RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 C3orf58Q8NDZ4 430 aa5.61□□□□□ -1.51
GPNMB-205ENST00000463011 RASGRP4Q8TDF6 673 aa5.61□□□□□ -1.51
GPNMB-205ENST00000463011 RUBCNLQ9H714 662 aa5.61□□□□□ -1.51
GPNMB-205ENST00000463011 GPAMQ9HCL2 828 aa5.61□□□□□ -1.51
GPNMB-205ENST00000463011 BRD7Q9NPI1 651 aa5.61□□□□□ -1.51
GPNMB-205ENST00000463011 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.61□□□□□ -1.51
GPNMB-205ENST00000463011 AKAP2Q9Y2D5 859 aa5.61□□□□□ -1.51
GPNMB-205ENST00000463011 SBNO2Q9Y2G9 1366 aa5.61□□□□□ -1.51
GPNMB-205ENST00000463011 FIGNL2A6NMB9 653 aa5.6□□□□□ -1.51
GPNMB-205ENST00000463011 POTECB2RU33 542 aa5.6□□□□□ -1.51
GPNMB-205ENST00000463011 TARSP26639 723 aaKnown RBP5.6□□□□□ -1.51
GPNMB-205ENST00000463011 EIF4A3P38919 411 aaKnown RBP5.6□□□□□ -1.51
GPNMB-205ENST00000463011 MAP3K10Q02779 954 aa5.6□□□□□ -1.51
GPNMB-205ENST00000463011 MAP3K11Q16584 847 aa5.6□□□□□ -1.51
GPNMB-205ENST00000463011 IFFO2Q5TF58 517 aa5.6□□□□□ -1.51
GPNMB-205ENST00000463011 PEAR1Q5VY43 1037 aaPredicted RBP5.6□□□□□ -1.51
GPNMB-205ENST00000463011 ZNF746Q6NUN9 644 aaPredicted RBP5.6□□□□□ -1.51
GPNMB-205ENST00000463011 KRT25Q7Z3Z0 450 aa5.6□□□□□ -1.51
GPNMB-205ENST00000463011 EAF1Q96JC9 268 aaPredicted RBP5.6□□□□□ -1.51
GPNMB-205ENST00000463011 SEC16BQ96JE7 1060 aa5.6□□□□□ -1.51
GPNMB-205ENST00000463011 OXCT2Q9BYC2 517 aaPredicted RBP5.6□□□□□ -1.51
GPNMB-205ENST00000463011 TRAK1Q9UPV9 953 aa5.6□□□□□ -1.51
GPNMB-205ENST00000463011 EFR3BQ9Y2G0 817 aa5.6□□□□□ -1.51
GPNMB-205ENST00000463011 FBXO24O75426 580 aa5.59□□□□□ -1.51
GPNMB-205ENST00000463011 EDN3P14138 238 aa5.59□□□□□ -1.51
GPNMB-205ENST00000463011 VEGFBP49765 207 aa5.59□□□□□ -1.51
GPNMB-205ENST00000463011 PWP1Q13610 501 aa5.59□□□□□ -1.51
GPNMB-205ENST00000463011 EGFLAMQ63HQ2 1017 aa5.59□□□□□ -1.51
GPNMB-205ENST00000463011 DTHD1Q6ZMT9 781 aa5.59□□□□□ -1.51
GPNMB-205ENST00000463011 JAZF1Q86VZ6 243 aa5.59□□□□□ -1.51
GPNMB-205ENST00000463011 NLGN1Q8N2Q7 840 aa5.59□□□□□ -1.51
GPNMB-205ENST00000463011 ZNF296Q8WUU4 475 aaPredicted RBP5.59□□□□□ -1.51
GPNMB-205ENST00000463011 MRFAP1L1Q96HT8 127 aa5.59□□□□□ -1.51
GPNMB-205ENST00000463011 TMEM74Q96NL1 305 aa5.59□□□□□ -1.51
GPNMB-205ENST00000463011 ZNF408Q9H9D4 720 aa5.59□□□□□ -1.51
GPNMB-205ENST00000463011 GINM1Q9NU53 330 aa5.59□□□□□ -1.51
GPNMB-205ENST00000463011 MRVI1Q9Y6F6 885 aa5.59□□□□□ -1.51
GPNMB-205ENST00000463011 TMEM238LA0A1B0GVL6 79 aa5.58□□□□□ -1.52
GPNMB-205ENST00000463011 PHF20L1A8MW92 1017 aa5.58□□□□□ -1.52
GPNMB-205ENST00000463011 K7ELQ4 463 aaPredicted RBP5.58□□□□□ -1.52
GPNMB-205ENST00000463011 MMP20O60882 483 aa5.58□□□□□ -1.52
GPNMB-205ENST00000463011 ETFBP38117 255 aa5.58□□□□□ -1.52
GPNMB-205ENST00000463011 SFSWAPQ12872 951 aaKnown RBP5.58□□□□□ -1.52
GPNMB-205ENST00000463011 NFX1Q12986 1120 aaKnown RBP5.58□□□□□ -1.52
GPNMB-205ENST00000463011 NFE2L2Q16236 605 aa5.58□□□□□ -1.52
GPNMB-205ENST00000463011 CTC1Q2NKJ3 1217 aa5.58□□□□□ -1.52
GPNMB-205ENST00000463011 LIN7BQ9HAP6 207 aa5.58□□□□□ -1.52
GPNMB-205ENST00000463011 C11orf16Q9NQ32 467 aa5.58□□□□□ -1.52
GPNMB-205ENST00000463011 SALL4Q9UJQ4 1053 aa5.58□□□□□ -1.52
GPNMB-205ENST00000463011 KCNH4Q9UQ05 1017 aa5.58□□□□□ -1.52
GPNMB-205ENST00000463011 TTLL8A6PVC2 850 aa5.57□□□□□ -1.52
GPNMB-205ENST00000463011 FAM160A1Q05DH4 1040 aa5.57□□□□□ -1.52
GPNMB-205ENST00000463011 TCEAL1Q15170 157 aa5.57□□□□□ -1.52
GPNMB-205ENST00000463011 MRPL14Q6P1L8 145 aaKnown RBP5.57□□□□□ -1.52
GPNMB-205ENST00000463011 FBXL19Q6PCT2 694 aa5.57□□□□□ -1.52
GPNMB-205ENST00000463011 TPTE2Q6XPS3 522 aa5.57□□□□□ -1.52
GPNMB-205ENST00000463011 ANKS3Q6ZW76 656 aa5.57□□□□□ -1.52
GPNMB-205ENST00000463011 PGBD3Q8N328 593 aa5.57□□□□□ -1.52
GPNMB-205ENST00000463011 OR13H1Q8NG92 308 aa5.57□□□□□ -1.52
GPNMB-205ENST00000463011 ZNF775Q96BV0 537 aaPredicted RBP5.57□□□□□ -1.52
GPNMB-205ENST00000463011 GAS2L1Q99501 681 aaPredicted RBP5.57□□□□□ -1.52
GPNMB-205ENST00000463011 CRISPLD1Q9H336 500 aa5.57□□□□□ -1.52
GPNMB-205ENST00000463011 ABCB6Q9NP58 842 aa5.57□□□□□ -1.52
GPNMB-205ENST00000463011 TLR6Q9Y2C9 796 aa5.57□□□□□ -1.52
GPNMB-205ENST00000463011 MRPL42Q9Y6G3 142 aaKnown RBP5.57□□□□□ -1.52
GPNMB-205ENST00000463011 TRPA1O75762 1119 aa5.56□□□□□ -1.52
GPNMB-205ENST00000463011 PF4P02776 101 aa5.56□□□□□ -1.52
GPNMB-205ENST00000463011 F11P03951 625 aa5.56□□□□□ -1.52
GPNMB-205ENST00000463011 RARAP10276 462 aa5.56□□□□□ -1.52
GPNMB-205ENST00000463011 RLBP1P12271 317 aa5.56□□□□□ -1.52
GPNMB-205ENST00000463011 XRCC5P13010 732 aaKnown RBP5.56□□□□□ -1.52
GPNMB-205ENST00000463011 ACPPP15309 386 aa5.56□□□□□ -1.52
GPNMB-205ENST00000463011 SERINC3Q13530 473 aa5.56□□□□□ -1.52
GPNMB-205ENST00000463011 CCINQ13939 588 aa5.56□□□□□ -1.52
GPNMB-205ENST00000463011 NBPF6Q5VWK0 638 aa5.56□□□□□ -1.52
GPNMB-205ENST00000463011 PRPF40BQ6NWY9 871 aaKnown RBP5.56□□□□□ -1.52
GPNMB-205ENST00000463011 SV2BQ7L1I2 683 aa5.56□□□□□ -1.52
GPNMB-205ENST00000463011 NLRP8Q86W28 1048 aa5.56□□□□□ -1.52
GPNMB-205ENST00000463011 NCAPG2Q86XI2 1143 aa5.56□□□□□ -1.52
GPNMB-205ENST00000463011 CPLX3Q8WVH0 158 aa5.56□□□□□ -1.52
GPNMB-205ENST00000463011 SPACA7Q96KW9 195 aa5.56□□□□□ -1.52
GPNMB-205ENST00000463011 NBPF4Q96M43 638 aa5.56□□□□□ -1.52
GPNMB-205ENST00000463011 TCF12Q99081 682 aa5.56□□□□□ -1.52
GPNMB-205ENST00000463011 GSX2Q9BZM3 304 aa5.56□□□□□ -1.52
GPNMB-205ENST00000463011 UBP1Q9NZI7 540 aa5.56□□□□□ -1.52
GPNMB-205ENST00000463011 PPM1HQ9ULR3 514 aa5.56□□□□□ -1.52
GPNMB-205ENST00000463011 CELA3AP09093 270 aa5.55□□□□□ -1.52
GPNMB-205ENST00000463011 LIG3P49916 1009 aa5.55□□□□□ -1.52
GPNMB-205ENST00000463011 COL13A1Q5TAT6 717 aaPredicted RBP5.55□□□□□ -1.52
GPNMB-205ENST00000463011 SAMD5Q5TGI4 173 aa5.55□□□□□ -1.52
GPNMB-205ENST00000463011 TRIM67Q6ZTA4 783 aa5.55□□□□□ -1.52
GPNMB-205ENST00000463011 PHC3Q8NDX5 983 aa5.55□□□□□ -1.52
GPNMB-205ENST00000463011 ANAPC16Q96DE5 110 aa5.55□□□□□ -1.52
GPNMB-205ENST00000463011 RHOVQ96L33 236 aa5.55□□□□□ -1.52
GPNMB-205ENST00000463011 SRPK1Q96SB4 655 aaKnown RBP5.55□□□□□ -1.52
GPNMB-205ENST00000463011 OSMRQ99650 979 aa5.55□□□□□ -1.52
GPNMB-205ENST00000463011 ZKSCAN3Q9BRR0 538 aa5.55□□□□□ -1.52
GPNMB-205ENST00000463011 NT5C1AQ9BXI3 368 aa5.55□□□□□ -1.52
GPNMB-205ENST00000463011 ZFATQ9P243 1243 aa5.55□□□□□ -1.52
GPNMB-205ENST00000463011 SOS2Q07890 1332 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms