RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 MVPQ14764 893 aaKnown RBP17.14■□□□□ 0.33
LIMD1-203ENST00000465039 TAF7LQ5H9L4 462 aa17.14■□□□□ 0.33
LIMD1-203ENST00000465039 ITPRIPQ8IWB1 547 aa17.14■□□□□ 0.33
LIMD1-203ENST00000465039 MINPP1Q9UNW1 487 aa17.14■□□□□ 0.33
LIMD1-203ENST00000465039 NSFL1CQ9UNZ2 370 aaKnown RBP17.14■□□□□ 0.33
LIMD1-203ENST00000465039 CHMP3Q9Y3E7 222 aa17.14■□□□□ 0.33
LIMD1-203ENST00000465039 A0A1B0GUL6 1792 aa17.13■□□□□ 0.33
LIMD1-203ENST00000465039 ATP2B4P23634 1241 aa17.13■□□□□ 0.33
LIMD1-203ENST00000465039 PRELPP51888 382 aa17.13■□□□□ 0.33
LIMD1-203ENST00000465039 JDP2Q8WYK2 163 aa17.13■□□□□ 0.33
LIMD1-203ENST00000465039 ANKIB1Q9P2G1 1089 aa17.13■□□□□ 0.33
LIMD1-203ENST00000465039 GGA1Q9UJY5 639 aa17.13■□□□□ 0.33
LIMD1-203ENST00000465039 TNNQ9UQP3 1299 aa17.13■□□□□ 0.33
LIMD1-203ENST00000465039 LEMD3Q9Y2U8 911 aa17.13■□□□□ 0.33
LIMD1-203ENST00000465039 LRRFIP2Q9Y608 721 aaKnown RBP17.13■□□□□ 0.33
LIMD1-203ENST00000465039 MED23Q9ULK4 1368 aa17.13■□□□□ 0.33
LIMD1-203ENST00000465039 ZBTB7BO15156 539 aaPredicted RBP17.12■□□□□ 0.33
LIMD1-203ENST00000465039 GPSM2P81274 684 aa17.12■□□□□ 0.33
LIMD1-203ENST00000465039 LDHAL6AQ6ZMR3 332 aa17.12■□□□□ 0.33
LIMD1-203ENST00000465039 TBC1D16Q8TBP0 767 aa17.12■□□□□ 0.33
LIMD1-203ENST00000465039 ZNF277Q9NRM2 450 aaPredicted RBP17.12■□□□□ 0.33
LIMD1-203ENST00000465039 MROH5Q6ZUA9 1318 aa17.12■□□□□ 0.33
LIMD1-203ENST00000465039 KDM2BQ8NHM5 1336 aa17.12■□□□□ 0.33
LIMD1-203ENST00000465039 FZD9O00144 591 aa17.11■□□□□ 0.33
LIMD1-203ENST00000465039 PPIP5K2O43314 1243 aa17.11■□□□□ 0.33
LIMD1-203ENST00000465039 CIAO1O76071 339 aa17.11■□□□□ 0.33
LIMD1-203ENST00000465039 LARGE2Q8N3Y3 721 aa17.11■□□□□ 0.33
LIMD1-203ENST00000465039 UFL1O94874 794 aa17.1■□□□□ 0.33
LIMD1-203ENST00000465039 RFX5P48382 616 aaPredicted RBP17.1■□□□□ 0.33
LIMD1-203ENST00000465039 WASHC4Q2M389 1173 aa17.1■□□□□ 0.33
LIMD1-203ENST00000465039 C15orf52Q6ZUT6 534 aaKnown RBP17.1■□□□□ 0.33
LIMD1-203ENST00000465039 NIM1KQ8IY84 436 aa17.1■□□□□ 0.33
LIMD1-203ENST00000465039 PANK1Q8TE04 598 aa17.1■□□□□ 0.33
LIMD1-203ENST00000465039 COPRSQ9NQ92 184 aa17.1■□□□□ 0.33
LIMD1-203ENST00000465039 CNNM1Q9NRU3 951 aa17.1■□□□□ 0.33
LIMD1-203ENST00000465039 POLLQ9UGP5 575 aa17.1■□□□□ 0.33
LIMD1-203ENST00000465039 RRP1P56182 461 aaKnown RBP17.09■□□□□ 0.33
LIMD1-203ENST00000465039 CHRNDQ07001 517 aa17.09■□□□□ 0.33
LIMD1-203ENST00000465039 DPY19L2Q6NUT2 758 aa17.09■□□□□ 0.33
LIMD1-203ENST00000465039 ZNRF3Q9ULT6 936 aa17.09■□□□□ 0.33
LIMD1-203ENST00000465039 RIPOR2Q9Y4F9 1068 aa17.09■□□□□ 0.33
LIMD1-203ENST00000465039 COL4A5P29400 1685 aa17.08■□□□□ 0.32
LIMD1-203ENST00000465039 ZNF609O15014 1411 aa17.08■□□□□ 0.32
LIMD1-203ENST00000465039 GLTPD2A6NH11 291 aa17.08■□□□□ 0.32
LIMD1-203ENST00000465039 C6orf229H3BNL8 230 aa17.08■□□□□ 0.32
LIMD1-203ENST00000465039 EYA2O00167 538 aa17.08■□□□□ 0.32
LIMD1-203ENST00000465039 PTPN12Q05209 780 aaKnown RBP17.08■□□□□ 0.32
LIMD1-203ENST00000465039 ZC3H12CQ9C0D7 883 aaKnown RBP17.08■□□□□ 0.32
LIMD1-203ENST00000465039 WDR90Q96KV7 1748 aa17.07■□□□□ 0.32
LIMD1-203ENST00000465039 ZNF804BA4D1E1 1349 aa17.07■□□□□ 0.32
LIMD1-203ENST00000465039 SRGAP3O43295 1099 aa17.07■□□□□ 0.32
LIMD1-203ENST00000465039 AOC3Q16853 763 aa17.07■□□□□ 0.32
LIMD1-203ENST00000465039 SLC51AQ86UW1 340 aa17.07■□□□□ 0.32
LIMD1-203ENST00000465039 GPC2Q8N158 579 aa17.07■□□□□ 0.32
LIMD1-203ENST00000465039 ZNF784Q8NCA9 323 aaPredicted RBP17.07■□□□□ 0.32
LIMD1-203ENST00000465039 ZBTB40Q9NUA8 1239 aa17.07■□□□□ 0.32
LIMD1-203ENST00000465039 IL15P40933 162 aaPredicted RBP17.06■□□□□ 0.32
LIMD1-203ENST00000465039 EIF6P56537 245 aaKnown RBP17.06■□□□□ 0.32
LIMD1-203ENST00000465039 AAMPQ13685 434 aa17.06■□□□□ 0.32
LIMD1-203ENST00000465039 UBE4AQ14139 1066 aa17.06■□□□□ 0.32
LIMD1-203ENST00000465039 ZNF594Q96JF6 807 aaPredicted RBP17.06■□□□□ 0.32
LIMD1-203ENST00000465039 L3MBTL3Q96JM7 780 aaPredicted RBP17.06■□□□□ 0.32
LIMD1-203ENST00000465039 PLIN1O60240 522 aa17.05■□□□□ 0.32
LIMD1-203ENST00000465039 KCNJ4P48050 445 aa17.05■□□□□ 0.32
LIMD1-203ENST00000465039 POLA2Q14181 598 aa17.05■□□□□ 0.32
LIMD1-203ENST00000465039 PODNQ7Z5L7 613 aa17.05■□□□□ 0.32
LIMD1-203ENST00000465039 VGLL2Q8N8G2 317 aa17.05■□□□□ 0.32
LIMD1-203ENST00000465039 SSH3Q8TE77 659 aa17.05■□□□□ 0.32
LIMD1-203ENST00000465039 GPBP1L1Q9HC44 474 aaPredicted RBP17.05■□□□□ 0.32
LIMD1-203ENST00000465039 COG6Q9Y2V7 657 aa17.05■□□□□ 0.32
LIMD1-203ENST00000465039 PSME4Q14997 1843 aa17.05■□□□□ 0.32
LIMD1-203ENST00000465039 PDE8BO95263 885 aa17.04■□□□□ 0.32
LIMD1-203ENST00000465039 ATP8B2P98198 1209 aa17.04■□□□□ 0.32
LIMD1-203ENST00000465039 RPAP2Q8IXW5 612 aaPredicted RBP17.04■□□□□ 0.32
LIMD1-203ENST00000465039 COA1Q9GZY4 146 aa17.04■□□□□ 0.32
LIMD1-203ENST00000465039 SCN4AP35499 1836 aa17.04■□□□□ 0.32
LIMD1-203ENST00000465039 IRS2Q9Y4H2 1338 aa17.03■□□□□ 0.32
LIMD1-203ENST00000465039 ZBTB22O15209 634 aa17.03■□□□□ 0.32
LIMD1-203ENST00000465039 TNIP1Q15025 636 aa17.03■□□□□ 0.32
LIMD1-203ENST00000465039 PUM3Q15397 648 aaKnown RBP17.03■□□□□ 0.32
LIMD1-203ENST00000465039 METTL24Q5JXM2 366 aa17.03■□□□□ 0.32
LIMD1-203ENST00000465039 ZNF541Q9H0D2 1346 aa17.02■□□□□ 0.32
LIMD1-203ENST00000465039 IQCA1LA6NCM1 817 aa17.02■□□□□ 0.32
LIMD1-203ENST00000465039 HMMRO75330 724 aa17.02■□□□□ 0.32
LIMD1-203ENST00000465039 CEP85Q6P2H3 762 aa17.02■□□□□ 0.32
LIMD1-203ENST00000465039 ATG9AQ7Z3C6 839 aa17.02■□□□□ 0.32
LIMD1-203ENST00000465039 PUS3Q9BZE2 481 aaKnown RBP17.02■□□□□ 0.32
LIMD1-203ENST00000465039 PNMA6EA0A0J9YXQ4 647 aa17.01■□□□□ 0.31
LIMD1-203ENST00000465039 ECE2O60344 883 aa17.01■□□□□ 0.31
LIMD1-203ENST00000465039 LRRC24Q50LG9 513 aa17.01■□□□□ 0.31
LIMD1-203ENST00000465039 C20orf194Q5TEA3 1177 aa17.01■□□□□ 0.31
LIMD1-203ENST00000465039 ZNF804AQ7Z570 1209 aa17.01■□□□□ 0.31
LIMD1-203ENST00000465039 KLHDC4Q8TBB5 520 aa17.01■□□□□ 0.31
LIMD1-203ENST00000465039 NOP58Q9Y2X3 529 aaKnown RBP17.01■□□□□ 0.31
LIMD1-203ENST00000465039 G3V3G9 751 aa17■□□□□ 0.31
LIMD1-203ENST00000465039 VEGFAP15692 232 aaPredicted RBP17■□□□□ 0.31
LIMD1-203ENST00000465039 RPS12P25398 132 aaKnown RBP17■□□□□ 0.31
LIMD1-203ENST00000465039 MMP14P50281 582 aa17■□□□□ 0.31
LIMD1-203ENST00000465039 CXCL9Q07325 125 aa17■□□□□ 0.31
LIMD1-203ENST00000465039 DCAF8Q5TAQ9 597 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms