RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 ZNF521Q96K83 1311 aa11.26□□□□□ -0.61
DDX39B-216ENST00000462421 KIF16BQ96L93 1317 aa11.26□□□□□ -0.61
DDX39B-216ENST00000462421 ECE2O60344 883 aa11.25□□□□□ -0.61
DDX39B-216ENST00000462421 RAD17O75943 681 aa11.25□□□□□ -0.61
DDX39B-216ENST00000462421 CCT4P50991 539 aaKnown RBP11.25□□□□□ -0.61
DDX39B-216ENST00000462421 PRELPP51888 382 aa11.25□□□□□ -0.61
DDX39B-216ENST00000462421 USP50Q70EL3 339 aaPredicted RBP11.25□□□□□ -0.61
DDX39B-216ENST00000462421 TTLL11Q8NHH1 800 aa11.25□□□□□ -0.61
DDX39B-216ENST00000462421 TBC1D16Q8TBP0 767 aa11.25□□□□□ -0.61
DDX39B-216ENST00000462421 PLA2G12BQ9BX93 195 aa11.25□□□□□ -0.61
DDX39B-216ENST00000462421 GREM2Q9H772 168 aa11.25□□□□□ -0.61
DDX39B-216ENST00000462421 DBNDD1Q9H9R9 158 aa11.25□□□□□ -0.61
DDX39B-216ENST00000462421 SPINK5Q9NQ38 1064 aaPredicted RBP11.25□□□□□ -0.61
DDX39B-216ENST00000462421 ADARB2Q9NS39 739 aaKnown RBP11.25□□□□□ -0.61
DDX39B-216ENST00000462421 RPS12P25398 132 aaKnown RBP11.24□□□□□ -0.61
DDX39B-216ENST00000462421 FAM161AQ3B820 660 aa11.24□□□□□ -0.61
DDX39B-216ENST00000462421 BEND3Q5T5X7 828 aa11.24□□□□□ -0.61
DDX39B-216ENST00000462421 MIER1Q8N108 512 aa11.24□□□□□ -0.61
DDX39B-216ENST00000462421 PODXL2Q9NZ53 605 aa11.24□□□□□ -0.61
DDX39B-216ENST00000462421 RTL9Q8NET4 1388 aa11.24□□□□□ -0.61
DDX39B-216ENST00000462421 WDR90Q96KV7 1748 aa11.23□□□□□ -0.61
DDX39B-216ENST00000462421 CXCL9Q07325 125 aa11.23□□□□□ -0.61
DDX39B-216ENST00000462421 DOK7Q18PE1 504 aa11.23□□□□□ -0.61
DDX39B-216ENST00000462421 VPS37DQ86XT2 251 aa11.23□□□□□ -0.61
DDX39B-216ENST00000462421 OGFOD1Q8N543 542 aa11.23□□□□□ -0.61
DDX39B-216ENST00000462421 LEMD3Q9Y2U8 911 aa11.23□□□□□ -0.61
DDX39B-216ENST00000462421 SBF1O95248 1867 aa11.23□□□□□ -0.61
DDX39B-216ENST00000462421 UBTFL1P0CB47 393 aaPredicted RBP11.22□□□□□ -0.61
DDX39B-216ENST00000462421 GMPSP49915 693 aaPredicted RBP11.22□□□□□ -0.61
DDX39B-216ENST00000462421 LAMB2P55268 1798 aa11.22□□□□□ -0.61
DDX39B-216ENST00000462421 LMBR1LQ6UX01 489 aa11.22□□□□□ -0.61
DDX39B-216ENST00000462421 LDHAL6AQ6ZMR3 332 aa11.22□□□□□ -0.61
DDX39B-216ENST00000462421 PAXIP1Q6ZW49 1069 aaPredicted RBP11.22□□□□□ -0.61
DDX39B-216ENST00000462421 ZNF804AQ7Z570 1209 aa11.22□□□□□ -0.61
DDX39B-216ENST00000462421 FTSJ3Q8IY81 847 aaKnown RBP11.22□□□□□ -0.61
DDX39B-216ENST00000462421 MRPL50Q8N5N7 158 aaKnown RBP11.22□□□□□ -0.61
DDX39B-216ENST00000462421 SSH1Q8WYL5 1049 aa11.22□□□□□ -0.61
DDX39B-216ENST00000462421 CDCA7LQ96GN5 454 aa11.22□□□□□ -0.61
DDX39B-216ENST00000462421 HDAC9Q9UKV0 1011 aa11.22□□□□□ -0.61
DDX39B-216ENST00000462421 ZNF804BA4D1E1 1349 aa11.21□□□□□ -0.61
DDX39B-216ENST00000462421 MYO3BQ8WXR4 1341 aa11.21□□□□□ -0.61
DDX39B-216ENST00000462421 PLIN1O60240 522 aa11.21□□□□□ -0.61
DDX39B-216ENST00000462421 FRAT2O75474 233 aaPredicted RBP11.21□□□□□ -0.61
DDX39B-216ENST00000462421 PODNQ7Z5L7 613 aa11.21□□□□□ -0.61
DDX39B-216ENST00000462421 FRAT1Q92837 279 aaPredicted RBP11.21□□□□□ -0.61
DDX39B-216ENST00000462421 GPRC5DQ9NZD1 345 aa11.21□□□□□ -0.61
DDX39B-216ENST00000462421 POLLQ9UGP5 575 aa11.21□□□□□ -0.61
DDX39B-216ENST00000462421 ABT1Q9ULW3 272 aaKnown RBP11.21□□□□□ -0.61
DDX39B-216ENST00000462421 MINPP1Q9UNW1 487 aa11.21□□□□□ -0.61
DDX39B-216ENST00000462421 DDX60Q8IY21 1712 aaKnown RBP11.21□□□□□ -0.62
DDX39B-216ENST00000462421 MED23Q9ULK4 1368 aa11.2□□□□□ -0.62
DDX39B-216ENST00000462421 DICER1Q9UPY3 1922 aaKnown RBP11.2□□□□□ -0.62
DDX39B-216ENST00000462421 USP17L3A6NCW0 530 aa11.2□□□□□ -0.62
DDX39B-216ENST00000462421 USP17L4A6NCW7 530 aa11.2□□□□□ -0.62
DDX39B-216ENST00000462421 PSMD14O00487 310 aa11.2□□□□□ -0.62
DDX39B-216ENST00000462421 USP17L1Q7RTZ2 530 aa11.2□□□□□ -0.62
DDX39B-216ENST00000462421 MICALL2Q8IY33 904 aa11.2□□□□□ -0.62
DDX39B-216ENST00000462421 CNTROBQ8N137 903 aa11.2□□□□□ -0.62
DDX39B-216ENST00000462421 DPF2Q92785 391 aa11.2□□□□□ -0.62
DDX39B-216ENST00000462421 DCPSQ96C86 337 aaKnown RBP11.2□□□□□ -0.62
DDX39B-216ENST00000462421 COA1Q9GZY4 146 aa11.2□□□□□ -0.62
DDX39B-216ENST00000462421 CREBZFQ9NS37 354 aa11.2□□□□□ -0.62
DDX39B-216ENST00000462421 CNOT7Q9UIV1 285 aaKnown RBP11.2□□□□□ -0.62
DDX39B-216ENST00000462421 MROH5Q6ZUA9 1318 aa11.19□□□□□ -0.62
DDX39B-216ENST00000462421 TMEM88BA6NKF7 163 aa11.19□□□□□ -0.62
DDX39B-216ENST00000462421 CSF1RP07333 972 aa11.19□□□□□ -0.62
DDX39B-216ENST00000462421 EPS15P42566 896 aa11.19□□□□□ -0.62
DDX39B-216ENST00000462421 MMP14P50281 582 aa11.19□□□□□ -0.62
DDX39B-216ENST00000462421 SCNN1DP51172 638 aa11.19□□□□□ -0.62
DDX39B-216ENST00000462421 CHRNDQ07001 517 aa11.19□□□□□ -0.62
DDX39B-216ENST00000462421 CAVIN4Q5BKX8 364 aa11.19□□□□□ -0.62
DDX39B-216ENST00000462421 RBM26Q5T8P6 1007 aaKnown RBP11.19□□□□□ -0.62
DDX39B-216ENST00000462421 ZC3H15Q8WU90 426 aaKnown RBP11.19□□□□□ -0.62
DDX39B-216ENST00000462421 NOB1Q9ULX3 412 aaKnown RBP11.19□□□□□ -0.62
DDX39B-216ENST00000462421 CACNA1FO60840 1977 aa11.19□□□□□ -0.62
DDX39B-216ENST00000462421 CCDC88AQ3V6T2 1871 aa11.19□□□□□ -0.62
DDX39B-216ENST00000462421 SCN4AP35499 1836 aa11.19□□□□□ -0.62
DDX39B-216ENST00000462421 SNED1Q8TER0 1413 aa11.18□□□□□ -0.62
DDX39B-216ENST00000462421 GNAI3P08754 354 aa11.18□□□□□ -0.62
DDX39B-216ENST00000462421 METTL24Q5JXM2 366 aa11.18□□□□□ -0.62
DDX39B-216ENST00000462421 MAP1SQ66K74 1059 aaPredicted RBP11.18□□□□□ -0.62
DDX39B-216ENST00000462421 SULF1Q8IWU6 871 aa11.18□□□□□ -0.62
DDX39B-216ENST00000462421 AGBL3Q8NEM8 1001 aa11.18□□□□□ -0.62
DDX39B-216ENST00000462421 SP7Q8TDD2 431 aaPredicted RBP11.18□□□□□ -0.62
DDX39B-216ENST00000462421 AIDAQ96BJ3 306 aa11.18□□□□□ -0.62
DDX39B-216ENST00000462421 GPR101Q96P66 508 aaPredicted RBP11.18□□□□□ -0.62
DDX39B-216ENST00000462421 BEGAINQ9BUH8 593 aa11.18□□□□□ -0.62
DDX39B-216ENST00000462421 ZNF408Q9H9D4 720 aa11.18□□□□□ -0.62
DDX39B-216ENST00000462421 POTECB2RU33 542 aa11.17□□□□□ -0.62
DDX39B-216ENST00000462421 MYO1BO43795 1136 aa11.17□□□□□ -0.62
DDX39B-216ENST00000462421 USP17L8P0C7I0 530 aa11.17□□□□□ -0.62
DDX39B-216ENST00000462421 MS4A1P11836 297 aa11.17□□□□□ -0.62
DDX39B-216ENST00000462421 KIF4BQ2VIQ3 1234 aa11.17□□□□□ -0.62
DDX39B-216ENST00000462421 RSBN1LQ6PCB5 846 aaPredicted RBP11.17□□□□□ -0.62
DDX39B-216ENST00000462421 CDC37L1Q7L3B6 337 aa11.17□□□□□ -0.62
DDX39B-216ENST00000462421 ARHGAP45Q92619 1136 aa11.17□□□□□ -0.62
DDX39B-216ENST00000462421 KLRG1Q96E93 195 aa11.17□□□□□ -0.62
DDX39B-216ENST00000462421 SUCLG2Q96I99 432 aa11.17□□□□□ -0.62
DDX39B-216ENST00000462421 ZBTB12Q9Y330 459 aaPredicted RBP11.17□□□□□ -0.62
DDX39B-216ENST00000462421 ZBED9Q6R2W3 1325 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms