RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 GPR101Q96P66 508 aaPredicted RBP25.29■■□□□ 1.64
NUP43-205ENST00000463048 SIL1Q9H173 461 aa25.29■■□□□ 1.64
NUP43-205ENST00000463048 MINPP1Q9UNW1 487 aa25.29■■□□□ 1.64
NUP43-205ENST00000463048 PA2G4Q9UQ80 394 aaKnown RBP25.29■■□□□ 1.64
NUP43-205ENST00000463048 C6orf229H3BNL8 230 aa25.28■■□□□ 1.64
NUP43-205ENST00000463048 C9orf131Q5VYM1 1079 aa25.28■■□□□ 1.64
NUP43-205ENST00000463048 RNF181Q9P0P0 153 aa25.28■■□□□ 1.64
NUP43-205ENST00000463048 CCDC88AQ3V6T2 1871 aa25.28■■□□□ 1.64
NUP43-205ENST00000463048 PNMA6EA0A0J9YXQ4 647 aa25.27■■□□□ 1.64
NUP43-205ENST00000463048 WTIPA6NIX2 430 aaPredicted RBP25.27■■□□□ 1.64
NUP43-205ENST00000463048 RFX5P48382 616 aaPredicted RBP25.27■■□□□ 1.64
NUP43-205ENST00000463048 LRRC24Q50LG9 513 aa25.27■■□□□ 1.64
NUP43-205ENST00000463048 UTRNP46939 3433 aa25.27■■□□□ 1.64
NUP43-205ENST00000463048 SNED1Q8TER0 1413 aa25.27■■□□□ 1.64
NUP43-205ENST00000463048 TAF5LO75529 589 aa25.26■■□□□ 1.63
NUP43-205ENST00000463048 CHRNDQ07001 517 aa25.26■■□□□ 1.63
NUP43-205ENST00000463048 ZBTB40Q9NUA8 1239 aa25.26■■□□□ 1.63
NUP43-205ENST00000463048 UFL1O94874 794 aa25.25■■□□□ 1.63
NUP43-205ENST00000463048 LMNB1P20700 586 aa25.25■■□□□ 1.63
NUP43-205ENST00000463048 POLLQ9UGP5 575 aa25.25■■□□□ 1.63
NUP43-205ENST00000463048 SBF1O95248 1867 aa25.24■■□□□ 1.63
NUP43-205ENST00000463048 XDHP47989 1333 aa25.24■■□□□ 1.63
NUP43-205ENST00000463048 RIMBP2O15034 1052 aa25.24■■□□□ 1.63
NUP43-205ENST00000463048 PTPN12Q05209 780 aaKnown RBP25.24■■□□□ 1.63
NUP43-205ENST00000463048 PSMD1Q99460 953 aa25.24■■□□□ 1.63
NUP43-205ENST00000463048 CHMP4BQ9H444 224 aaKnown RBP25.24■■□□□ 1.63
NUP43-205ENST00000463048 GGA1Q9UJY5 639 aa25.24■■□□□ 1.63
NUP43-205ENST00000463048 DUOX1Q9NRD9 1551 aa25.23■■□□□ 1.63
NUP43-205ENST00000463048 LTBP3Q9NS15 1303 aa25.23■■□□□ 1.63
NUP43-205ENST00000463048 SNAP23O00161 211 aa25.23■■□□□ 1.63
NUP43-205ENST00000463048 IARSP41252 1262 aaKnown RBP25.23■■□□□ 1.63
NUP43-205ENST00000463048 ATP8B2P98198 1209 aa25.23■■□□□ 1.63
NUP43-205ENST00000463048 AOC3Q16853 763 aa25.23■■□□□ 1.63
NUP43-205ENST00000463048 GRIPAP1Q4V328 841 aa25.23■■□□□ 1.63
NUP43-205ENST00000463048 CEP85Q6P2H3 762 aa25.23■■□□□ 1.63
NUP43-205ENST00000463048 TBC1D16Q8TBP0 767 aa25.23■■□□□ 1.63
NUP43-205ENST00000463048 CHD4Q14839 1912 aa25.22■■□□□ 1.63
NUP43-205ENST00000463048 PPIP5K2O43314 1243 aa25.22■■□□□ 1.63
NUP43-205ENST00000463048 KCNJ4P48050 445 aa25.22■■□□□ 1.63
NUP43-205ENST00000463048 MTX1Q13505 466 aa25.22■■□□□ 1.63
NUP43-205ENST00000463048 SUPT20HQ8NEM7 779 aa25.22■■□□□ 1.63
NUP43-205ENST00000463048 ANKRD2Q9GZV1 360 aa25.22■■□□□ 1.63
NUP43-205ENST00000463048 METTL24Q5JXM2 366 aa25.21■■□□□ 1.63
NUP43-205ENST00000463048 LARGE2Q8N3Y3 721 aa25.21■■□□□ 1.63
NUP43-205ENST00000463048 RIPOR2Q9Y4F9 1068 aa25.21■■□□□ 1.63
NUP43-205ENST00000463048 LTBP1Q14766 1721 aa25.2■■□□□ 1.63
NUP43-205ENST00000463048 EYA2O00167 538 aa25.2■■□□□ 1.62
NUP43-205ENST00000463048 RTFDC1Q9BY42 306 aaPredicted RBP25.2■■□□□ 1.62
NUP43-205ENST00000463048 PODXL2Q9NZ53 605 aa25.2■■□□□ 1.62
NUP43-205ENST00000463048 A0A1B0GUL6 1792 aa25.19■■□□□ 1.62
NUP43-205ENST00000463048 ATP2B4P23634 1241 aa25.19■■□□□ 1.62
NUP43-205ENST00000463048 WASHC4Q2M389 1173 aa25.19■■□□□ 1.62
NUP43-205ENST00000463048 ATG9AQ7Z3C6 839 aa25.18■■□□□ 1.62
NUP43-205ENST00000463048 EXOC6Q8TAG9 804 aa25.18■■□□□ 1.62
NUP43-205ENST00000463048 COPRSQ9NQ92 184 aa25.18■■□□□ 1.62
NUP43-205ENST00000463048 TIAM2Q8IVF5 1701 aa25.17■■□□□ 1.62
NUP43-205ENST00000463048 ZNF804BA4D1E1 1349 aa25.17■■□□□ 1.62
NUP43-205ENST00000463048 COL4A5P29400 1685 aa25.17■■□□□ 1.62
NUP43-205ENST00000463048 CENPBP07199 599 aaPredicted RBP25.17■■□□□ 1.62
NUP43-205ENST00000463048 KLRK1P26718 216 aa25.17■■□□□ 1.62
NUP43-205ENST00000463048 POLA2Q14181 598 aa25.17■■□□□ 1.62
NUP43-205ENST00000463048 DOK7Q18PE1 504 aa25.17■■□□□ 1.62
NUP43-205ENST00000463048 SSH3Q8TE77 659 aa25.17■■□□□ 1.62
NUP43-205ENST00000463048 EYA3Q99504 573 aa25.17■■□□□ 1.62
NUP43-205ENST00000463048 MROH5Q6ZUA9 1318 aa25.16■■□□□ 1.62
NUP43-205ENST00000463048 OS9Q13438 667 aaPredicted RBP25.16■■□□□ 1.62
NUP43-205ENST00000463048 JDP2Q8WYK2 163 aa25.16■■□□□ 1.62
NUP43-205ENST00000463048 ZC3H12CQ9C0D7 883 aaKnown RBP25.16■■□□□ 1.62
NUP43-205ENST00000463048 G3V3G9 751 aa25.15■■□□□ 1.62
NUP43-205ENST00000463048 SURF6O75683 361 aaKnown RBP25.15■■□□□ 1.62
NUP43-205ENST00000463048 YY1P25490 414 aa25.15■■□□□ 1.62
NUP43-205ENST00000463048 DCAF8Q5TAQ9 597 aa25.15■■□□□ 1.62
NUP43-205ENST00000463048 SIRT2Q8IXJ6 389 aa25.15■■□□□ 1.62
NUP43-205ENST00000463048 NIM1KQ8IY84 436 aa25.15■■□□□ 1.62
NUP43-205ENST00000463048 DBNDD1Q9H9R9 158 aa25.15■■□□□ 1.62
NUP43-205ENST00000463048 LEMD3Q9Y2U8 911 aa25.15■■□□□ 1.62
NUP43-205ENST00000463048 KIAA2012Q0VF49 1180 aa25.14■■□□□ 1.62
NUP43-205ENST00000463048 G3BP1Q13283 466 aaKnown RBP eCLIP25.14■■□□□ 1.62
NUP43-205ENST00000463048 RPAP2Q8IXW5 612 aaPredicted RBP25.14■■□□□ 1.62
NUP43-205ENST00000463048 ZNF526Q8TF50 670 aaPredicted RBP25.14■■□□□ 1.62
NUP43-205ENST00000463048 DICER1Q9UPY3 1922 aaKnown RBP25.14■■□□□ 1.61
NUP43-205ENST00000463048 CIAO1O76071 339 aa25.13■■□□□ 1.61
NUP43-205ENST00000463048 IL15P40933 162 aaPredicted RBP25.13■■□□□ 1.61
NUP43-205ENST00000463048 TXNRD3Q86VQ6 643 aa25.13■■□□□ 1.61
NUP43-205ENST00000463048 BCL11AQ9H165 835 aa25.13■■□□□ 1.61
NUP43-205ENST00000463048 CEP126Q9P2H0 1117 aa25.12■■□□□ 1.61
NUP43-205ENST00000463048 EXOC6BQ9Y2D4 811 aa25.12■■□□□ 1.61
NUP43-205ENST00000463048 APBB1O00213 710 aa25.11■■□□□ 1.61
NUP43-205ENST00000463048 PDE8BO95263 885 aa25.11■■□□□ 1.61
NUP43-205ENST00000463048 TFCP2Q12800 502 aa25.11■■□□□ 1.61
NUP43-205ENST00000463048 VGLL2Q8N8G2 317 aa25.11■■□□□ 1.61
NUP43-205ENST00000463048 PCDHB15Q9Y5E8 787 aa25.11■■□□□ 1.61
NUP43-205ENST00000463048 HMMRO75330 724 aa25.1■■□□□ 1.61
NUP43-205ENST00000463048 FBXO3Q9UK99 471 aa25.1■■□□□ 1.61
NUP43-205ENST00000463048 ZNF541Q9H0D2 1346 aa25.1■■□□□ 1.61
NUP43-205ENST00000463048 MED23Q9ULK4 1368 aa25.09■■□□□ 1.61
NUP43-205ENST00000463048 ECE2O60344 883 aa25.09■■□□□ 1.61
NUP43-205ENST00000463048 VPS33BQ9H267 617 aa25.09■■□□□ 1.61
NUP43-205ENST00000463048 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.09■■□□□ 1.61
NUP43-205ENST00000463048 RAD17O75943 681 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms