RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	RTL9	Q8NET4	1388 aa		12.08	□□□□□ -0.48
PSMD4-208	ENST00000462970	DDN	O94850	711 aa	Predicted RBP	12.08	□□□□□ -0.48
PSMD4-208	ENST00000462970	CSF1R	P07333	972 aa		12.08	□□□□□ -0.48
PSMD4-208	ENST00000462970	UBTFL1	P0CB47	393 aa	Predicted RBP	12.08	□□□□□ -0.48
PSMD4-208	ENST00000462970	TRIM27	P14373	513 aa		12.08	□□□□□ -0.48
PSMD4-208	ENST00000462970	EIF6	P56537	245 aa	Known RBP	12.08	□□□□□ -0.48
PSMD4-208	ENST00000462970	ATF7IP	Q6VMQ6	1270 aa		12.08	□□□□□ -0.48
PSMD4-208	ENST00000462970	FTSJ3	Q8IY81	847 aa	Known RBP	12.08	□□□□□ -0.48
PSMD4-208	ENST00000462970	C16orf71	Q8IYS4	520 aa	Predicted RBP	12.08	□□□□□ -0.48
PSMD4-208	ENST00000462970	ZNF594	Q96JF6	807 aa	Predicted RBP	12.08	□□□□□ -0.48
PSMD4-208	ENST00000462970	USP44	Q9H0E7	712 aa		12.08	□□□□□ -0.48
PSMD4-208	ENST00000462970	BICC1	Q9H694	974 aa	Known RBP	12.08	□□□□□ -0.48
PSMD4-208	ENST00000462970	GGA1	Q9UJY5	639 aa		12.08	□□□□□ -0.48
PSMD4-208	ENST00000462970	SNED1	Q8TER0	1413 aa		12.08	□□□□□ -0.48
PSMD4-208	ENST00000462970	ZNF541	Q9H0D2	1346 aa		12.08	□□□□□ -0.48
PSMD4-208	ENST00000462970	COL4A5	P29400	1685 aa		12.07	□□□□□ -0.48
PSMD4-208	ENST00000462970	GLTPD2	A6NH11	291 aa		12.07	□□□□□ -0.48
PSMD4-208	ENST00000462970	PLIN1	O60240	522 aa		12.07	□□□□□ -0.48
PSMD4-208	ENST00000462970	HSPA6	P17066	643 aa		12.07	□□□□□ -0.48
PSMD4-208	ENST00000462970	WASHC4	Q2M389	1173 aa		12.07	□□□□□ -0.48
PSMD4-208	ENST00000462970	TBC1D16	Q8TBP0	767 aa		12.07	□□□□□ -0.48
PSMD4-208	ENST00000462970	ARHGAP45	Q92619	1136 aa		12.07	□□□□□ -0.48
PSMD4-208	ENST00000462970	EYA3	Q99504	573 aa		12.07	□□□□□ -0.48
PSMD4-208	ENST00000462970	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.07	□□□□□ -0.48
PSMD4-208	ENST00000462970	DUOX1	Q9NRD9	1551 aa		12.07	□□□□□ -0.48
PSMD4-208	ENST00000462970	BSDC1	Q9NW68	430 aa	Predicted RBP	12.07	□□□□□ -0.48
PSMD4-208	ENST00000462970	POLL	Q9UGP5	575 aa		12.07	□□□□□ -0.48
PSMD4-208	ENST00000462970	XDH	P47989	1333 aa		12.07	□□□□□ -0.48
PSMD4-208	ENST00000462970	KCNJ4	P48050	445 aa		12.06	□□□□□ -0.48
PSMD4-208	ENST00000462970	DOK7	Q18PE1	504 aa		12.06	□□□□□ -0.48
PSMD4-208	ENST00000462970	HELB	Q8NG08	1087 aa	Predicted RBP	12.06	□□□□□ -0.48
PSMD4-208	ENST00000462970	CNNM1	Q9NRU3	951 aa		12.06	□□□□□ -0.48
PSMD4-208	ENST00000462970	MINPP1	Q9UNW1	487 aa		12.06	□□□□□ -0.48
PSMD4-208	ENST00000462970	UTY	O14607	1347 aa		12.06	□□□□□ -0.48
PSMD4-208	ENST00000462970	KIAA2012	Q0VF49	1180 aa		12.05	□□□□□ -0.48
PSMD4-208	ENST00000462970	INTS3	Q68E01	1043 aa	Known RBP	12.05	□□□□□ -0.48
PSMD4-208	ENST00000462970	LDHAL6A	Q6ZMR3	332 aa		12.05	□□□□□ -0.48
PSMD4-208	ENST00000462970	ANKRD44	Q8N8A2	993 aa		12.05	□□□□□ -0.48
PSMD4-208	ENST00000462970	KAZALD1	Q96I82	304 aa		12.05	□□□□□ -0.48
PSMD4-208	ENST00000462970	MEIS3	Q99687	375 aa		12.05	□□□□□ -0.48
PSMD4-208	ENST00000462970	ZC3H12C	Q9C0D7	883 aa	Known RBP	12.05	□□□□□ -0.48
PSMD4-208	ENST00000462970	DBNDD1	Q9H9R9	158 aa		12.05	□□□□□ -0.48
PSMD4-208	ENST00000462970	RCAN3	Q9UKA8	241 aa		12.05	□□□□□ -0.48
PSMD4-208	ENST00000462970	ZNRF3	Q9ULT6	936 aa		12.05	□□□□□ -0.48
PSMD4-208	ENST00000462970	LRRFIP2	Q9Y608	721 aa	Known RBP	12.05	□□□□□ -0.48
PSMD4-208	ENST00000462970	LTBP1	Q14766	1721 aa		12.05	□□□□□ -0.48
PSMD4-208	ENST00000462970	RAD17	O75943	681 aa		12.04	□□□□□ -0.48
PSMD4-208	ENST00000462970	ATP2B4	P23634	1241 aa		12.04	□□□□□ -0.48
PSMD4-208	ENST00000462970	ITPRIP	Q8IWB1	547 aa		12.04	□□□□□ -0.48
PSMD4-208	ENST00000462970	DZIP1L	Q8IYY4	767 aa	Known RBP	12.04	□□□□□ -0.48
PSMD4-208	ENST00000462970	TMEM57	Q8N5G2	664 aa		12.04	□□□□□ -0.48
PSMD4-208	ENST00000462970	ANKRD2	Q9GZV1	360 aa		12.04	□□□□□ -0.48
PSMD4-208	ENST00000462970	VPS33B	Q9H267	617 aa		12.04	□□□□□ -0.48
PSMD4-208	ENST00000462970	PODXL2	Q9NZ53	605 aa		12.04	□□□□□ -0.48
PSMD4-208	ENST00000462970	HDAC5	Q9UQL6	1122 aa		12.04	□□□□□ -0.48
PSMD4-208	ENST00000462970		A0A1B0GUL6	1792 aa		12.04	□□□□□ -0.48
PSMD4-208	ENST00000462970	WTIP	A6NIX2	430 aa	Predicted RBP	12.03	□□□□□ -0.48
PSMD4-208	ENST00000462970	FZD9	O00144	591 aa		12.03	□□□□□ -0.48
PSMD4-208	ENST00000462970	ECE2	O60344	883 aa		12.03	□□□□□ -0.48
PSMD4-208	ENST00000462970	TAF5L	O75529	589 aa		12.03	□□□□□ -0.48
PSMD4-208	ENST00000462970	GNAI3	P08754	354 aa		12.03	□□□□□ -0.48
PSMD4-208	ENST00000462970	VEGFA	P15692	232 aa	Predicted RBP	12.03	□□□□□ -0.48
PSMD4-208	ENST00000462970	CHRND	Q07001	517 aa		12.03	□□□□□ -0.48
PSMD4-208	ENST00000462970	FBXW7	Q969H0	707 aa		12.03	□□□□□ -0.48
PSMD4-208	ENST00000462970	WDR90	Q96KV7	1748 aa		12.03	□□□□□ -0.48
PSMD4-208	ENST00000462970	TOMM70	O94826	608 aa		12.02	□□□□□ -0.49
PSMD4-208	ENST00000462970	LMOD1	P29536	600 aa	Predicted RBP	12.02	□□□□□ -0.49
PSMD4-208	ENST00000462970	HTRA3	P83110	453 aa		12.02	□□□□□ -0.49
PSMD4-208	ENST00000462970	CXCL9	Q07325	125 aa		12.02	□□□□□ -0.49
PSMD4-208	ENST00000462970	CIAPIN1	Q6FI81	312 aa		12.02	□□□□□ -0.49
PSMD4-208	ENST00000462970	GPC2	Q8N158	579 aa		12.02	□□□□□ -0.49
PSMD4-208	ENST00000462970	KLHDC4	Q8TBB5	520 aa		12.02	□□□□□ -0.49
PSMD4-208	ENST00000462970	PANK1	Q8TE04	598 aa		12.02	□□□□□ -0.49
PSMD4-208	ENST00000462970	PUS3	Q9BZE2	481 aa	Known RBP	12.02	□□□□□ -0.49
PSMD4-208	ENST00000462970	ZNF804B	A4D1E1	1349 aa		12.02	□□□□□ -0.49
PSMD4-208	ENST00000462970	SCN4A	P35499	1836 aa		12.02	□□□□□ -0.49
PSMD4-208	ENST00000462970	RLBP1	P12271	317 aa		12.01	□□□□□ -0.49
PSMD4-208	ENST00000462970	TNIP1	Q15025	636 aa		12.01	□□□□□ -0.49
PSMD4-208	ENST00000462970	RABL6	Q3YEC7	729 aa	Predicted RBP	12.01	□□□□□ -0.49
PSMD4-208	ENST00000462970	EAPP	Q56P03	285 aa	Predicted RBP	12.01	□□□□□ -0.49
PSMD4-208	ENST00000462970	SIL1	Q9H173	461 aa		12.01	□□□□□ -0.49
PSMD4-208	ENST00000462970	HACL1	Q9UJ83	578 aa		12.01	□□□□□ -0.49
PSMD4-208	ENST00000462970	LEMD3	Q9Y2U8	911 aa		12.01	□□□□□ -0.49
PSMD4-208	ENST00000462970	SCN9A	Q15858	1988 aa		12.01	□□□□□ -0.49
PSMD4-208	ENST00000462970	IQCA1L	A6NCM1	817 aa		12	□□□□□ -0.49
PSMD4-208	ENST00000462970	YDJC	A8MPS7	323 aa		12	□□□□□ -0.49
PSMD4-208	ENST00000462970	SNAP23	O00161	211 aa		12	□□□□□ -0.49
PSMD4-208	ENST00000462970	GNAI2	P04899	355 aa		12	□□□□□ -0.49
PSMD4-208	ENST00000462970	KLRK1	P26718	216 aa		12	□□□□□ -0.49
PSMD4-208	ENST00000462970	GMPS	P49915	693 aa	Predicted RBP	12	□□□□□ -0.49
PSMD4-208	ENST00000462970	LRRC24	Q50LG9	513 aa		12	□□□□□ -0.49
PSMD4-208	ENST00000462970	METTL24	Q5JXM2	366 aa		12	□□□□□ -0.49
PSMD4-208	ENST00000462970	C1orf115	Q9H7X2	142 aa		12	□□□□□ -0.49
PSMD4-208	ENST00000462970	KCNQ5	Q9NR82	932 aa		12	□□□□□ -0.49
PSMD4-208	ENST00000462970	POTEC	B2RU33	542 aa		11.99	□□□□□ -0.49
PSMD4-208	ENST00000462970	PSMD14	O00487	310 aa		11.99	□□□□□ -0.49
PSMD4-208	ENST00000462970	MS4A1	P11836	297 aa		11.99	□□□□□ -0.49
PSMD4-208	ENST00000462970	CLEC11A	Q9Y240	323 aa		11.99	□□□□□ -0.49
PSMD4-208	ENST00000462970	MED23	Q9ULK4	1368 aa		11.99	□□□□□ -0.49
PSMD4-208	ENST00000462970	MROH5	Q6ZUA9	1318 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms