RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 HPS5Q9UPZ3 1129 aa15.27■□□□□ 0.04
PCCB-203ENST00000462542 DUOX1Q9NRD9 1551 aa15.27■□□□□ 0.03
PCCB-203ENST00000462542 G3V3G9 751 aa15.26■□□□□ 0.03
PCCB-203ENST00000462542 RIPK4P57078 832 aa15.26■□□□□ 0.03
PCCB-203ENST00000462542 DCAF8Q5TAQ9 597 aa15.26■□□□□ 0.03
PCCB-203ENST00000462542 AGBL3Q8NEM8 1001 aa15.26■□□□□ 0.03
PCCB-203ENST00000462542 TBC1D16Q8TBP0 767 aa15.26■□□□□ 0.03
PCCB-203ENST00000462542 GGA3Q9NZ52 723 aa15.26■□□□□ 0.03
PCCB-203ENST00000462542 HDAC9Q9UKV0 1011 aa15.26■□□□□ 0.03
PCCB-203ENST00000462542 TAF1P21675 1872 aa15.26■□□□□ 0.03
PCCB-203ENST00000462542 LRRC37AA6NMS7 1700 aa15.26■□□□□ 0.03
PCCB-203ENST00000462542 RTL9Q8NET4 1388 aa15.25■□□□□ 0.03
PCCB-203ENST00000462542 HSP90B1P14625 803 aaKnown RBP15.25■□□□□ 0.03
PCCB-203ENST00000462542 ZNF280AP59817 542 aaPredicted RBP15.25■□□□□ 0.03
PCCB-203ENST00000462542 SCARF1Q14162 830 aa15.25■□□□□ 0.03
PCCB-203ENST00000462542 ANKRD13DQ6ZTN6 518 aa15.25■□□□□ 0.03
PCCB-203ENST00000462542 PLBD2Q8NHP8 589 aa15.25■□□□□ 0.03
PCCB-203ENST00000462542 FAM89AQ96GI7 184 aa15.25■□□□□ 0.03
PCCB-203ENST00000462542 PODXL2Q9NZ53 605 aa15.25■□□□□ 0.03
PCCB-203ENST00000462542 LMOD3Q0VAK6 560 aa15.24■□□□□ 0.03
PCCB-203ENST00000462542 TRIM28Q13263 835 aaKnown RBP15.24■□□□□ 0.03
PCCB-203ENST00000462542 NOM1Q5C9Z4 860 aaKnown RBP15.24■□□□□ 0.03
PCCB-203ENST00000462542 RASAL3Q86YV0 1011 aa15.24■□□□□ 0.03
PCCB-203ENST00000462542 GCC1Q96CN9 775 aa15.24■□□□□ 0.03
PCCB-203ENST00000462542 ISCA1Q9BUE6 129 aa15.24■□□□□ 0.03
PCCB-203ENST00000462542 PITPNM2Q9BZ72 1349 aa15.23■□□□□ 0.03
PCCB-203ENST00000462542 TM4SF4P48230 202 aa15.23■□□□□ 0.03
PCCB-203ENST00000462542 ANGEL2Q5VTE6 544 aaKnown RBP15.23■□□□□ 0.03
PCCB-203ENST00000462542 RSBN1LQ6PCB5 846 aaPredicted RBP15.23■□□□□ 0.03
PCCB-203ENST00000462542 ZNF296Q8WUU4 475 aaPredicted RBP15.22■□□□□ 0.03
PCCB-203ENST00000462542 ANKIB1Q9P2G1 1089 aa15.22■□□□□ 0.03
PCCB-203ENST00000462542 ASTN2O75129 1339 aaPredicted RBP15.21■□□□□ 0.03
PCCB-203ENST00000462542 DDX60Q8IY21 1712 aaKnown RBP15.21■□□□□ 0.03
PCCB-203ENST00000462542 ZNF609O15014 1411 aa15.21■□□□□ 0.03
PCCB-203ENST00000462542 IRS4O14654 1257 aaPredicted RBP15.21■□□□□ 0.03
PCCB-203ENST00000462542 USP17L8P0C7I0 530 aa15.21■□□□□ 0.03
PCCB-203ENST00000462542 MYOZ2Q9NPC6 264 aa15.21■□□□□ 0.03
PCCB-203ENST00000462542 DBF4Q9UBU7 674 aaPredicted RBP15.21■□□□□ 0.03
PCCB-203ENST00000462542 GGA1Q9UJY5 639 aa15.21■□□□□ 0.03
PCCB-203ENST00000462542 ATP5J2-PTCD1G3V325 749 aa15.2■□□□□ 0.02
PCCB-203ENST00000462542 CHL1O00533 1208 aa15.2■□□□□ 0.02
PCCB-203ENST00000462542 UFL1O94874 794 aa15.2■□□□□ 0.02
PCCB-203ENST00000462542 TBC1D8O95759 1140 aa15.2■□□□□ 0.02
PCCB-203ENST00000462542 HOXB7P09629 217 aa15.2■□□□□ 0.02
PCCB-203ENST00000462542 FBXO46Q6PJ61 603 aaPredicted RBP15.2■□□□□ 0.02
PCCB-203ENST00000462542 PODNQ7Z5L7 613 aa15.2■□□□□ 0.02
PCCB-203ENST00000462542 GMLQ99445 158 aa15.2■□□□□ 0.02
PCCB-203ENST00000462542 HYPKQ9NX55 129 aa15.2■□□□□ 0.02
PCCB-203ENST00000462542 CHPF2Q9P2E5 772 aa15.2■□□□□ 0.02
PCCB-203ENST00000462542 UBE2Q2LH0YL09 131 aa15.19■□□□□ 0.02
PCCB-203ENST00000462542 GPR25O00155 361 aa15.19■□□□□ 0.02
PCCB-203ENST00000462542 TMPOP42166 694 aaKnown RBP15.19■□□□□ 0.02
PCCB-203ENST00000462542 MMP14P50281 582 aa15.19■□□□□ 0.02
PCCB-203ENST00000462542 USP17L3A6NCW0 530 aa15.18■□□□□ 0.02
PCCB-203ENST00000462542 USP17L4A6NCW7 530 aa15.18■□□□□ 0.02
PCCB-203ENST00000462542 NF2P35240 595 aa15.18■□□□□ 0.02
PCCB-203ENST00000462542 SREBF2Q12772 1141 aa15.18■□□□□ 0.02
PCCB-203ENST00000462542 RTL5Q5HYW3 569 aaPredicted RBP15.18■□□□□ 0.02
PCCB-203ENST00000462542 HDGFL1Q5TGJ6 251 aa15.18■□□□□ 0.02
PCCB-203ENST00000462542 USP17L1Q7RTZ2 530 aa15.18■□□□□ 0.02
PCCB-203ENST00000462542 ZBTB38Q8NAP3 1195 aaPredicted RBP15.18■□□□□ 0.02
PCCB-203ENST00000462542 ZNF428Q96B54 188 aa15.18■□□□□ 0.02
PCCB-203ENST00000462542 CFHR5Q9BXR6 569 aa15.18■□□□□ 0.02
PCCB-203ENST00000462542 PAPPA2Q9BXP8 1791 aa15.18■□□□□ 0.02
PCCB-203ENST00000462542 SCN9AQ15858 1988 aa15.17■□□□□ 0.02
PCCB-203ENST00000462542 FKTNO75072 461 aa15.17■□□□□ 0.02
PCCB-203ENST00000462542 CCDC152Q4G0S7 254 aa15.17■□□□□ 0.02
PCCB-203ENST00000462542 ATP2B4P23634 1241 aa15.16■□□□□ 0.02
PCCB-203ENST00000462542 TTLL12Q14166 644 aaPredicted RBP15.16■□□□□ 0.02
PCCB-203ENST00000462542 MOB2Q70IA6 237 aa15.16■□□□□ 0.02
PCCB-203ENST00000462542 OGFOD1Q8N543 542 aa15.16■□□□□ 0.02
PCCB-203ENST00000462542 SEC31BQ9NQW1 1179 aa15.16■□□□□ 0.02
PCCB-203ENST00000462542 XDHP47989 1333 aa15.16■□□□□ 0.02
PCCB-203ENST00000462542 ALDH1A1P00352 501 aa15.15■□□□□ 0.02
PCCB-203ENST00000462542 INHBEP58166 350 aa15.15■□□□□ 0.02
PCCB-203ENST00000462542 KRT24Q2M2I5 525 aa15.15■□□□□ 0.02
PCCB-203ENST00000462542 INTS3Q68E01 1043 aaKnown RBP15.15■□□□□ 0.02
PCCB-203ENST00000462542 RIC3Q7Z5B4 369 aa15.15■□□□□ 0.02
PCCB-203ENST00000462542 LAS1LQ9Y4W2 734 aaKnown RBP15.15■□□□□ 0.02
PCCB-203ENST00000462542 PDE8AO60658 829 aa15.14■□□□□ 0.01
PCCB-203ENST00000462542 NBPF9Q3BBW0 867 aa15.14■□□□□ 0.01
PCCB-203ENST00000462542 ARMC9Q7Z3E5 817 aa15.14■□□□□ 0.01
PCCB-203ENST00000462542 PCCAP05165 728 aaPredicted RBP15.13■□□□□ 0.01
PCCB-203ENST00000462542 PRAMEF18Q5VWM3 479 aa15.13■□□□□ 0.01
PCCB-203ENST00000462542 ANKRD18AQ8IVF6 992 aa15.13■□□□□ 0.01
PCCB-203ENST00000462542 CCDC191Q8NCU4 936 aa15.13■□□□□ 0.01
PCCB-203ENST00000462542 MYO3BQ8WXR4 1341 aa15.13■□□□□ 0.01
PCCB-203ENST00000462542 WNT10BO00744 389 aa15.12■□□□□ 0.01
PCCB-203ENST00000462542 GOLGA2Q08379 1002 aa15.12■□□□□ 0.01
PCCB-203ENST00000462542 NEUROD2Q15784 382 aa15.12■□□□□ 0.01
PCCB-203ENST00000462542 PSME4Q14997 1843 aa15.12■□□□□ 0.01
PCCB-203ENST00000462542 PTPN12Q05209 780 aaKnown RBP15.11■□□□□ 0.01
PCCB-203ENST00000462542 HABP4Q5JVS0 413 aaKnown RBP15.11■□□□□ 0.01
PCCB-203ENST00000462542 LDLRAD1Q5T700 205 aa15.11■□□□□ 0.01
PCCB-203ENST00000462542 STRIP1Q5VSL9 837 aa15.11■□□□□ 0.01
PCCB-203ENST00000462542 DUSP27Q5VZP5 1158 aa15.11■□□□□ 0.01
PCCB-203ENST00000462542 SCAF8Q9UPN6 1271 aaKnown RBP15.11■□□□□ 0.01
PCCB-203ENST00000462542 COL4A1P02462 1669 aa15.11■□□□□ 0.01
PCCB-203ENST00000462542 MANSC4A6NHS7 340 aaPredicted RBP15.1■□□□□ 0.01
PCCB-203ENST00000462542 DACT2Q5SW24 774 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms