RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 PODXL2Q9NZ53 605 aa23.39■■□□□ 1.33
CDKN1A-206ENST00000462537 LMBR1LQ6UX01 489 aa23.38■■□□□ 1.33
CDKN1A-206ENST00000462537 SMC1BQ8NDV3 1235 aa23.38■■□□□ 1.33
CDKN1A-206ENST00000462537 MPHOSPH8Q99549 860 aa23.38■■□□□ 1.33
CDKN1A-206ENST00000462537 HACL1Q9UJ83 578 aa23.38■■□□□ 1.33
CDKN1A-206ENST00000462537 ZBED9Q6R2W3 1325 aa23.37■■□□□ 1.33
CDKN1A-206ENST00000462537 NBPF7P0C2Y1 421 aaPredicted RBP23.37■■□□□ 1.33
CDKN1A-206ENST00000462537 FSTL1Q12841 308 aa23.37■■□□□ 1.33
CDKN1A-206ENST00000462537 IFIT5Q13325 482 aaKnown RBP23.37■■□□□ 1.33
CDKN1A-206ENST00000462537 EPHA10Q5JZY3 1008 aa23.37■■□□□ 1.33
CDKN1A-206ENST00000462537 KIF16BQ96L93 1317 aa23.36■■□□□ 1.33
CDKN1A-206ENST00000462537 G3V3G9 751 aa23.36■■□□□ 1.33
CDKN1A-206ENST00000462537 HSPA6P17066 643 aa23.36■■□□□ 1.33
CDKN1A-206ENST00000462537 LMOD1P29536 600 aaPredicted RBP23.36■■□□□ 1.33
CDKN1A-206ENST00000462537 DCAF8Q5TAQ9 597 aa23.36■■□□□ 1.33
CDKN1A-206ENST00000462537 SUCLG2Q96I99 432 aa23.36■■□□□ 1.33
CDKN1A-206ENST00000462537 API5Q9BZZ5 524 aaKnown RBP23.36■■□□□ 1.33
CDKN1A-206ENST00000462537 ZC3H12CQ9C0D7 883 aaKnown RBP23.36■■□□□ 1.33
CDKN1A-206ENST00000462537 DBNDD1Q9H9R9 158 aa23.36■■□□□ 1.33
CDKN1A-206ENST00000462537 MINPP1Q9UNW1 487 aa23.36■■□□□ 1.33
CDKN1A-206ENST00000462537 RAD17O75943 681 aa23.35■■□□□ 1.33
CDKN1A-206ENST00000462537 ATP2B4P23634 1241 aa23.35■■□□□ 1.33
CDKN1A-206ENST00000462537 BRPF1P55201 1214 aaPredicted RBP23.35■■□□□ 1.33
CDKN1A-206ENST00000462537 CXCL9Q07325 125 aa23.35■■□□□ 1.33
CDKN1A-206ENST00000462537 DOK7Q18PE1 504 aa23.35■■□□□ 1.33
CDKN1A-206ENST00000462537 CIAPIN1Q6FI81 312 aa23.35■■□□□ 1.33
CDKN1A-206ENST00000462537 TAF1DQ9H5J8 278 aaPredicted RBP23.35■■□□□ 1.33
CDKN1A-206ENST00000462537 UTYO14607 1347 aa23.34■■□□□ 1.33
CDKN1A-206ENST00000462537 ECE2O60344 883 aa23.34■■□□□ 1.33
CDKN1A-206ENST00000462537 TNIP1Q15025 636 aa23.34■■□□□ 1.33
CDKN1A-206ENST00000462537 CCDC57Q2TAC2 916 aa23.34■■□□□ 1.33
CDKN1A-206ENST00000462537 EAPPQ56P03 285 aaPredicted RBP23.34■■□□□ 1.33
CDKN1A-206ENST00000462537 TAF7LQ5H9L4 462 aa23.34■■□□□ 1.33
CDKN1A-206ENST00000462537 YDJCA8MPS7 323 aa23.33■■□□□ 1.33
CDKN1A-206ENST00000462537 EPHX2P34913 555 aa23.33■■□□□ 1.33
CDKN1A-206ENST00000462537 CCT4P50991 539 aaKnown RBP23.33■■□□□ 1.33
CDKN1A-206ENST00000462537 POTEIP0CG38 1075 aa23.32■■□□□ 1.32
CDKN1A-206ENST00000462537 POTEJP0CG39 1038 aa23.32■■□□□ 1.32
CDKN1A-206ENST00000462537 FRAT1Q92837 279 aaPredicted RBP23.31■■□□□ 1.32
CDKN1A-206ENST00000462537 ZNF594Q96JF6 807 aaPredicted RBP23.31■■□□□ 1.32
CDKN1A-206ENST00000462537 ANKRD2Q9GZV1 360 aa23.31■■□□□ 1.32
CDKN1A-206ENST00000462537 USP44Q9H0E7 712 aa23.31■■□□□ 1.32
CDKN1A-206ENST00000462537 BICC1Q9H694 974 aaKnown RBP23.31■■□□□ 1.32
CDKN1A-206ENST00000462537 BCAR3O75815 825 aa23.3■■□□□ 1.32
CDKN1A-206ENST00000462537 GMPSP49915 693 aaPredicted RBP23.3■■□□□ 1.32
CDKN1A-206ENST00000462537 SCNN1DP51172 638 aa23.3■■□□□ 1.32
CDKN1A-206ENST00000462537 PNMA8AQ86V59 439 aaPredicted RBP23.3■■□□□ 1.32
CDKN1A-206ENST00000462537 KAZALD1Q96I82 304 aa23.3■■□□□ 1.32
CDKN1A-206ENST00000462537 CLEC11AQ9Y240 323 aa23.3■■□□□ 1.32
CDKN1A-206ENST00000462537 WTIPA6NIX2 430 aaPredicted RBP23.29■■□□□ 1.32
CDKN1A-206ENST00000462537 IPO8O15397 1037 aaKnown RBP23.29■■□□□ 1.32
CDKN1A-206ENST00000462537 EPS15P42566 896 aa23.29■■□□□ 1.32
CDKN1A-206ENST00000462537 KCNJ4P48050 445 aa23.29■■□□□ 1.32
CDKN1A-206ENST00000462537 CHRNDQ07001 517 aa23.29■■□□□ 1.32
CDKN1A-206ENST00000462537 CHADLQ6NUI6 762 aa23.29■■□□□ 1.32
CDKN1A-206ENST00000462537 LDHDQ86WU2 507 aa23.29■■□□□ 1.32
CDKN1A-206ENST00000462537 ARHGAP45Q92619 1136 aa23.29■■□□□ 1.32
CDKN1A-206ENST00000462537 CNNM1Q9NRU3 951 aa23.29■■□□□ 1.32
CDKN1A-206ENST00000462537 A0A1B0GUL6 1792 aa23.29■■□□□ 1.32
CDKN1A-206ENST00000462537 MED23Q9ULK4 1368 aa23.28■■□□□ 1.32
CDKN1A-206ENST00000462537 LDHAL6AQ6ZMR3 332 aa23.28■■□□□ 1.32
CDKN1A-206ENST00000462537 LEMD3Q9Y2U8 911 aa23.28■■□□□ 1.32
CDKN1A-206ENST00000462537 PSMD14O00487 310 aa23.27■■□□□ 1.32
CDKN1A-206ENST00000462537 APLP1P51693 650 aa23.27■■□□□ 1.32
CDKN1A-206ENST00000462537 KCNQ5Q9NR82 932 aa23.27■■□□□ 1.32
CDKN1A-206ENST00000462537 GPRC5DQ9NZD1 345 aa23.27■■□□□ 1.32
CDKN1A-206ENST00000462537 ZNF804BA4D1E1 1349 aa23.27■■□□□ 1.32
CDKN1A-206ENST00000462537 UBTFL1P0CB47 393 aaPredicted RBP23.26■■□□□ 1.31
CDKN1A-206ENST00000462537 HELBQ8NG08 1087 aaPredicted RBP23.26■■□□□ 1.31
CDKN1A-206ENST00000462537 SCN9AQ15858 1988 aa23.25■■□□□ 1.31
CDKN1A-206ENST00000462537 ADAMTSL1Q8N6G6 1762 aa23.25■■□□□ 1.31
CDKN1A-206ENST00000462537 TAF5LO75529 589 aa23.25■■□□□ 1.31
CDKN1A-206ENST00000462537 RABL6Q3YEC7 729 aaPredicted RBP23.25■■□□□ 1.31
CDKN1A-206ENST00000462537 ANKRD44Q8N8A2 993 aa23.25■■□□□ 1.31
CDKN1A-206ENST00000462537 ZBTB12Q9Y330 459 aaPredicted RBP23.25■■□□□ 1.31
CDKN1A-206ENST00000462537 PLIN1O60240 522 aa23.24■■□□□ 1.31
CDKN1A-206ENST00000462537 ATF7IPQ6VMQ6 1270 aa23.24■■□□□ 1.31
CDKN1A-206ENST00000462537 TRIM27P14373 513 aa23.23■■□□□ 1.31
CDKN1A-206ENST00000462537 USP50Q70EL3 339 aaPredicted RBP23.23■■□□□ 1.31
CDKN1A-206ENST00000462537 ADARB2Q9NS39 739 aaKnown RBP23.23■■□□□ 1.31
CDKN1A-206ENST00000462537 PSME4Q14997 1843 aa23.22■■□□□ 1.31
CDKN1A-206ENST00000462537 INTS3Q68E01 1043 aaKnown RBP23.22■■□□□ 1.31
CDKN1A-206ENST00000462537 PODNQ7Z5L7 613 aa23.22■■□□□ 1.31
CDKN1A-206ENST00000462537 CLUAP1Q96AJ1 413 aa23.22■■□□□ 1.31
CDKN1A-206ENST00000462537 CNOT7Q9UIV1 285 aaKnown RBP23.22■■□□□ 1.31
CDKN1A-206ENST00000462537 H7C1D1 291 aa23.21■■□□□ 1.31
CDKN1A-206ENST00000462537 RPS12P25398 132 aaKnown RBP23.21■■□□□ 1.31
CDKN1A-206ENST00000462537 KLRK1P26718 216 aa23.21■■□□□ 1.31
CDKN1A-206ENST00000462537 ZKSCAN2Q63HK3 967 aa23.21■■□□□ 1.31
CDKN1A-206ENST00000462537 TXNRD3Q86VQ6 643 aa23.21■■□□□ 1.31
CDKN1A-206ENST00000462537 MICALL2Q8IY33 904 aa23.21■■□□□ 1.31
CDKN1A-206ENST00000462537 FBXW7Q969H0 707 aa23.21■■□□□ 1.31
CDKN1A-206ENST00000462537 PUS3Q9BZE2 481 aaKnown RBP23.21■■□□□ 1.31
CDKN1A-206ENST00000462537 HDAC5Q9UQL6 1122 aa23.21■■□□□ 1.31
CDKN1A-206ENST00000462537 TNNQ9UQP3 1299 aa23.21■■□□□ 1.31
CDKN1A-206ENST00000462537 SNAP23O00161 211 aa23.2■■□□□ 1.3
CDKN1A-206ENST00000462537 MAP1SQ66K74 1059 aaPredicted RBP23.2■■□□□ 1.3
CDKN1A-206ENST00000462537 DPF2Q92785 391 aa23.2■■□□□ 1.3
CDKN1A-206ENST00000462537 MEIS3Q99687 375 aa23.2■■□□□ 1.3
CDKN1A-206ENST00000462537 COA1Q9GZY4 146 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms