RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 IQCA1LA6NCM1 817 aa16.46■□□□□ 0.23
R3HDM1-213ENST00000463230 TOMM70O94826 608 aa16.46■□□□□ 0.23
R3HDM1-213ENST00000463230 ATP2B4P23634 1241 aa16.46■□□□□ 0.23
R3HDM1-213ENST00000463230 AOC3Q16853 763 aa16.46■□□□□ 0.23
R3HDM1-213ENST00000463230 C16orf71Q8IYS4 520 aaPredicted RBP16.46■□□□□ 0.23
R3HDM1-213ENST00000463230 RBM46Q8TBY0 533 aaKnown RBP16.46■□□□□ 0.23
R3HDM1-213ENST00000463230 GGA1Q9UJY5 639 aa16.46■□□□□ 0.23
R3HDM1-213ENST00000463230 ZNF541Q9H0D2 1346 aa16.45■□□□□ 0.22
R3HDM1-213ENST00000463230 SLC51AQ86UW1 340 aa16.45■□□□□ 0.22
R3HDM1-213ENST00000463230 TBC1D16Q8TBP0 767 aa16.45■□□□□ 0.22
R3HDM1-213ENST00000463230 ANKRD2Q9GZV1 360 aa16.45■□□□□ 0.22
R3HDM1-213ENST00000463230 RRAGCQ9HB90 399 aa16.45■□□□□ 0.22
R3HDM1-213ENST00000463230 WASHC4Q2M389 1173 aa16.45■□□□□ 0.22
R3HDM1-213ENST00000463230 RABL6Q3YEC7 729 aaPredicted RBP16.45■□□□□ 0.22
R3HDM1-213ENST00000463230 LMBR1LQ6UX01 489 aa16.45■□□□□ 0.22
R3HDM1-213ENST00000463230 MPHOSPH8Q99549 860 aa16.45■□□□□ 0.22
R3HDM1-213ENST00000463230 USP44Q9H0E7 712 aa16.45■□□□□ 0.22
R3HDM1-213ENST00000463230 ANKIB1Q9P2G1 1089 aa16.45■□□□□ 0.22
R3HDM1-213ENST00000463230 C6orf229H3BNL8 230 aa16.44■□□□□ 0.22
R3HDM1-213ENST00000463230 NBPF7P0C2Y1 421 aaPredicted RBP16.44■□□□□ 0.22
R3HDM1-213ENST00000463230 CCDC57Q2TAC2 916 aa16.44■□□□□ 0.22
R3HDM1-213ENST00000463230 INTS3Q68E01 1043 aaKnown RBP16.44■□□□□ 0.22
R3HDM1-213ENST00000463230 SUCLG2Q96I99 432 aa16.44■□□□□ 0.22
R3HDM1-213ENST00000463230 POLLQ9UGP5 575 aa16.44■□□□□ 0.22
R3HDM1-213ENST00000463230 MINPP1Q9UNW1 487 aa16.44■□□□□ 0.22
R3HDM1-213ENST00000463230 DDNO94850 711 aaPredicted RBP16.43■□□□□ 0.22
R3HDM1-213ENST00000463230 UFL1O94874 794 aa16.43■□□□□ 0.22
R3HDM1-213ENST00000463230 EPHA10Q5JZY3 1008 aa16.43■□□□□ 0.22
R3HDM1-213ENST00000463230 ATF7IPQ6VMQ6 1270 aa16.43■□□□□ 0.22
R3HDM1-213ENST00000463230 LEMD3Q9Y2U8 911 aa16.43■□□□□ 0.22
R3HDM1-213ENST00000463230 TNIP1Q15025 636 aa16.42■□□□□ 0.22
R3HDM1-213ENST00000463230 KAZALD1Q96I82 304 aa16.42■□□□□ 0.22
R3HDM1-213ENST00000463230 FSTL1Q12841 308 aa16.42■□□□□ 0.22
R3HDM1-213ENST00000463230 ZKSCAN2Q63HK3 967 aa16.42■□□□□ 0.22
R3HDM1-213ENST00000463230 ZC3H12CQ9C0D7 883 aaKnown RBP16.42■□□□□ 0.22
R3HDM1-213ENST00000463230 CHMP3Q9Y3E7 222 aa16.42■□□□□ 0.22
R3HDM1-213ENST00000463230 MED23Q9ULK4 1368 aa16.41■□□□□ 0.22
R3HDM1-213ENST00000463230 POTECB2RU33 542 aa16.41■□□□□ 0.22
R3HDM1-213ENST00000463230 A0A1B0GUL6 1792 aa16.41■□□□□ 0.22
R3HDM1-213ENST00000463230 BCAR3O75815 825 aa16.41■□□□□ 0.22
R3HDM1-213ENST00000463230 TAF7LQ5H9L4 462 aa16.41■□□□□ 0.22
R3HDM1-213ENST00000463230 BICC1Q9H694 974 aaKnown RBP16.41■□□□□ 0.22
R3HDM1-213ENST00000463230 UBTFL1P0CB47 393 aaPredicted RBP16.4■□□□□ 0.22
R3HDM1-213ENST00000463230 TRIM27P14373 513 aa16.4■□□□□ 0.22
R3HDM1-213ENST00000463230 CIAPIN1Q6FI81 312 aa16.4■□□□□ 0.22
R3HDM1-213ENST00000463230 ANKRD44Q8N8A2 993 aa16.4■□□□□ 0.22
R3HDM1-213ENST00000463230 HACL1Q9UJ83 578 aa16.4■□□□□ 0.22
R3HDM1-213ENST00000463230 GNAI3P08754 354 aa16.39■□□□□ 0.22
R3HDM1-213ENST00000463230 CXCL9Q07325 125 aa16.39■□□□□ 0.22
R3HDM1-213ENST00000463230 SMC1BQ8NDV3 1235 aa16.39■□□□□ 0.22
R3HDM1-213ENST00000463230 PSME4Q14997 1843 aa16.39■□□□□ 0.21
R3HDM1-213ENST00000463230 ZNF609O15014 1411 aa16.39■□□□□ 0.21
R3HDM1-213ENST00000463230 LMOD1P29536 600 aaPredicted RBP16.38■□□□□ 0.21
R3HDM1-213ENST00000463230 C15orf52Q6ZUT6 534 aaKnown RBP16.38■□□□□ 0.21
R3HDM1-213ENST00000463230 FRAT1Q92837 279 aaPredicted RBP16.38■□□□□ 0.21
R3HDM1-213ENST00000463230 TAF1DQ9H5J8 278 aaPredicted RBP16.38■□□□□ 0.21
R3HDM1-213ENST00000463230 ECE2O60344 883 aa16.38■□□□□ 0.21
R3HDM1-213ENST00000463230 CHRNDQ07001 517 aa16.38■□□□□ 0.21
R3HDM1-213ENST00000463230 LDHAL6AQ6ZMR3 332 aa16.38■□□□□ 0.21
R3HDM1-213ENST00000463230 PNMA8AQ86V59 439 aaPredicted RBP16.38■□□□□ 0.21
R3HDM1-213ENST00000463230 GJA3Q9Y6H8 435 aa16.38■□□□□ 0.21
R3HDM1-213ENST00000463230 G3V3G9 751 aa16.37■□□□□ 0.21
R3HDM1-213ENST00000463230 DCAF8Q5TAQ9 597 aa16.37■□□□□ 0.21
R3HDM1-213ENST00000463230 ZNF804BA4D1E1 1349 aa16.37■□□□□ 0.21
R3HDM1-213ENST00000463230 YDJCA8MPS7 323 aa16.37■□□□□ 0.21
R3HDM1-213ENST00000463230 RIMBP2O15034 1052 aa16.37■□□□□ 0.21
R3HDM1-213ENST00000463230 RPS12P25398 132 aaKnown RBP16.37■□□□□ 0.21
R3HDM1-213ENST00000463230 PODNQ7Z5L7 613 aa16.37■□□□□ 0.21
R3HDM1-213ENST00000463230 CNNM1Q9NRU3 951 aa16.37■□□□□ 0.21
R3HDM1-213ENST00000463230 FBXO3Q9UK99 471 aa16.37■□□□□ 0.21
R3HDM1-213ENST00000463230 ADAMTSL1Q8N6G6 1762 aa16.36■□□□□ 0.21
R3HDM1-213ENST00000463230 MROH5Q6ZUA9 1318 aa16.36■□□□□ 0.21
R3HDM1-213ENST00000463230 MS4A1P11836 297 aa16.36■□□□□ 0.21
R3HDM1-213ENST00000463230 LDHDQ86WU2 507 aa16.36■□□□□ 0.21
R3HDM1-213ENST00000463230 COA1Q9GZY4 146 aa16.36■□□□□ 0.21
R3HDM1-213ENST00000463230 EPHX2P34913 555 aa16.35■□□□□ 0.21
R3HDM1-213ENST00000463230 KCNJ4P48050 445 aa16.35■□□□□ 0.21
R3HDM1-213ENST00000463230 SCNN1DP51172 638 aa16.35■□□□□ 0.21
R3HDM1-213ENST00000463230 DPF2Q92785 391 aa16.35■□□□□ 0.21
R3HDM1-213ENST00000463230 DBNDD1Q9H9R9 158 aa16.35■□□□□ 0.21
R3HDM1-213ENST00000463230 GPRC5DQ9NZD1 345 aa16.35■□□□□ 0.21
R3HDM1-213ENST00000463230 RAD17O75943 681 aa16.34■□□□□ 0.21
R3HDM1-213ENST00000463230 DOK7Q18PE1 504 aa16.34■□□□□ 0.21
R3HDM1-213ENST00000463230 CHADLQ6NUI6 762 aa16.34■□□□□ 0.21
R3HDM1-213ENST00000463230 USP50Q70EL3 339 aaPredicted RBP16.34■□□□□ 0.21
R3HDM1-213ENST00000463230 FTSJ3Q8IY81 847 aaKnown RBP16.34■□□□□ 0.21
R3HDM1-213ENST00000463230 DZIP1LQ8IYY4 767 aaKnown RBP16.34■□□□□ 0.21
R3HDM1-213ENST00000463230 ZNF594Q96JF6 807 aaPredicted RBP16.34■□□□□ 0.21
R3HDM1-213ENST00000463230 GPR101Q96P66 508 aaPredicted RBP16.34■□□□□ 0.21
R3HDM1-213ENST00000463230 MEIS3Q99687 375 aa16.34■□□□□ 0.21
R3HDM1-213ENST00000463230 RIPOR2Q9Y4F9 1068 aa16.34■□□□□ 0.21
R3HDM1-213ENST00000463230 SCN9AQ15858 1988 aa16.33■□□□□ 0.21
R3HDM1-213ENST00000463230 VIL1P09327 827 aaKnown RBP16.33■□□□□ 0.2
R3HDM1-213ENST00000463230 HSPA6P17066 643 aa16.33■□□□□ 0.2
R3HDM1-213ENST00000463230 GMPSP49915 693 aaPredicted RBP16.33■□□□□ 0.2
R3HDM1-213ENST00000463230 UBE4AQ14139 1066 aa16.33■□□□□ 0.2
R3HDM1-213ENST00000463230 ADARB2Q9NS39 739 aaKnown RBP16.33■□□□□ 0.2
R3HDM1-213ENST00000463230 IRS2Q9Y4H2 1338 aa16.33■□□□□ 0.2
R3HDM1-213ENST00000463230 PSMD14O00487 310 aa16.33■□□□□ 0.2
R3HDM1-213ENST00000463230 MMP14P50281 582 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms