RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 DDX10Q13206 875 aaKnown RBP13.31□□□□□ -0.28
TMEM54-203ENST00000463914 NOGQ13253 232 aa13.31□□□□□ -0.28
TMEM54-203ENST00000463914 TBC1D16Q8TBP0 767 aa13.31□□□□□ -0.28
TMEM54-203ENST00000463914 SEC31BQ9NQW1 1179 aa13.31□□□□□ -0.28
TMEM54-203ENST00000463914 HYPKQ9NX55 129 aa13.31□□□□□ -0.28
TMEM54-203ENST00000463914 ADAMTS8Q9UP79 889 aa13.31□□□□□ -0.28
TMEM54-203ENST00000463914 UFL1O94874 794 aa13.3□□□□□ -0.28
TMEM54-203ENST00000463914 RPS12P25398 132 aaKnown RBP13.3□□□□□ -0.28
TMEM54-203ENST00000463914 RPS8P62241 208 aaKnown RBP13.3□□□□□ -0.28
TMEM54-203ENST00000463914 TRIM28Q13263 835 aaKnown RBP13.3□□□□□ -0.28
TMEM54-203ENST00000463914 KIF4BQ2VIQ3 1234 aa13.3□□□□□ -0.28
TMEM54-203ENST00000463914 CFAP44Q96MT7 982 aa13.3□□□□□ -0.28
TMEM54-203ENST00000463914 EYA3Q99504 573 aa13.3□□□□□ -0.28
TMEM54-203ENST00000463914 PHAXQ9H814 394 aaKnown RBP13.3□□□□□ -0.28
TMEM54-203ENST00000463914 GBA2Q9HCG7 927 aaPredicted RBP13.3□□□□□ -0.28
TMEM54-203ENST00000463914 GGA3Q9NZ52 723 aa13.3□□□□□ -0.28
TMEM54-203ENST00000463914 AKAP11Q9UKA4 1901 aa13.29□□□□□ -0.28
TMEM54-203ENST00000463914 FAM155AB1AL88 458 aaPredicted RBP13.29□□□□□ -0.28
TMEM54-203ENST00000463914 GOLGA2Q08379 1002 aa13.29□□□□□ -0.28
TMEM54-203ENST00000463914 DGKZQ13574 1117 aa13.29□□□□□ -0.28
TMEM54-203ENST00000463914 RGMBQ6NW40 437 aa13.29□□□□□ -0.28
TMEM54-203ENST00000463914 RIC3Q7Z5B4 369 aa13.29□□□□□ -0.28
TMEM54-203ENST00000463914 JARID2Q92833 1246 aaPredicted RBP13.29□□□□□ -0.28
TMEM54-203ENST00000463914 CCDC85AQ96PX6 553 aaPredicted RBP13.29□□□□□ -0.28
TMEM54-203ENST00000463914 MYD88Q99836 296 aa13.29□□□□□ -0.28
TMEM54-203ENST00000463914 ZNF646O15015 1829 aaPredicted RBP13.29□□□□□ -0.28
TMEM54-203ENST00000463914 MYH3P11055 1940 aa13.29□□□□□ -0.28
TMEM54-203ENST00000463914 ELL2O00472 640 aaPredicted RBP13.28□□□□□ -0.28
TMEM54-203ENST00000463914 MLLT1Q03111 559 aaPredicted RBP13.28□□□□□ -0.28
TMEM54-203ENST00000463914 ZBTB38Q8NAP3 1195 aaPredicted RBP13.28□□□□□ -0.28
TMEM54-203ENST00000463914 DCPSQ96C86 337 aaKnown RBP13.28□□□□□ -0.28
TMEM54-203ENST00000463914 ZNF609O15014 1411 aa13.28□□□□□ -0.28
TMEM54-203ENST00000463914 VIL1P09327 827 aaKnown RBP13.27□□□□□ -0.29
TMEM54-203ENST00000463914 ZNF853P0CG23 659 aa13.27□□□□□ -0.29
TMEM54-203ENST00000463914 RGS19P49795 217 aa13.27□□□□□ -0.29
TMEM54-203ENST00000463914 C2orf69Q8N8R5 385 aa13.27□□□□□ -0.29
TMEM54-203ENST00000463914 CDCA5Q96FF9 252 aa13.27□□□□□ -0.29
TMEM54-203ENST00000463914 ZC3H12CQ9C0D7 883 aaKnown RBP13.27□□□□□ -0.29
TMEM54-203ENST00000463914 PODXL2Q9NZ53 605 aa13.27□□□□□ -0.29
TMEM54-203ENST00000463914 ANKIB1Q9P2G1 1089 aa13.27□□□□□ -0.29
TMEM54-203ENST00000463914 GGA1Q9UJY5 639 aa13.27□□□□□ -0.29
TMEM54-203ENST00000463914 PAPPA2Q9BXP8 1791 aa13.27□□□□□ -0.29
TMEM54-203ENST00000463914 PCCAP05165 728 aaPredicted RBP13.26□□□□□ -0.29
TMEM54-203ENST00000463914 KIF23Q02241 960 aaPredicted RBP13.26□□□□□ -0.29
TMEM54-203ENST00000463914 SULF1Q8IWU6 871 aa13.26□□□□□ -0.29
TMEM54-203ENST00000463914 G3V3G9 751 aa13.25□□□□□ -0.29
TMEM54-203ENST00000463914 APAF1O14727 1248 aa13.25□□□□□ -0.29
TMEM54-203ENST00000463914 SLC34A2O95436 690 aa13.25□□□□□ -0.29
TMEM54-203ENST00000463914 SLC10A3P09131 477 aa13.25□□□□□ -0.29
TMEM54-203ENST00000463914 ZNF157P51786 506 aaPredicted RBP13.25□□□□□ -0.29
TMEM54-203ENST00000463914 ZNF280AP59817 542 aaPredicted RBP13.25□□□□□ -0.29
TMEM54-203ENST00000463914 CCDC152Q4G0S7 254 aa13.25□□□□□ -0.29
TMEM54-203ENST00000463914 DCAF8Q5TAQ9 597 aa13.25□□□□□ -0.29
TMEM54-203ENST00000463914 IFT57Q9NWB7 429 aa13.25□□□□□ -0.29
TMEM54-203ENST00000463914 PDE8AO60658 829 aa13.24□□□□□ -0.29
TMEM54-203ENST00000463914 ANGEL2Q5VTE6 544 aaKnown RBP13.24□□□□□ -0.29
TMEM54-203ENST00000463914 RSBN1LQ6PCB5 846 aaPredicted RBP13.24□□□□□ -0.29
TMEM54-203ENST00000463914 C8orf58Q8NAV2 365 aa13.24□□□□□ -0.29
TMEM54-203ENST00000463914 CCDC191Q8NCU4 936 aa13.24□□□□□ -0.29
TMEM54-203ENST00000463914 CCDC102AQ96A19 550 aa13.24□□□□□ -0.29
TMEM54-203ENST00000463914 CWC25Q9NXE8 425 aaPredicted RBP13.24□□□□□ -0.29
TMEM54-203ENST00000463914 SCAF8Q9UPN6 1271 aaKnown RBP13.24□□□□□ -0.29
TMEM54-203ENST00000463914 XDHP47989 1333 aa13.23□□□□□ -0.29
TMEM54-203ENST00000463914 WTIPA6NIX2 430 aaPredicted RBP13.23□□□□□ -0.29
TMEM54-203ENST00000463914 TRPA1O75762 1119 aa13.23□□□□□ -0.29
TMEM54-203ENST00000463914 GNAI1P63096 354 aa13.23□□□□□ -0.29
TMEM54-203ENST00000463914 SCARF1Q14162 830 aa13.23□□□□□ -0.29
TMEM54-203ENST00000463914 RASAL3Q86YV0 1011 aa13.23□□□□□ -0.29
TMEM54-203ENST00000463914 ANKRD18AQ8IVF6 992 aa13.23□□□□□ -0.29
TMEM54-203ENST00000463914 AGBL3Q8NEM8 1001 aa13.23□□□□□ -0.29
TMEM54-203ENST00000463914 GMLQ99445 158 aa13.23□□□□□ -0.29
TMEM54-203ENST00000463914 METTL22Q9BUU2 404 aaPredicted RBP13.23□□□□□ -0.29
TMEM54-203ENST00000463914 SAGE1Q9NXZ1 904 aa13.23□□□□□ -0.29
TMEM54-203ENST00000463914 HSP90B1P14625 803 aaKnown RBP13.22□□□□□ -0.29
TMEM54-203ENST00000463914 CTSWP56202 376 aa13.22□□□□□ -0.29
TMEM54-203ENST00000463914 MOB2Q70IA6 237 aa13.22□□□□□ -0.29
TMEM54-203ENST00000463914 TSPYL6Q8N831 410 aa13.22□□□□□ -0.29
TMEM54-203ENST00000463914 PRKRIP1Q9H875 184 aaPredicted RBP13.22□□□□□ -0.29
TMEM54-203ENST00000463914 RNF186Q9NXI6 227 aa13.22□□□□□ -0.29
TMEM54-203ENST00000463914 MAP3K2Q9Y2U5 619 aa13.22□□□□□ -0.29
TMEM54-203ENST00000463914 PDE4DIPQ5VU43 2346 aa13.21□□□□□ -0.29
TMEM54-203ENST00000463914 IGKV5-2P06315 115 aa13.21□□□□□ -0.29
TMEM54-203ENST00000463914 USP17L8P0C7I0 530 aa13.21□□□□□ -0.29
TMEM54-203ENST00000463914 ATP2B4P23634 1241 aa13.21□□□□□ -0.29
TMEM54-203ENST00000463914 CSRNP1Q96S65 589 aa13.21□□□□□ -0.29
TMEM54-203ENST00000463914 MXD3Q9BW11 206 aa13.21□□□□□ -0.29
TMEM54-203ENST00000463914 MYOZ2Q9NPC6 264 aa13.21□□□□□ -0.29
TMEM54-203ENST00000463914 MED23Q9ULK4 1368 aa13.2□□□□□ -0.3
TMEM54-203ENST00000463914 DDX58O95786 925 aaKnown RBP13.2□□□□□ -0.3
TMEM54-203ENST00000463914 SOX10P56693 466 aa13.2□□□□□ -0.3
TMEM54-203ENST00000463914 CALD1Q05682 793 aaKnown RBP13.2□□□□□ -0.3
TMEM54-203ENST00000463914 CCDC30Q5VVM6 783 aa13.2□□□□□ -0.3
TMEM54-203ENST00000463914 CDC5LQ99459 802 aaKnown RBP13.2□□□□□ -0.3
TMEM54-203ENST00000463914 GREM2Q9H772 168 aa13.2□□□□□ -0.3
TMEM54-203ENST00000463914 A0A1B0GUL6 1792 aa13.2□□□□□ -0.3
TMEM54-203ENST00000463914 PITPNM2Q9BZ72 1349 aa13.19□□□□□ -0.3
TMEM54-203ENST00000463914 USP17L3A6NCW0 530 aa13.19□□□□□ -0.3
TMEM54-203ENST00000463914 USP17L4A6NCW7 530 aa13.19□□□□□ -0.3
TMEM54-203ENST00000463914 CWF19L2Q2TBE0 894 aaKnown RBP13.19□□□□□ -0.3
TMEM54-203ENST00000463914 PRAMEF18Q5VWM3 479 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms