RNA–Protein interactions for RNA: ENST00000463925.1

COL5A1-204, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-204ENST00000463925 RTL9Q8NET4 1388 aa22.43■■□□□ 1.18
COL5A1-204ENST00000463925 H7C1D1 291 aa22.43■■□□□ 1.18
COL5A1-204ENST00000463925 TRAF5O00463 557 aa22.43■■□□□ 1.18
COL5A1-204ENST00000463925 UFL1O94874 794 aa22.43■■□□□ 1.18
COL5A1-204ENST00000463925 HIRAP54198 1017 aaPredicted RBP22.43■■□□□ 1.18
COL5A1-204ENST00000463925 ANKRD18AQ8IVF6 992 aa22.43■■□□□ 1.18
COL5A1-204ENST00000463925 MICALL2Q8IY33 904 aa22.43■■□□□ 1.18
COL5A1-204ENST00000463925 CCDC85AQ96PX6 553 aaPredicted RBP22.43■■□□□ 1.18
COL5A1-204ENST00000463925 ANKIB1Q9P2G1 1089 aa22.43■■□□□ 1.18
COL5A1-204ENST00000463925 GGA1Q9UJY5 639 aa22.43■■□□□ 1.18
COL5A1-204ENST00000463925 RPS12P25398 132 aaKnown RBP22.42■■□□□ 1.18
COL5A1-204ENST00000463925 FLIIQ13045 1269 aa22.42■■□□□ 1.18
COL5A1-204ENST00000463925 CWF19L2Q2TBE0 894 aaKnown RBP22.42■■□□□ 1.18
COL5A1-204ENST00000463925 CST9Q5W186 159 aa22.42■■□□□ 1.18
COL5A1-204ENST00000463925 GPR101Q96P66 508 aaPredicted RBP22.42■■□□□ 1.18
COL5A1-204ENST00000463925 CDC5LQ99459 802 aaKnown RBP22.42■■□□□ 1.18
COL5A1-204ENST00000463925 ZC3H12CQ9C0D7 883 aaKnown RBP22.42■■□□□ 1.18
COL5A1-204ENST00000463925 ZBTB12Q9Y330 459 aaPredicted RBP22.42■■□□□ 1.18
COL5A1-204ENST00000463925 THSD7BQ9C0I4 1608 aa22.42■■□□□ 1.18
COL5A1-204ENST00000463925 XDHP47989 1333 aa22.41■■□□□ 1.18
COL5A1-204ENST00000463925 SHTN1A0MZ66 631 aa22.41■■□□□ 1.18
COL5A1-204ENST00000463925 DOK7Q18PE1 504 aa22.41■■□□□ 1.18
COL5A1-204ENST00000463925 TNS4Q8IZW8 715 aa22.41■■□□□ 1.18
COL5A1-204ENST00000463925 TTLL11Q8NHH1 800 aa22.41■■□□□ 1.18
COL5A1-204ENST00000463925 SCN9AQ15858 1988 aa22.41■■□□□ 1.18
COL5A1-204ENST00000463925 WDR33Q9C0J8 1336 aaKnown RBP22.4■■□□□ 1.18
COL5A1-204ENST00000463925 FOXN1O15353 648 aa22.4■■□□□ 1.18
COL5A1-204ENST00000463925 VAMP4O75379 141 aa22.4■■□□□ 1.18
COL5A1-204ENST00000463925 GLIS2Q9BZE0 524 aaPredicted RBP22.4■■□□□ 1.18
COL5A1-204ENST00000463925 TLL2Q9Y6L7 1015 aa22.4■■□□□ 1.18
COL5A1-204ENST00000463925 ZNF609O15014 1411 aa22.4■■□□□ 1.18
COL5A1-204ENST00000463925 H7C1W4 665 aa22.39■■□□□ 1.17
COL5A1-204ENST00000463925 AIDAQ96BJ3 306 aa22.39■■□□□ 1.17
COL5A1-204ENST00000463925 WBP1LQ9NX94 342 aa22.39■■□□□ 1.17
COL5A1-204ENST00000463925 FKBP5Q13451 457 aaPredicted RBP22.38■■□□□ 1.17
COL5A1-204ENST00000463925 CDC37L1Q7L3B6 337 aa22.38■■□□□ 1.17
COL5A1-204ENST00000463925 UBE3BQ7Z3V4 1068 aa22.38■■□□□ 1.17
COL5A1-204ENST00000463925 DNAAF4Q8WXU2 420 aa22.38■■□□□ 1.17
COL5A1-204ENST00000463925 PLA2G12BQ9BX93 195 aa22.38■■□□□ 1.17
COL5A1-204ENST00000463925 GREM2Q9H772 168 aa22.38■■□□□ 1.17
COL5A1-204ENST00000463925 KCNQ5Q9NR82 932 aa22.38■■□□□ 1.17
COL5A1-204ENST00000463925 BSDC1Q9NW68 430 aaPredicted RBP22.38■■□□□ 1.17
COL5A1-204ENST00000463925 SALL2Q9Y467 1007 aaPredicted RBP22.38■■□□□ 1.17
COL5A1-204ENST00000463925 PSME4Q14997 1843 aa22.37■■□□□ 1.17
COL5A1-204ENST00000463925 CELF2O95319 508 aaKnown RBP22.37■■□□□ 1.17
COL5A1-204ENST00000463925 VIL1P09327 827 aaKnown RBP22.37■■□□□ 1.17
COL5A1-204ENST00000463925 ATP2B4P23634 1241 aa22.37■■□□□ 1.17
COL5A1-204ENST00000463925 ECE1P42892 770 aa22.37■■□□□ 1.17
COL5A1-204ENST00000463925 EXOSC9Q06265 439 aaKnown RBP22.37■■□□□ 1.17
COL5A1-204ENST00000463925 GCKRQ14397 625 aa22.37■■□□□ 1.17
COL5A1-204ENST00000463925 SAMD7Q7Z3H4 446 aa22.37■■□□□ 1.17
COL5A1-204ENST00000463925 CAPNS2Q96L46 248 aa22.37■■□□□ 1.17
COL5A1-204ENST00000463925 MYH16Q9H6N6 1097 aa22.37■■□□□ 1.17
COL5A1-204ENST00000463925 G3V3G9 751 aa22.36■■□□□ 1.17
COL5A1-204ENST00000463925 CTCFP49711 727 aaPredicted RBP22.36■■□□□ 1.17
COL5A1-204ENST00000463925 MAP2K1Q02750 393 aaPredicted RBP22.36■■□□□ 1.17
COL5A1-204ENST00000463925 DCAF8Q5TAQ9 597 aa22.36■■□□□ 1.17
COL5A1-204ENST00000463925 LINS1Q8NG48 757 aa22.36■■□□□ 1.17
COL5A1-204ENST00000463925 PRDM10Q9NQV6 1147 aa22.36■■□□□ 1.17
COL5A1-204ENST00000463925 CASP7P55210 303 aa22.35■■□□□ 1.17
COL5A1-204ENST00000463925 SAPCD2Q86UD0 394 aa22.35■■□□□ 1.17
COL5A1-204ENST00000463925 MED23Q9ULK4 1368 aa22.35■■□□□ 1.17
COL5A1-204ENST00000463925 SPEF2Q9C093 1822 aa22.34■■□□□ 1.17
COL5A1-204ENST00000463925 EGFRP00533 1210 aa22.34■■□□□ 1.17
COL5A1-204ENST00000463925 TBC1D10BQ4KMP7 808 aaPredicted RBP22.34■■□□□ 1.17
COL5A1-204ENST00000463925 PAXIP1Q6ZW49 1069 aaPredicted RBP22.34■■□□□ 1.17
COL5A1-204ENST00000463925 HHIPL1Q96JK4 782 aa22.34■■□□□ 1.17
COL5A1-204ENST00000463925 SPINK5Q9NQ38 1064 aaPredicted RBP22.34■■□□□ 1.17
COL5A1-204ENST00000463925 MINPP1Q9UNW1 487 aa22.34■■□□□ 1.17
COL5A1-204ENST00000463925 CYP4F22Q6NT55 531 aa22.33■■□□□ 1.17
COL5A1-204ENST00000463925 AGBL3Q8NEM8 1001 aa22.33■■□□□ 1.17
COL5A1-204ENST00000463925 KIF4BQ2VIQ3 1234 aa22.32■■□□□ 1.16
COL5A1-204ENST00000463925 RSBN1LQ6PCB5 846 aaPredicted RBP22.32■■□□□ 1.16
COL5A1-204ENST00000463925 PODNQ7Z5L7 613 aa22.32■■□□□ 1.16
COL5A1-204ENST00000463925 FAM9BQ8IZU0 186 aa22.32■■□□□ 1.16
COL5A1-204ENST00000463925 CSF1RP07333 972 aa22.31■■□□□ 1.16
COL5A1-204ENST00000463925 IGHMBP2P38935 993 aaKnown RBP22.31■■□□□ 1.16
COL5A1-204ENST00000463925 FAM161AQ3B820 660 aa22.31■■□□□ 1.16
COL5A1-204ENST00000463925 USP48Q86UV5 1035 aa22.31■■□□□ 1.16
COL5A1-204ENST00000463925 ZNF408Q9H9D4 720 aa22.31■■□□□ 1.16
COL5A1-204ENST00000463925 ITGA6P23229 1130 aa22.3■■□□□ 1.16
COL5A1-204ENST00000463925 CCT4P50991 539 aaKnown RBP22.3■■□□□ 1.16
COL5A1-204ENST00000463925 ZNF280AP59817 542 aaPredicted RBP22.3■■□□□ 1.16
COL5A1-204ENST00000463925 KRT26Q7Z3Y9 468 aa22.3■■□□□ 1.16
COL5A1-204ENST00000463925 MAP2K2P36507 400 aa22.29■■□□□ 1.16
COL5A1-204ENST00000463925 RBM26Q5T8P6 1007 aaKnown RBP22.29■■□□□ 1.16
COL5A1-204ENST00000463925 DCPSQ96C86 337 aaKnown RBP22.29■■□□□ 1.16
COL5A1-204ENST00000463925 GMLQ99445 158 aa22.29■■□□□ 1.16
COL5A1-204ENST00000463925 LEMD3Q9Y2U8 911 aa22.29■■□□□ 1.16
COL5A1-204ENST00000463925 USP17L3A6NCW0 530 aa22.28■■□□□ 1.16
COL5A1-204ENST00000463925 USP17L4A6NCW7 530 aa22.28■■□□□ 1.16
COL5A1-204ENST00000463925 WTIPA6NIX2 430 aaPredicted RBP22.28■■□□□ 1.16
COL5A1-204ENST00000463925 HSPA8P11142 646 aaKnown RBP22.28■■□□□ 1.16
COL5A1-204ENST00000463925 GRM1Q13255 1194 aa22.28■■□□□ 1.16
COL5A1-204ENST00000463925 BEND3Q5T5X7 828 aa22.28■■□□□ 1.16
COL5A1-204ENST00000463925 USP17L1Q7RTZ2 530 aa22.28■■□□□ 1.16
COL5A1-204ENST00000463925 ZNF521Q96K83 1311 aa22.28■■□□□ 1.16
COL5A1-204ENST00000463925 POLR2AP24928 1970 aaKnown RBP22.27■■□□□ 1.16
COL5A1-204ENST00000463925 F6X3S4 739 aa22.27■■□□□ 1.16
COL5A1-204ENST00000463925 LBX1P52954 281 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms