RNA–Protein interactions for RNA: ENST00000464576.1

PTPN18-209, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 5

Gene PTPN18, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-209ENST00000464576 HHIPL1Q96JK4 782 aa12.17□□□□□ -0.46
PTPN18-209ENST00000464576 CWC25Q9NXE8 425 aaPredicted RBP12.17□□□□□ -0.46
PTPN18-209ENST00000464576 PGAP2Q9UHJ9 254 aa12.17□□□□□ -0.46
PTPN18-209ENST00000464576 POLR2AP24928 1970 aaKnown RBP12.17□□□□□ -0.46
PTPN18-209ENST00000464576 LRRC37AA6NMS7 1700 aa12.17□□□□□ -0.46
PTPN18-209ENST00000464576 UFL1O94874 794 aa12.16□□□□□ -0.46
PTPN18-209ENST00000464576 HIRAP54198 1017 aaPredicted RBP12.16□□□□□ -0.46
PTPN18-209ENST00000464576 HUNKP57058 714 aa12.16□□□□□ -0.46
PTPN18-209ENST00000464576 NEXNQ0ZGT2 675 aa12.16□□□□□ -0.46
PTPN18-209ENST00000464576 SAMD7Q7Z3H4 446 aa12.16□□□□□ -0.46
PTPN18-209ENST00000464576 TBC1D16Q8TBP0 767 aa12.16□□□□□ -0.46
PTPN18-209ENST00000464576 ABHD8Q96I13 439 aa12.16□□□□□ -0.46
PTPN18-209ENST00000464576 PHAXQ9H814 394 aaKnown RBP12.16□□□□□ -0.46
PTPN18-209ENST00000464576 PRKRIP1Q9H875 184 aaPredicted RBP12.16□□□□□ -0.46
PTPN18-209ENST00000464576 POLLQ9UGP5 575 aa12.16□□□□□ -0.46
PTPN18-209ENST00000464576 GGA1Q9UJY5 639 aa12.16□□□□□ -0.46
PTPN18-209ENST00000464576 CCDC85CA6NKD9 419 aa12.15□□□□□ -0.46
PTPN18-209ENST00000464576 PDE8AO60658 829 aa12.15□□□□□ -0.46
PTPN18-209ENST00000464576 NOGQ13253 232 aa12.15□□□□□ -0.46
PTPN18-209ENST00000464576 ANKRD18AQ8IVF6 992 aa12.15□□□□□ -0.46
PTPN18-209ENST00000464576 SULF1Q8IWU6 871 aa12.15□□□□□ -0.46
PTPN18-209ENST00000464576 CCDC85AQ96PX6 553 aaPredicted RBP12.15□□□□□ -0.46
PTPN18-209ENST00000464576 STK31Q9BXU1 1019 aa12.15□□□□□ -0.46
PTPN18-209ENST00000464576 TSKSQ9UJT2 592 aa12.15□□□□□ -0.46
PTPN18-209ENST00000464576 SHTN1A0MZ66 631 aa12.14□□□□□ -0.47
PTPN18-209ENST00000464576 PCCAP05165 728 aaPredicted RBP12.14□□□□□ -0.47
PTPN18-209ENST00000464576 ZNF853P0CG23 659 aa12.14□□□□□ -0.47
PTPN18-209ENST00000464576 BRPF1P55201 1214 aaPredicted RBP12.14□□□□□ -0.47
PTPN18-209ENST00000464576 DUOX1Q9NRD9 1551 aa12.13□□□□□ -0.47
PTPN18-209ENST00000464576 CASP8AP2Q9UKL3 1982 aa12.13□□□□□ -0.47
PTPN18-209ENST00000464576 THSD7BQ9C0I4 1608 aa12.13□□□□□ -0.47
PTPN18-209ENST00000464576 KIF4BQ2VIQ3 1234 aa12.13□□□□□ -0.47
PTPN18-209ENST00000464576 JARID2Q92833 1246 aaPredicted RBP12.13□□□□□ -0.47
PTPN18-209ENST00000464576 CCDC102AQ96A19 550 aa12.13□□□□□ -0.47
PTPN18-209ENST00000464576 CDC5LQ99459 802 aaKnown RBP12.13□□□□□ -0.47
PTPN18-209ENST00000464576 METTL22Q9BUU2 404 aaPredicted RBP12.13□□□□□ -0.47
PTPN18-209ENST00000464576 GBA2Q9HCG7 927 aaPredicted RBP12.13□□□□□ -0.47
PTPN18-209ENST00000464576 SEC31BQ9NQW1 1179 aa12.13□□□□□ -0.47
PTPN18-209ENST00000464576 KCNQ5Q9NR82 932 aa12.13□□□□□ -0.47
PTPN18-209ENST00000464576 PODXL2Q9NZ53 605 aa12.13□□□□□ -0.47
PTPN18-209ENST00000464576 MAP3K2Q9Y2U5 619 aa12.13□□□□□ -0.47
PTPN18-209ENST00000464576 XDHP47989 1333 aa12.12□□□□□ -0.47
PTPN18-209ENST00000464576 ZNF157P51786 506 aaPredicted RBP12.12□□□□□ -0.47
PTPN18-209ENST00000464576 RGMBQ6NW40 437 aa12.12□□□□□ -0.47
PTPN18-209ENST00000464576 C8orf58Q8NAV2 365 aa12.12□□□□□ -0.47
PTPN18-209ENST00000464576 VIL1P09327 827 aaKnown RBP12.11□□□□□ -0.47
PTPN18-209ENST00000464576 ATP2B4P23634 1241 aa12.11□□□□□ -0.47
PTPN18-209ENST00000464576 KSR2Q6VAB6 950 aa12.11□□□□□ -0.47
PTPN18-209ENST00000464576 AGBL3Q8NEM8 1001 aa12.11□□□□□ -0.47
PTPN18-209ENST00000464576 FBXW7Q969H0 707 aa12.11□□□□□ -0.47
PTPN18-209ENST00000464576 GGA3Q9NZ52 723 aa12.11□□□□□ -0.47
PTPN18-209ENST00000464576 MYH3P11055 1940 aa12.11□□□□□ -0.47
PTPN18-209ENST00000464576 AKAP11Q9UKA4 1901 aa12.11□□□□□ -0.47
PTPN18-209ENST00000464576 RTL9Q8NET4 1388 aa12.1□□□□□ -0.47
PTPN18-209ENST00000464576 PI4KAP2A4QPH2 592 aa12.1□□□□□ -0.47
PTPN18-209ENST00000464576 USP17L3A6NCW0 530 aa12.1□□□□□ -0.47
PTPN18-209ENST00000464576 USP17L4A6NCW7 530 aa12.1□□□□□ -0.47
PTPN18-209ENST00000464576 ADM5C9JUS6 153 aa12.1□□□□□ -0.47
PTPN18-209ENST00000464576 USP17L8P0C7I0 530 aa12.1□□□□□ -0.47
PTPN18-209ENST00000464576 RSBN1LQ6PCB5 846 aaPredicted RBP12.1□□□□□ -0.47
PTPN18-209ENST00000464576 USP17L1Q7RTZ2 530 aa12.1□□□□□ -0.47
PTPN18-209ENST00000464576 PODNQ7Z5L7 613 aa12.1□□□□□ -0.47
PTPN18-209ENST00000464576 OGFOD1Q8N543 542 aa12.1□□□□□ -0.47
PTPN18-209ENST00000464576 PI4KAP1Q8N8J0 262 aa12.1□□□□□ -0.47
PTPN18-209ENST00000464576 EGFRP00533 1210 aa12.09□□□□□ -0.47
PTPN18-209ENST00000464576 IGHMBP2P38935 993 aaKnown RBP12.09□□□□□ -0.47
PTPN18-209ENST00000464576 CTSWP56202 376 aa12.09□□□□□ -0.47
PTPN18-209ENST00000464576 DGKZQ13574 1117 aa12.09□□□□□ -0.47
PTPN18-209ENST00000464576 SCARF1Q14162 830 aa12.09□□□□□ -0.47
PTPN18-209ENST00000464576 ANGEL2Q5VTE6 544 aaKnown RBP12.09□□□□□ -0.47
PTPN18-209ENST00000464576 DLK2Q6UY11 383 aa12.09□□□□□ -0.47
PTPN18-209ENST00000464576 SPEF2Q9C093 1822 aa12.09□□□□□ -0.47
PTPN18-209ENST00000464576 SCN9AQ15858 1988 aa12.09□□□□□ -0.47
PTPN18-209ENST00000464576 SLC4A2P04920 1241 aa12.08□□□□□ -0.48
PTPN18-209ENST00000464576 KCNJ4P48050 445 aa12.08□□□□□ -0.48
PTPN18-209ENST00000464576 MLLT1Q03111 559 aaPredicted RBP12.08□□□□□ -0.48
PTPN18-209ENST00000464576 TTLL12Q14166 644 aaPredicted RBP12.08□□□□□ -0.48
PTPN18-209ENST00000464576 TWISTNBQ3B726 338 aaPredicted RBP12.08□□□□□ -0.48
PTPN18-209ENST00000464576 TSR2Q969E8 191 aaKnown RBP12.08□□□□□ -0.48
PTPN18-209ENST00000464576 MCOLN1Q9GZU1 580 aa12.08□□□□□ -0.48
PTPN18-209ENST00000464576 MYOZ2Q9NPC6 264 aa12.08□□□□□ -0.48
PTPN18-209ENST00000464576 NF2P35240 595 aa12.07□□□□□ -0.48
PTPN18-209ENST00000464576 KIF23Q02241 960 aaPredicted RBP12.07□□□□□ -0.48
PTPN18-209ENST00000464576 FAM161AQ3B820 660 aa12.07□□□□□ -0.48
PTPN18-209ENST00000464576 UBE3BQ7Z3V4 1068 aa12.07□□□□□ -0.48
PTPN18-209ENST00000464576 REM2Q8IYK8 340 aaPredicted RBP12.07□□□□□ -0.48
PTPN18-209ENST00000464576 TSPYL6Q8N831 410 aa12.07□□□□□ -0.48
PTPN18-209ENST00000464576 CDCA5Q96FF9 252 aa12.07□□□□□ -0.48
PTPN18-209ENST00000464576 MPHOSPH8Q99549 860 aa12.07□□□□□ -0.48
PTPN18-209ENST00000464576 MYH16Q9H6N6 1097 aa12.07□□□□□ -0.48
PTPN18-209ENST00000464576 BSDC1Q9NW68 430 aaPredicted RBP12.07□□□□□ -0.48
PTPN18-209ENST00000464576 PSME4Q14997 1843 aa12.07□□□□□ -0.48
PTPN18-209ENST00000464576 COL4A1P02462 1669 aa12.06□□□□□ -0.48
PTPN18-209ENST00000464576 TRPA1O75762 1119 aa12.06□□□□□ -0.48
PTPN18-209ENST00000464576 CCT4P50991 539 aaKnown RBP12.06□□□□□ -0.48
PTPN18-209ENST00000464576 ZNF280AP59817 542 aaPredicted RBP12.06□□□□□ -0.48
PTPN18-209ENST00000464576 FKBP5Q13451 457 aaPredicted RBP12.06□□□□□ -0.48
PTPN18-209ENST00000464576 CWF19L2Q2TBE0 894 aaKnown RBP12.06□□□□□ -0.48
PTPN18-209ENST00000464576 TTLL11Q8NHH1 800 aa12.06□□□□□ -0.48
PTPN18-209ENST00000464576 ANKRD2Q9GZV1 360 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms