RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 STK31Q9BXU1 1019 aa8.56□□□□□ -1.04
CLSTN1-204ENST00000464286 ANO2Q9NQ90 1003 aa8.56□□□□□ -1.04
CLSTN1-204ENST00000464286 SMC3Q9UQE7 1217 aa8.56□□□□□ -1.04
CLSTN1-204ENST00000464286 PXDNLA1KZ92 1463 aa8.56□□□□□ -1.04
CLSTN1-204ENST00000464286 CHL1O00533 1208 aa8.55□□□□□ -1.04
CLSTN1-204ENST00000464286 CTIFO43310 598 aaKnown RBP8.55□□□□□ -1.04
CLSTN1-204ENST00000464286 GJA5P36382 358 aa8.55□□□□□ -1.04
CLSTN1-204ENST00000464286 SKOR1P84550 965 aa8.55□□□□□ -1.04
CLSTN1-204ENST00000464286 MTMR2Q13614 643 aa8.55□□□□□ -1.04
CLSTN1-204ENST00000464286 PKP1Q13835 747 aa8.55□□□□□ -1.04
CLSTN1-204ENST00000464286 KIAA1524Q8TCG1 905 aa8.55□□□□□ -1.04
CLSTN1-204ENST00000464286 ANKRD7Q92527 254 aa8.55□□□□□ -1.04
CLSTN1-204ENST00000464286 PRAM1Q96QH2 718 aa8.55□□□□□ -1.04
CLSTN1-204ENST00000464286 TSPYL1Q9H0U9 437 aa8.55□□□□□ -1.04
CLSTN1-204ENST00000464286 LIMCH1Q9UPQ0 1083 aa8.55□□□□□ -1.04
CLSTN1-204ENST00000464286 MON2Q7Z3U7 1717 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 PREX1Q8TCU6 1659 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 MSH6P52701 1360 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 RPAP1Q9BWH6 1393 aaPredicted RBP8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 SPTLC1O15269 473 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 STX6O43752 255 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 NRDCO43847 1150 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 CHMLP26374 656 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 HSPA4P34932 840 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 GGT6Q6P531 493 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 TSPYL6Q8N831 410 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 C8orf58Q8NAV2 365 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 PRR7Q8TB68 274 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 FAM200AQ8TCP9 573 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 CHMP4CQ96CF2 233 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 SIRT1Q96EB6 747 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 MRGPRX2Q96LB1 330 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 AAASQ9NRG9 546 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 BABAM1Q9NWV8 329 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 ALKQ9UM73 1620 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 ELP1O95163 1332 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 TTC21BQ7Z4L5 1316 aa8.54□□□□□ -1.04
CLSTN1-204ENST00000464286 CHD2O14647 1828 aaKnown RBP8.53□□□□□ -1.04
CLSTN1-204ENST00000464286 HIP1O00291 1037 aa8.53□□□□□ -1.04
CLSTN1-204ENST00000464286 ST8SIA5O15466 376 aa8.53□□□□□ -1.04
CLSTN1-204ENST00000464286 F13A1P00488 732 aa8.53□□□□□ -1.04
CLSTN1-204ENST00000464286 AVPP01185 164 aa8.53□□□□□ -1.04
CLSTN1-204ENST00000464286 ANKRD1Q15327 319 aa8.53□□□□□ -1.04
CLSTN1-204ENST00000464286 CNTROBQ8N137 903 aa8.53□□□□□ -1.04
CLSTN1-204ENST00000464286 TM6SF1Q9BZW5 370 aa8.53□□□□□ -1.04
CLSTN1-204ENST00000464286 SCAND2PQ9GZW5 306 aaPredicted RBP8.53□□□□□ -1.04
CLSTN1-204ENST00000464286 DDX19AQ9NUU7 478 aaKnown RBP8.53□□□□□ -1.04
CLSTN1-204ENST00000464286 CABP1Q9NZU7 370 aa8.53□□□□□ -1.04
CLSTN1-204ENST00000464286 SIGLEC1Q9BZZ2 1709 aa8.53□□□□□ -1.04
CLSTN1-204ENST00000464286 AKAP12Q02952 1782 aa8.53□□□□□ -1.04
CLSTN1-204ENST00000464286 SPATA31D1Q6ZQQ2 1576 aa8.52□□□□□ -1.04
CLSTN1-204ENST00000464286 TTC24A2A3L6 582 aaPredicted RBP8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 GOLGA6L4A6NEF3 574 aa8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 SPDYE5A6NIY4 337 aa8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 POTECB2RU33 542 aa8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 HMOX1P09601 288 aa8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 CDC25BP30305 580 aa8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 WNT7BP56706 349 aa8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 KRT85P78386 507 aa8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 ATP8B2P98198 1209 aa8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 MAP3K11Q16584 847 aa8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 PTPRNQ16849 979 aa8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 RC3H1Q5TC82 1133 aaKnown RBP8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 ZNF771Q7L3S4 317 aaPredicted RBP8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 RIC3Q7Z5B4 369 aa8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 CCDC112Q8NEF3 446 aa8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 SNIP1Q8TAD8 396 aaKnown RBP8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 GPATCH3Q96I76 525 aa8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 PHACTR3Q96KR7 559 aa8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 STK26Q9P289 416 aa8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 ADGRL3Q9HAR2 1447 aa8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 RAD50Q92878 1312 aa8.52□□□□□ -1.05
CLSTN1-204ENST00000464286 ELL2O00472 640 aaPredicted RBP8.51□□□□□ -1.05
CLSTN1-204ENST00000464286 CCP110O43303 1012 aa8.51□□□□□ -1.05
CLSTN1-204ENST00000464286 CCNYL3P0C7X3 344 aa8.51□□□□□ -1.05
CLSTN1-204ENST00000464286 HCLS1P14317 486 aaPredicted RBP8.51□□□□□ -1.05
CLSTN1-204ENST00000464286 ZKSCAN1P17029 563 aaPredicted RBP8.51□□□□□ -1.05
CLSTN1-204ENST00000464286 PSMA5P28066 241 aa8.51□□□□□ -1.05
CLSTN1-204ENST00000464286 VPS53Q5VIR6 699 aa8.51□□□□□ -1.05
CLSTN1-204ENST00000464286 CCDC30Q5VVM6 783 aa8.51□□□□□ -1.05
CLSTN1-204ENST00000464286 DESI1Q6ICB0 168 aa8.51□□□□□ -1.05
CLSTN1-204ENST00000464286 C16orf71Q8IYS4 520 aaPredicted RBP8.51□□□□□ -1.05
CLSTN1-204ENST00000464286 RILPL2Q969X0 211 aa8.51□□□□□ -1.05
CLSTN1-204ENST00000464286 NUP62CLQ9H1M0 184 aa8.51□□□□□ -1.05
CLSTN1-204ENST00000464286 EVA1BQ9NVM1 165 aa8.51□□□□□ -1.05
CLSTN1-204ENST00000464286 SALL3Q9BXA9 1300 aa8.51□□□□□ -1.05
CLSTN1-204ENST00000464286 MYO5BQ9ULV0 1848 aa8.5□□□□□ -1.05
CLSTN1-204ENST00000464286 CTAGE5O15320 804 aa8.5□□□□□ -1.05
CLSTN1-204ENST00000464286 SMPD1P17405 629 aa8.5□□□□□ -1.05
CLSTN1-204ENST00000464286 CBX1P83916 185 aa8.5□□□□□ -1.05
CLSTN1-204ENST00000464286 SLFNL1Q499Z3 407 aa8.5□□□□□ -1.05
CLSTN1-204ENST00000464286 DRC7Q8IY82 874 aa8.5□□□□□ -1.05
CLSTN1-204ENST00000464286 CRIPAKQ8N1N5 446 aa8.5□□□□□ -1.05
CLSTN1-204ENST00000464286 ZNF397Q8NF99 534 aaPredicted RBP8.5□□□□□ -1.05
CLSTN1-204ENST00000464286 MEIS3Q99687 375 aa8.5□□□□□ -1.05
CLSTN1-204ENST00000464286 FUCA2Q9BTY2 467 aa8.5□□□□□ -1.05
CLSTN1-204ENST00000464286 TTC12Q9H892 705 aaPredicted RBP8.5□□□□□ -1.05
CLSTN1-204ENST00000464286 NSFL1CQ9UNZ2 370 aaKnown RBP8.5□□□□□ -1.05
CLSTN1-204ENST00000464286 TTC41PQ6P2S7 1318 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms