RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 PPIP5K2O43314 1243 aa20.91■□□□□ 0.94
HLA-DPA1-245ENST00000463066 GRIPAP1Q4V328 841 aa20.91■□□□□ 0.94
HLA-DPA1-245ENST00000463066 LARGE2Q8N3Y3 721 aa20.91■□□□□ 0.94
HLA-DPA1-245ENST00000463066 SPEF2Q9C093 1822 aa20.9■□□□□ 0.94
HLA-DPA1-245ENST00000463066 RIMBP2O15034 1052 aa20.9■□□□□ 0.94
HLA-DPA1-245ENST00000463066 UFL1O94874 794 aa20.9■□□□□ 0.94
HLA-DPA1-245ENST00000463066 TAF7LQ5H9L4 462 aa20.9■□□□□ 0.94
HLA-DPA1-245ENST00000463066 HELBQ8NG08 1087 aaPredicted RBP20.9■□□□□ 0.94
HLA-DPA1-245ENST00000463066 MPHOSPH8Q99549 860 aa20.9■□□□□ 0.94
HLA-DPA1-245ENST00000463066 ANKIB1Q9P2G1 1089 aa20.9■□□□□ 0.94
HLA-DPA1-245ENST00000463066 ZNF541Q9H0D2 1346 aa20.89■□□□□ 0.93
HLA-DPA1-245ENST00000463066 SNAP23O00161 211 aa20.89■□□□□ 0.93
HLA-DPA1-245ENST00000463066 GNAI3P08754 354 aa20.89■□□□□ 0.93
HLA-DPA1-245ENST00000463066 RFX5P48382 616 aaPredicted RBP20.89■□□□□ 0.93
HLA-DPA1-245ENST00000463066 SUPT20HQ8NEM7 779 aa20.89■□□□□ 0.93
HLA-DPA1-245ENST00000463066 C1orf115Q9H7X2 142 aa20.89■□□□□ 0.93
HLA-DPA1-245ENST00000463066 PODXL2Q9NZ53 605 aa20.89■□□□□ 0.93
HLA-DPA1-245ENST00000463066 CCDC88AQ3V6T2 1871 aa20.89■□□□□ 0.93
HLA-DPA1-245ENST00000463066 LTBP1Q14766 1721 aa20.89■□□□□ 0.93
HLA-DPA1-245ENST00000463066 XDHP47989 1333 aa20.88■□□□□ 0.93
HLA-DPA1-245ENST00000463066 TIAM2Q8IVF5 1701 aa20.88■□□□□ 0.93
HLA-DPA1-245ENST00000463066 CHRNDQ07001 517 aa20.88■□□□□ 0.93
HLA-DPA1-245ENST00000463066 GGA1Q9UJY5 639 aa20.88■□□□□ 0.93
HLA-DPA1-245ENST00000463066 COG6Q9Y2V7 657 aa20.88■□□□□ 0.93
HLA-DPA1-245ENST00000463066 ZBTB7BO15156 539 aaPredicted RBP20.87■□□□□ 0.93
HLA-DPA1-245ENST00000463066 TAF5LO75529 589 aa20.87■□□□□ 0.93
HLA-DPA1-245ENST00000463066 KIAA2012Q0VF49 1180 aa20.87■□□□□ 0.93
HLA-DPA1-245ENST00000463066 LRRC24Q50LG9 513 aa20.87■□□□□ 0.93
HLA-DPA1-245ENST00000463066 LDHAL6AQ6ZMR3 332 aa20.87■□□□□ 0.93
HLA-DPA1-245ENST00000463066 KLRK1P26718 216 aa20.86■□□□□ 0.93
HLA-DPA1-245ENST00000463066 NMRK2Q9NPI5 230 aa20.86■□□□□ 0.93
HLA-DPA1-245ENST00000463066 CNNM1Q9NRU3 951 aa20.86■□□□□ 0.93
HLA-DPA1-245ENST00000463066 DDNO94850 711 aaPredicted RBP20.85■□□□□ 0.93
HLA-DPA1-245ENST00000463066 GNAI2P04899 355 aa20.85■□□□□ 0.93
HLA-DPA1-245ENST00000463066 ATP2B4P23634 1241 aa20.85■□□□□ 0.93
HLA-DPA1-245ENST00000463066 DOK7Q18PE1 504 aa20.85■□□□□ 0.93
HLA-DPA1-245ENST00000463066 WASHC4Q2M389 1173 aa20.85■□□□□ 0.93
HLA-DPA1-245ENST00000463066 NIM1KQ8IY84 436 aa20.85■□□□□ 0.93
HLA-DPA1-245ENST00000463066 JDP2Q8WYK2 163 aa20.85■□□□□ 0.93
HLA-DPA1-245ENST00000463066 PA2G4Q9UQ80 394 aaKnown RBP20.85■□□□□ 0.93
HLA-DPA1-245ENST00000463066 ZC3H4Q9UPT8 1303 aaKnown RBP20.84■□□□□ 0.93
HLA-DPA1-245ENST00000463066 FZD9O00144 591 aa20.84■□□□□ 0.93
HLA-DPA1-245ENST00000463066 PTPN12Q05209 780 aaKnown RBP20.84■□□□□ 0.93
HLA-DPA1-245ENST00000463066 TXNRD3Q86VQ6 643 aa20.84■□□□□ 0.93
HLA-DPA1-245ENST00000463066 DBNDD1Q9H9R9 158 aa20.84■□□□□ 0.93
HLA-DPA1-245ENST00000463066 DICER1Q9UPY3 1922 aaKnown RBP20.83■□□□□ 0.93
HLA-DPA1-245ENST00000463066 GLTPD2A6NH11 291 aa20.83■□□□□ 0.93
HLA-DPA1-245ENST00000463066 YDJCA8MPS7 323 aa20.83■□□□□ 0.93
HLA-DPA1-245ENST00000463066 MVPQ14764 893 aaKnown RBP20.83■□□□□ 0.93
HLA-DPA1-245ENST00000463066 ANKRD2Q9GZV1 360 aa20.83■□□□□ 0.93
HLA-DPA1-245ENST00000463066 GPBP1L1Q9HC44 474 aaPredicted RBP20.83■□□□□ 0.93
HLA-DPA1-245ENST00000463066 RIPOR2Q9Y4F9 1068 aa20.83■□□□□ 0.93
HLA-DPA1-245ENST00000463066 PNMA6EA0A0J9YXQ4 647 aa20.82■□□□□ 0.92
HLA-DPA1-245ENST00000463066 MS4A1P11836 297 aa20.82■□□□□ 0.92
HLA-DPA1-245ENST00000463066 EYA3Q99504 573 aa20.82■□□□□ 0.92
HLA-DPA1-245ENST00000463066 ZC3H12CQ9C0D7 883 aaKnown RBP20.82■□□□□ 0.92
HLA-DPA1-245ENST00000463066 SIL1Q9H173 461 aa20.82■□□□□ 0.92
HLA-DPA1-245ENST00000463066 VPS33BQ9H267 617 aa20.82■□□□□ 0.92
HLA-DPA1-245ENST00000463066 KCNQ5Q9NR82 932 aa20.82■□□□□ 0.92
HLA-DPA1-245ENST00000463066 HDAC5Q9UQL6 1122 aa20.82■□□□□ 0.92
HLA-DPA1-245ENST00000463066 ZNF804BA4D1E1 1349 aa20.81■□□□□ 0.92
HLA-DPA1-245ENST00000463066 SRGAP3O43295 1099 aa20.81■□□□□ 0.92
HLA-DPA1-245ENST00000463066 RRP1P56182 461 aaKnown RBP20.81■□□□□ 0.92
HLA-DPA1-245ENST00000463066 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.81■□□□□ 0.92
HLA-DPA1-245ENST00000463066 ZNRF3Q9ULT6 936 aa20.81■□□□□ 0.92
HLA-DPA1-245ENST00000463066 EYA2O00167 538 aa20.8■□□□□ 0.92
HLA-DPA1-245ENST00000463066 ECE2O60344 883 aa20.8■□□□□ 0.92
HLA-DPA1-245ENST00000463066 RAD17O75943 681 aa20.8■□□□□ 0.92
HLA-DPA1-245ENST00000463066 CXCL9Q07325 125 aa20.8■□□□□ 0.92
HLA-DPA1-245ENST00000463066 MTX1Q13505 466 aa20.8■□□□□ 0.92
HLA-DPA1-245ENST00000463066 PDE3AQ14432 1141 aa20.8■□□□□ 0.92
HLA-DPA1-245ENST00000463066 ATG9AQ7Z3C6 839 aa20.8■□□□□ 0.92
HLA-DPA1-245ENST00000463066 RRAGCQ9HB90 399 aa20.8■□□□□ 0.92
HLA-DPA1-245ENST00000463066 LEMD3Q9Y2U8 911 aa20.8■□□□□ 0.92
HLA-DPA1-245ENST00000463066 GJA3Q9Y6H8 435 aa20.8■□□□□ 0.92
HLA-DPA1-245ENST00000463066 IRS2Q9Y4H2 1338 aa20.79■□□□□ 0.92
HLA-DPA1-245ENST00000463066 POTECB2RU33 542 aa20.79■□□□□ 0.92
HLA-DPA1-245ENST00000463066 KCNJ4P48050 445 aa20.79■□□□□ 0.92
HLA-DPA1-245ENST00000463066 EIF6P56537 245 aaKnown RBP20.79■□□□□ 0.92
HLA-DPA1-245ENST00000463066 KDM2BQ8NHM5 1336 aa20.78■□□□□ 0.92
HLA-DPA1-245ENST00000463066 MED23Q9ULK4 1368 aa20.78■□□□□ 0.92
HLA-DPA1-245ENST00000463066 KIF3CO14782 793 aa20.78■□□□□ 0.92
HLA-DPA1-245ENST00000463066 METTL24Q5JXM2 366 aa20.78■□□□□ 0.92
HLA-DPA1-245ENST00000463066 DPY19L2Q6NUT2 758 aa20.78■□□□□ 0.92
HLA-DPA1-245ENST00000463066 VGLL2Q8N8G2 317 aa20.77■□□□□ 0.92
HLA-DPA1-245ENST00000463066 COPRSQ9NQ92 184 aa20.77■□□□□ 0.92
HLA-DPA1-245ENST00000463066 DDX19BQ9UMR2 479 aa20.77■□□□□ 0.92
HLA-DPA1-245ENST00000463066 A0A1B0GUL6 1792 aa20.77■□□□□ 0.91
HLA-DPA1-245ENST00000463066 MROH5Q6ZUA9 1318 aa20.77■□□□□ 0.91
HLA-DPA1-245ENST00000463066 ATP8B2P98198 1209 aa20.76■□□□□ 0.91
HLA-DPA1-245ENST00000463066 ZBTB40Q9NUA8 1239 aa20.76■□□□□ 0.91
HLA-DPA1-245ENST00000463066 G3V3G9 751 aa20.75■□□□□ 0.91
HLA-DPA1-245ENST00000463066 POLA2Q14181 598 aa20.75■□□□□ 0.91
HLA-DPA1-245ENST00000463066 DCAF8Q5TAQ9 597 aa20.75■□□□□ 0.91
HLA-DPA1-245ENST00000463066 CIAPIN1Q6FI81 312 aa20.75■□□□□ 0.91
HLA-DPA1-245ENST00000463066 CEP85Q6P2H3 762 aa20.75■□□□□ 0.91
HLA-DPA1-245ENST00000463066 GPC2Q8N158 579 aa20.74■□□□□ 0.91
HLA-DPA1-245ENST00000463066 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.74■□□□□ 0.91
HLA-DPA1-245ENST00000463066 PSMD14O00487 310 aa20.73■□□□□ 0.91
HLA-DPA1-245ENST00000463066 CIAO1O76071 339 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms