09■■□□□ 1.13
CPSF4-209ENST00000465132 GLIS2Q9BZE0 524 aaPredicted RBP22.09■■□□□ 1.13
CPSF4-209ENST00000465132 CNOT7Q9UIV1 285 aaKnown RBP22.09■■□□□ 1.13
CPSF4-209ENST00000465132 NSFL1CQ9UNZ2 370 aaKnown RBP22.09■■□□□ 1.13
CPSF4-209ENST00000465132 IRS4O14654 1257 aaPredicted RBP22.08■■□□□ 1.13
CPSF4-209ENST00000465132 CELF2O95319 508 aaKnown RBP22.08■■□□□ 1.13
CPSF4-209ENST00000465132 MS4A1P11836 297 aa22.08■■□□□ 1.13
CPSF4-209ENST00000465132 GRM1Q13255 1194 aa22.08■■□□□ 1.13
CPSF4-209ENST00000465132 WASHC4Q2M389 1173 aa22.08■■□□□ 1.13
CPSF4-209ENST00000465132 RIC3Q7Z5B4 369 aa22.08■■□□□ 1.13
CPSF4-209ENST00000465132 TRPM4Q8TD43 1214 aa22.08■■□□□ 1.13
CPSF4-209ENST00000465132 ARHGAP45Q92619 1136 aa22.08■■□□□ 1.13
CPSF4-209ENST00000465132 GPR101Q96P66 508 aaPredicted RBP22.08■■□□□ 1.13
CPSF4-209ENST00000465132 TRPM7Q96QT4 1865 aa22.08■■□□□ 1.13
CPSF4-209ENST00000465132 THSD7BQ9C0I4 1608 aa22.08■■□□□ 1.13
CPSF4-209ENST00000465132 SHTN1A0MZ66 631 aa22.07■■□□□ 1.12
CPSF4-209ENST00000465132 GPSM2P81274 684 aa22.07■■□□□ 1.12
CPSF4-209ENST00000465132 NEXNQ0ZGT2 675 aa22.07■■□□□ 1.12
CPSF4-209ENST00000465132 KSR2Q6VAB6 950 aa22.07■■□□□ 1.12
CPSF4-209ENST00000465132 API5Q9BZZ5 524 aaKnown RBP22.07■■□□□ 1.12
CPSF4-209ENST00000465132 POLLQ9UGP5 575 aa22.07■■□□□ 1.12
CPSF4-209ENST00000465132 SAPCD2Q86UD0 394 aa22.06■■□□□ 1.12
CPSF4-209ENST00000465132 MICALL2Q8IY33 904 aa22.06■■□□□ 1.12
CPSF4-209ENST00000465132 PHAXQ9H814 394 aaKnown RBP22.06■■□□□ 1.12
CPSF4-209ENST00000465132 COL4A1P02462 1669 aa22.05■■□□□ 1.12
CPSF4-209ENST00000465132 C6orf229H3BNL8 230 aa22.05■■□□□ 1.12
CPSF4-209ENST00000465132 H7C1D1 291 aa22.05■■□□□ 1.12
CPSF4-209ENST00000465132 CDC37L1Q7L3B6 337 aa22.05■■□□□ 1.12
CPSF4-209ENST00000465132 ZBTB38Q8NAP3 1195 aaPredicted RBP22.05■■□□□ 1.12
CPSF4-209ENST00000465132 DPF2Q92785 391 aa22.05■■□□□ 1.12
CPSF4-209ENST00000465132 DBNDD1Q9H9R9 158 aa22.05■■□□□ 1.12
CPSF4-209ENST00000465132 ZBTB12Q9Y330 459 aaPredicted RBP22.05■■□□□ 1.12
CPSF4-209ENST00000465132 PSMD14O00487 310 aa22.04■■□□□ 1.12
CPSF4-209ENST00000465132 RIMBP2O15034 1052 aa22.04■■□□□ 1.12
CPSF4-209ENST00000465132 MAP2K2P36507 400 aa22.04■■□□□ 1.12
CPSF4-209ENST00000465132 RPS8P62241 208 aaKnown RBP22.04■■□□□ 1.12
CPSF4-209ENST00000465132 BEGAINQ9BUH8 593 aa22.04■■□□□ 1.12
CPSF4-209ENST00000465132 ZKSCAN2Q63HK3 967 aa22.03■■□□□ 1.12
CPSF4-209ENST00000465132 TBC1D16Q8TBP0 767 aa22.03■■□□□ 1.12
CPSF4-209ENST00000465132 HHIPL1Q96JK4 782 aa22.03■■□□□ 1.12
CPSF4-209ENST00000465132 EYA3Q99504 573 aa22.03■■□□□ 1.12
CPSF4-209ENST00000465132 ECE2O60344 883 aa22.02■■□□□ 1.12
CPSF4-209ENST00000465132 AOC2O75106 756 aa22.02■■□□□ 1.12
CPSF4-209ENST00000465132 FRAT1Q92837 279 aaPredicted RBP22.02■■□□□ 1.12
CPSF4-209ENST00000465132 ZNF408Q9H9D4 720 aa22.02■■□□□ 1.12
CPSF4-209ENST00000465132 PI4KAP2A4QPH2 592 aa22.01■■□□□ 1.11
CPSF4-209ENST00000465132 HSP90B1P14625 803 aaKnown RBP22.01■■□□□ 1.11
CPSF4-209ENST00000465132 DOK7Q18PE1 504 aa22.01■■□□□ 1.11
CPSF4-209ENST00000465132 SAMD7Q7Z3H4 446 aa22.01■■□□□ 1.11
CPSF4-209ENST00000465132 PI4KAP1Q8N8J0 262 aa22.01■■□□□ 1.11
CPSF4-209ENST00000465132 MYD88Q99836 296 aa22.01■■□□□ 1.11
CPSF4-209ENST00000465132 SEC31BQ9NQW1 1179 aa22.01■■□□□ 1.11
CPSF4-209ENST00000465132 KCNQ5Q9NR82 932 aa22.01■■□□□ 1.11
CPSF4-209ENST00000465132 NOB1Q9ULX3 412 aaKnown RBP22.01■■□□□ 1.11
CPSF4-209ENST00000465132 RTL9Q8NET4 1388 aa22■■□□□ 1.11
CPSF4-209ENST00000465132 RPS12P25398 132 aaKnown RBP22■■□□□ 1.11
CPSF4-209ENST00000465132 G2E3Q7L622 706 aa22■■□□□ 1.11
CPSF4-209ENST00000465132 USP48Q86UV5 1035 aa22■■□□□ 1.11
CPSF4-209ENST00000465132 CCDC191Q8NCU4 936 aa22■■□□□ 1.11
CPSF4-209ENST00000465132 DNAAF4Q8WXU2 420 aa22■■□□□ 1.11
CPSF4-209ENST00000465132 PODXL2Q9NZ53 605 aa22■■□□□ 1.11
CPSF4-209ENST00000465132 MAP3K2Q9Y2U5 619 aa22■■□□□ 1.11
CPSF4-209ENST00000465132 BCAR3O75815 825 aa21.99■■□□□ 1.11
CPSF4-209ENST00000465132 EGFRP00533 1210 aa21.99■■□□□ 1.11
CPSF4-209ENST00000465132 PCCAP05165 728 aaPredicted RBP21.99■■□□□ 1.11
CPSF4-209ENST00000465132 TBC1D10BQ4KMP7 808 aaPredicted RBP21.99■■□□□ 1.11
CPSF4-209ENST00000465132 METTL22Q9BUU2 404 aaPredicted RBP21.99■■□□□ 1.11
CPSF4-209ENST00000465132 ZC3H12CQ9C0D7 883 aaKnown RBP21.99■■□□□ 1.11
CPSF4-209ENST00000465132 CCDC152Q4G0S7 254 aa21.98■■□□□ 1.11
CPSF4-209ENST00000465132 ATF7IPQ6VMQ6 1270 aa21.98■■□□□ 1.11
CPSF4-209ENST00000465132 ABHD8Q96I13 439 aa21.98■■□□□ 1.11
CPSF4-209ENST00000465132 PDE8AO60658 829 aa21.97■■□□□ 1.11
CPSF4-209ENST00000465132 DLK2Q6UY11 383 aa21.97■■□□□ 1.11
CPSF4-209ENST00000465132 FTSJ3Q8IY81 847 aaKnown RBP21.97■■□□□ 1.11
CPSF4-209ENST00000465132 CWC25Q9NXE8 425 aaPredicted RBP21.97■■□□□ 1.11
CPSF4-209ENST00000465132 ANKIB1Q9P2G1 1089 aa21.97■■□□□ 1.11
CPSF4-209ENST00000465132 UFL1O94874 794 aa21.96■■□□□ 1.11
CPSF4-209ENST00000465132 CCT4P50991 539 aaKnown RBP21.96■■□□□ 1.11
CPSF4-209ENST00000465132 KRT26Q7Z3Y9 468 aa21.96■■□□□ 1.11
CPSF4-209ENST00000465132 LINS1Q8NG48 757 aa21.96■■□□□ 1.11
CPSF4-209ENST00000465132 JARID2Q92833 1246 aaPredicted RBP21.96■■□□□ 1.11
CPSF4-209ENST00000465132 TSKSQ9UJT2 592 aa21.96■■□□□ 1.11
CPSF4-209ENST00000465132 GGA1Q9UJY5 639 aa21.96■■□□□ 1.11
CPSF4-209ENST00000465132 CA12O43570 354 aa21.95■■□□□ 1.1
CPSF4-209ENST00000465132 VIL1P09327 827 aaKnown RBP21.95■■□□□ 1.1
CPSF4-209ENST00000465132 RBM26Q5T8P6 1007 aaKnown RBP21.95■■□□□ 1.1
CPSF4-209ENST00000465132 HDAC5Q9UQL6 1122 aa21.95■■□□□ 1.1
CPSF4-209ENST00000465132 ALDH1L1O75891 902 aa21.94■■□□□ 1.1
CPSF4-209ENST00000465132 HUNKP57058 714 aa21.94■■□□□ 1.1
CPSF4-209ENST00000465132 SLC4A10Q6U841 1118 aa21.94■■□□□ 1.1
CPSF4-209ENST00000465132 CCDC85AQ96PX6 553 aaPredicted RBP21.94■■□□□ 1.1
CPSF4-209ENST00000465132 SRCIN1Q9C0H9 1055 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms