RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 ADAMTSL1Q8N6G6 1762 aa10.93□□□□□ -0.66
TMEM254-208ENST00000463209 SCN9AQ15858 1988 aa10.92□□□□□ -0.66
TMEM254-208ENST00000463209 SHTN1A0MZ66 631 aa10.92□□□□□ -0.66
TMEM254-208ENST00000463209 HSPA6P17066 643 aa10.92□□□□□ -0.66
TMEM254-208ENST00000463209 KLRK1P26718 216 aa10.92□□□□□ -0.66
TMEM254-208ENST00000463209 HOXD11P31277 338 aaPredicted RBP10.92□□□□□ -0.66
TMEM254-208ENST00000463209 EPS15P42566 896 aa10.92□□□□□ -0.66
TMEM254-208ENST00000463209 CXCL9Q07325 125 aa10.92□□□□□ -0.66
TMEM254-208ENST00000463209 WASHC4Q2M389 1173 aa10.92□□□□□ -0.66
TMEM254-208ENST00000463209 GRIPAP1Q4V328 841 aa10.92□□□□□ -0.66
TMEM254-208ENST00000463209 LMBR1LQ6UX01 489 aa10.92□□□□□ -0.66
TMEM254-208ENST00000463209 TMC4Q7Z404 712 aa10.92□□□□□ -0.66
TMEM254-208ENST00000463209 GPC2Q8N158 579 aa10.92□□□□□ -0.66
TMEM254-208ENST00000463209 ZNF594Q96JF6 807 aaPredicted RBP10.92□□□□□ -0.66
TMEM254-208ENST00000463209 L3MBTL3Q96JM7 780 aaPredicted RBP10.92□□□□□ -0.66
TMEM254-208ENST00000463209 PLA2G12BQ9BX93 195 aa10.92□□□□□ -0.66
TMEM254-208ENST00000463209 TAF1DQ9H5J8 278 aaPredicted RBP10.92□□□□□ -0.66
TMEM254-208ENST00000463209 ZNRF3Q9ULT6 936 aa10.92□□□□□ -0.66
TMEM254-208ENST00000463209 RTL9Q8NET4 1388 aa10.91□□□□□ -0.66
TMEM254-208ENST00000463209 PTPRCP08575 1304 aa10.91□□□□□ -0.66
TMEM254-208ENST00000463209 ECE2O60344 883 aa10.91□□□□□ -0.66
TMEM254-208ENST00000463209 ALDH1L1O75891 902 aa10.91□□□□□ -0.66
TMEM254-208ENST00000463209 EPHX2P34913 555 aa10.91□□□□□ -0.66
TMEM254-208ENST00000463209 GMPSP49915 693 aaPredicted RBP10.91□□□□□ -0.66
TMEM254-208ENST00000463209 SCNN1DP51172 638 aa10.91□□□□□ -0.66
TMEM254-208ENST00000463209 RARSP54136 660 aaKnown RBP10.91□□□□□ -0.66
TMEM254-208ENST00000463209 ALDH1L2Q3SY69 923 aa10.91□□□□□ -0.66
TMEM254-208ENST00000463209 HELBQ8NG08 1087 aaPredicted RBP10.91□□□□□ -0.66
TMEM254-208ENST00000463209 KAZALD1Q96I82 304 aa10.91□□□□□ -0.66
TMEM254-208ENST00000463209 CDC5LQ99459 802 aaKnown RBP10.91□□□□□ -0.66
TMEM254-208ENST00000463209 HACL1Q9UJ83 578 aa10.91□□□□□ -0.66
TMEM254-208ENST00000463209 GGA1Q9UJY5 639 aa10.91□□□□□ -0.66
TMEM254-208ENST00000463209 MINPP1Q9UNW1 487 aa10.91□□□□□ -0.66
TMEM254-208ENST00000463209 XDHP47989 1333 aa10.9□□□□□ -0.66
TMEM254-208ENST00000463209 SNAP23O00161 211 aa10.9□□□□□ -0.66
TMEM254-208ENST00000463209 BCAR3O75815 825 aa10.9□□□□□ -0.66
TMEM254-208ENST00000463209 CSF1RP07333 972 aa10.9□□□□□ -0.66
TMEM254-208ENST00000463209 IGHMBP2P38935 993 aaKnown RBP10.9□□□□□ -0.66
TMEM254-208ENST00000463209 SMC1BQ8NDV3 1235 aa10.9□□□□□ -0.66
TMEM254-208ENST00000463209 ZBTB12Q9Y330 459 aaPredicted RBP10.9□□□□□ -0.66
TMEM254-208ENST00000463209 ZNF646O15015 1829 aaPredicted RBP10.89□□□□□ -0.67
TMEM254-208ENST00000463209 ANKRD18BA2A2Z9 1011 aa10.89□□□□□ -0.67
TMEM254-208ENST00000463209 IQCA1LA6NCM1 817 aa10.89□□□□□ -0.67
TMEM254-208ENST00000463209 PSMD14O00487 310 aa10.89□□□□□ -0.67
TMEM254-208ENST00000463209 TAF5LO75529 589 aa10.89□□□□□ -0.67
TMEM254-208ENST00000463209 CIAPIN1Q6FI81 312 aa10.89□□□□□ -0.67
TMEM254-208ENST00000463209 TXNRD3Q86VQ6 643 aa10.89□□□□□ -0.67
TMEM254-208ENST00000463209 ANKRD44Q8N8A2 993 aa10.89□□□□□ -0.67
TMEM254-208ENST00000463209 FRAT1Q92837 279 aaPredicted RBP10.89□□□□□ -0.67
TMEM254-208ENST00000463209 BICC1Q9H694 974 aaKnown RBP10.89□□□□□ -0.67
TMEM254-208ENST00000463209 BSDC1Q9NW68 430 aaPredicted RBP10.89□□□□□ -0.67
TMEM254-208ENST00000463209 PODXL2Q9NZ53 605 aa10.89□□□□□ -0.67
TMEM254-208ENST00000463209 CLEC11AQ9Y240 323 aa10.89□□□□□ -0.67
TMEM254-208ENST00000463209 PLIN1O60240 522 aa10.88□□□□□ -0.67
TMEM254-208ENST00000463209 LMOD1P29536 600 aaPredicted RBP10.88□□□□□ -0.67
TMEM254-208ENST00000463209 FSTL1Q12841 308 aa10.88□□□□□ -0.67
TMEM254-208ENST00000463209 IFIT5Q13325 482 aaKnown RBP10.88□□□□□ -0.67
TMEM254-208ENST00000463209 MAP1SQ66K74 1059 aaPredicted RBP10.88□□□□□ -0.67
TMEM254-208ENST00000463209 CHADLQ6NUI6 762 aa10.88□□□□□ -0.67
TMEM254-208ENST00000463209 KLHDC4Q8TBB5 520 aa10.88□□□□□ -0.67
TMEM254-208ENST00000463209 EYA3Q99504 573 aa10.88□□□□□ -0.67
TMEM254-208ENST00000463209 MPHOSPH8Q99549 860 aa10.88□□□□□ -0.67
TMEM254-208ENST00000463209 MXD3Q9BW11 206 aa10.88□□□□□ -0.67
TMEM254-208ENST00000463209 PUS3Q9BZE2 481 aaKnown RBP10.88□□□□□ -0.67
TMEM254-208ENST00000463209 ZC3H12CQ9C0D7 883 aaKnown RBP10.88□□□□□ -0.67
TMEM254-208ENST00000463209 USP44Q9H0E7 712 aa10.88□□□□□ -0.67
TMEM254-208ENST00000463209 PSME4Q14997 1843 aa10.87□□□□□ -0.67
TMEM254-208ENST00000463209 G3V3G9 751 aa10.87□□□□□ -0.67
TMEM254-208ENST00000463209 ATP2B4P23634 1241 aa10.87□□□□□ -0.67
TMEM254-208ENST00000463209 CCT4P50991 539 aaKnown RBP10.87□□□□□ -0.67
TMEM254-208ENST00000463209 FMR1Q06787 632 aaKnown RBP eCLIP10.87□□□□□ -0.67
TMEM254-208ENST00000463209 CHRNDQ07001 517 aa10.87□□□□□ -0.67
TMEM254-208ENST00000463209 TAF7LQ5H9L4 462 aa10.87□□□□□ -0.67
TMEM254-208ENST00000463209 DCAF8Q5TAQ9 597 aa10.87□□□□□ -0.67
TMEM254-208ENST00000463209 FBXW7Q969H0 707 aa10.87□□□□□ -0.67
TMEM254-208ENST00000463209 CLUAP1Q96AJ1 413 aa10.87□□□□□ -0.67
TMEM254-208ENST00000463209 VPS33BQ9H267 617 aa10.87□□□□□ -0.67
TMEM254-208ENST00000463209 GPRC5DQ9NZD1 345 aa10.87□□□□□ -0.67
TMEM254-208ENST00000463209 UTYO14607 1347 aa10.86□□□□□ -0.67
TMEM254-208ENST00000463209 ZBED9Q6R2W3 1325 aa10.86□□□□□ -0.67
TMEM254-208ENST00000463209 EGFRP00533 1210 aa10.86□□□□□ -0.67
TMEM254-208ENST00000463209 CT47B1P0C2W7 299 aaPredicted RBP10.86□□□□□ -0.67
TMEM254-208ENST00000463209 KCNJ4P48050 445 aa10.86□□□□□ -0.67
TMEM254-208ENST00000463209 CCDC57Q2TAC2 916 aa10.86□□□□□ -0.67
TMEM254-208ENST00000463209 LDHDQ86WU2 507 aa10.86□□□□□ -0.67
TMEM254-208ENST00000463209 TRPM4Q8TD43 1214 aa10.86□□□□□ -0.67
TMEM254-208ENST00000463209 API5Q9BZZ5 524 aaKnown RBP10.86□□□□□ -0.67
TMEM254-208ENST00000463209 MED23Q9ULK4 1368 aa10.86□□□□□ -0.67
TMEM254-208ENST00000463209 ZNF804BA4D1E1 1349 aa10.85□□□□□ -0.67
TMEM254-208ENST00000463209 APLP1P51693 650 aa10.85□□□□□ -0.67
TMEM254-208ENST00000463209 TNIP1Q15025 636 aa10.85□□□□□ -0.67
TMEM254-208ENST00000463209 RBM26Q5T8P6 1007 aaKnown RBP10.85□□□□□ -0.67
TMEM254-208ENST00000463209 DLK2Q6UY11 383 aa10.85□□□□□ -0.67
TMEM254-208ENST00000463209 SAMD7Q7Z3H4 446 aa10.85□□□□□ -0.67
TMEM254-208ENST00000463209 MICALL2Q8IY33 904 aa10.85□□□□□ -0.67
TMEM254-208ENST00000463209 MEIS3Q99687 375 aa10.85□□□□□ -0.67
TMEM254-208ENST00000463209 CNNM1Q9NRU3 951 aa10.85□□□□□ -0.67
TMEM254-208ENST00000463209 JAG2Q9Y219 1238 aa10.85□□□□□ -0.67
TMEM254-208ENST00000463209 ASTN2O75129 1339 aaPredicted RBP10.84□□□□□ -0.67
TMEM254-208ENST00000463209 KIF16BQ96L93 1317 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms