RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 NIM1KQ8IY84 436 aa12.83□□□□□ -0.36
APP-213ENST00000464867 ZC3H15Q8WU90 426 aaKnown RBP12.83□□□□□ -0.36
APP-213ENST00000464867 SLC4A5Q9BY07 1137 aa12.83□□□□□ -0.36
APP-213ENST00000464867 LGR6Q9HBX8 967 aa12.83□□□□□ -0.36
APP-213ENST00000464867 GPRC5DQ9NZD1 345 aa12.83□□□□□ -0.36
APP-213ENST00000464867 ZNF652Q9Y2D9 606 aa12.83□□□□□ -0.36
APP-213ENST00000464867 RNMTO43148 476 aaKnown RBP12.82□□□□□ -0.36
APP-213ENST00000464867 GTF2E1P29083 439 aaPredicted RBP12.82□□□□□ -0.36
APP-213ENST00000464867 KIF23Q02241 960 aaPredicted RBP12.82□□□□□ -0.36
APP-213ENST00000464867 KLRG2A4D1S0 409 aaPredicted RBP12.81□□□□□ -0.36
APP-213ENST00000464867 CAMTA2O94983 1202 aa12.81□□□□□ -0.36
APP-213ENST00000464867 DZIP3Q86Y13 1208 aaKnown RBP12.81□□□□□ -0.36
APP-213ENST00000464867 TMX4Q9H1E5 349 aaPredicted RBP12.81□□□□□ -0.36
APP-213ENST00000464867 FXR1P51114 621 aaKnown RBP eCLIP12.8□□□□□ -0.36
APP-213ENST00000464867 ZNF157P51786 506 aaPredicted RBP12.8□□□□□ -0.36
APP-213ENST00000464867 TYW1BQ6NUM6 668 aa12.8□□□□□ -0.36
APP-213ENST00000464867 CLEC4GQ6UXB4 293 aa12.8□□□□□ -0.36
APP-213ENST00000464867 C2orf69Q8N8R5 385 aa12.8□□□□□ -0.36
APP-213ENST00000464867 PGAP2Q9UHJ9 254 aa12.8□□□□□ -0.36
APP-213ENST00000464867 MRC1P22897 1456 aa12.79□□□□□ -0.36
APP-213ENST00000464867 UBR2Q8IWV8 1755 aa12.79□□□□□ -0.36
APP-213ENST00000464867 BHMG1C9JSJ3 638 aaPredicted RBP12.79□□□□□ -0.36
APP-213ENST00000464867 COL9A1P20849 921 aa12.79□□□□□ -0.36
APP-213ENST00000464867 BCL2L13Q9BXK5 485 aa12.79□□□□□ -0.36
APP-213ENST00000464867 FAM155AB1AL88 458 aaPredicted RBP12.78□□□□□ -0.36
APP-213ENST00000464867 PPIP5K2O43314 1243 aa12.77□□□□□ -0.37
APP-213ENST00000464867 USP48Q86UV5 1035 aa12.77□□□□□ -0.37
APP-213ENST00000464867 DDX12PQ92771 950 aa12.77□□□□□ -0.37
APP-213ENST00000464867 FBXW7Q969H0 707 aa12.77□□□□□ -0.37
APP-213ENST00000464867 KCTD12Q96CX2 325 aaKnown RBP12.77□□□□□ -0.37
APP-213ENST00000464867 GBA2Q9HCG7 927 aaPredicted RBP12.77□□□□□ -0.37
APP-213ENST00000464867 NIP7Q9Y221 180 aaKnown RBP eCLIP12.77□□□□□ -0.37
APP-213ENST00000464867 CDHR2Q9BYE9 1310 aa12.77□□□□□ -0.37
APP-213ENST00000464867 FAM177BA6PVY3 158 aa12.76□□□□□ -0.37
APP-213ENST00000464867 H7C1D1 291 aa12.76□□□□□ -0.37
APP-213ENST00000464867 A1BGP04217 495 aa12.76□□□□□ -0.37
APP-213ENST00000464867 GMPSP49915 693 aaPredicted RBP12.76□□□□□ -0.37
APP-213ENST00000464867 E2F4Q16254 413 aa12.76□□□□□ -0.37
APP-213ENST00000464867 FBXO46Q6PJ61 603 aaPredicted RBP12.76□□□□□ -0.37
APP-213ENST00000464867 SLC17A8Q8NDX2 589 aa12.76□□□□□ -0.37
APP-213ENST00000464867 RPGRQ92834 1020 aaKnown RBP12.76□□□□□ -0.37
APP-213ENST00000464867 ZNF496Q96IT1 587 aaPredicted RBP12.76□□□□□ -0.37
APP-213ENST00000464867 CSRNP1Q96S65 589 aa12.76□□□□□ -0.37
APP-213ENST00000464867 VPS33BQ9H267 617 aa12.76□□□□□ -0.37
APP-213ENST00000464867 HCSTQ9UBK5 93 aa12.76□□□□□ -0.37
APP-213ENST00000464867 ZNRF3Q9ULT6 936 aa12.76□□□□□ -0.37
APP-213ENST00000464867 HEG1Q9ULI3 1381 aa12.76□□□□□ -0.37
APP-213ENST00000464867 COL4A5P29400 1685 aa12.76□□□□□ -0.37
APP-213ENST00000464867 PPP1R3GB7ZBB8 358 aa12.75□□□□□ -0.37
APP-213ENST00000464867 CXCL9Q07325 125 aa12.75□□□□□ -0.37
APP-213ENST00000464867 TNIP1Q15025 636 aa12.75□□□□□ -0.37
APP-213ENST00000464867 PDIA6Q15084 440 aa12.75□□□□□ -0.37
APP-213ENST00000464867 FMNL2Q96PY5 1086 aa12.75□□□□□ -0.37
APP-213ENST00000464867 NPC1L1Q9UHC9 1359 aa12.75□□□□□ -0.37
APP-213ENST00000464867 TEFQ10587 303 aa12.74□□□□□ -0.37
APP-213ENST00000464867 PROX2Q3B8N5 592 aa12.74□□□□□ -0.37
APP-213ENST00000464867 ZNF790Q6PG37 636 aa12.74□□□□□ -0.37
APP-213ENST00000464867 CUL9Q8IWT3 2517 aa12.73□□□□□ -0.37
APP-213ENST00000464867 SNED1Q8TER0 1413 aa12.73□□□□□ -0.37
APP-213ENST00000464867 HIRAP54198 1017 aaPredicted RBP12.73□□□□□ -0.37
APP-213ENST00000464867 AOC3Q16853 763 aa12.73□□□□□ -0.37
APP-213ENST00000464867 KRT26Q7Z3Y9 468 aa12.73□□□□□ -0.37
APP-213ENST00000464867 SUPT20HQ8NEM7 779 aa12.73□□□□□ -0.37
APP-213ENST00000464867 ZNF296Q8WUU4 475 aaPredicted RBP12.73□□□□□ -0.37
APP-213ENST00000464867 EPAS1Q99814 870 aa12.73□□□□□ -0.37
APP-213ENST00000464867 CNOT7Q9UIV1 285 aaKnown RBP12.73□□□□□ -0.37
APP-213ENST00000464867 POLR2AP24928 1970 aaKnown RBP12.72□□□□□ -0.37
APP-213ENST00000464867 TCERG1O14776 1098 aaKnown RBP12.72□□□□□ -0.37
APP-213ENST00000464867 SLC10A3P09131 477 aa12.72□□□□□ -0.37
APP-213ENST00000464867 CRY2Q49AN0 593 aa12.72□□□□□ -0.37
APP-213ENST00000464867 INTS3Q68E01 1043 aaKnown RBP12.72□□□□□ -0.37
APP-213ENST00000464867 DCPSQ96C86 337 aaKnown RBP12.72□□□□□ -0.37
APP-213ENST00000464867 RBM17Q96I25 401 aaKnown RBP12.72□□□□□ -0.37
APP-213ENST00000464867 NYXQ9GZU5 481 aa12.72□□□□□ -0.37
APP-213ENST00000464867 PPEF1O14829 653 aaPredicted RBP12.71□□□□□ -0.37
APP-213ENST00000464867 C6orf132Q5T0Z8 1188 aa12.71□□□□□ -0.37
APP-213ENST00000464867 TRPM4Q8TD43 1214 aa12.71□□□□□ -0.37
APP-213ENST00000464867 WDR70Q9NW82 654 aa12.71□□□□□ -0.37
APP-213ENST00000464867 HOXA10P31260 410 aaPredicted RBP12.7□□□□□ -0.38
APP-213ENST00000464867 IL13P35225 146 aa12.7□□□□□ -0.38
APP-213ENST00000464867 MTHFSDQ2M296 383 aaKnown RBP12.7□□□□□ -0.38
APP-213ENST00000464867 TSHZ2Q9NRE2 1034 aa12.7□□□□□ -0.38
APP-213ENST00000464867 CEP290O15078 2479 aa12.7□□□□□ -0.38
APP-213ENST00000464867 TRIOBPQ9H2D6 2365 aa12.7□□□□□ -0.38
APP-213ENST00000464867 KIF7Q2M1P5 1343 aa12.69□□□□□ -0.38
APP-213ENST00000464867 RAD17O75943 681 aa12.69□□□□□ -0.38
APP-213ENST00000464867 TBC1D8O95759 1140 aa12.69□□□□□ -0.38
APP-213ENST00000464867 MORC1Q86VD1 984 aa12.69□□□□□ -0.38
APP-213ENST00000464867 CRAMP1Q96RY5 1269 aa12.69□□□□□ -0.38
APP-213ENST00000464867 ARIH1Q9Y4X5 557 aaPredicted RBP12.69□□□□□ -0.38
APP-213ENST00000464867 GPR25O00155 361 aa12.68□□□□□ -0.38
APP-213ENST00000464867 HMOX1P09601 288 aa12.68□□□□□ -0.38
APP-213ENST00000464867 PIP4K2AP48426 406 aaPredicted RBP12.68□□□□□ -0.38
APP-213ENST00000464867 DLK2Q6UY11 383 aa12.68□□□□□ -0.38
APP-213ENST00000464867 SULF1Q8IWU6 871 aa12.68□□□□□ -0.38
APP-213ENST00000464867 MRPL50Q8N5N7 158 aaKnown RBP12.68□□□□□ -0.38
APP-213ENST00000464867 POLR3GLQ9BT43 218 aa12.68□□□□□ -0.38
APP-213ENST00000464867 SPDYE16A6NNV3 312 aaPredicted RBP12.67□□□□□ -0.38
APP-213ENST00000464867 NBR1Q14596 966 aa12.67□□□□□ -0.38
APP-213ENST00000464867 NOM1Q5C9Z4 860 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms