RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 CELF1Q92879 486 aaKnown RBP13.13□□□□□ -0.31
RTF1-202ENST00000462276 TUBGCP6Q96RT7 1819 aa13.13□□□□□ -0.31
RTF1-202ENST00000462276 APBB1O00213 710 aa13.12□□□□□ -0.31
RTF1-202ENST00000462276 IFIT2P09913 472 aaKnown RBP13.12□□□□□ -0.31
RTF1-202ENST00000462276 TFCP2Q12800 502 aa13.12□□□□□ -0.31
RTF1-202ENST00000462276 GPATCH3Q96I76 525 aa13.12□□□□□ -0.31
RTF1-202ENST00000462276 PUS3Q9BZE2 481 aaKnown RBP13.12□□□□□ -0.31
RTF1-202ENST00000462276 LNPKQ9C0E8 428 aa13.12□□□□□ -0.31
RTF1-202ENST00000462276 MINPP1Q9UNW1 487 aa13.12□□□□□ -0.31
RTF1-202ENST00000462276 ATP6V0A2Q9Y487 856 aa13.12□□□□□ -0.31
RTF1-202ENST00000462276 NRXN2Q9P2S2 1712 aa13.12□□□□□ -0.31
RTF1-202ENST00000462276 CHRNDQ07001 517 aa13.11□□□□□ -0.31
RTF1-202ENST00000462276 UBE4AQ14139 1066 aa13.11□□□□□ -0.31
RTF1-202ENST00000462276 PUM3Q15397 648 aaKnown RBP13.11□□□□□ -0.31
RTF1-202ENST00000462276 TNNI3KQ59H18 835 aa13.11□□□□□ -0.31
RTF1-202ENST00000462276 VGLL2Q8N8G2 317 aa13.11□□□□□ -0.31
RTF1-202ENST00000462276 LPIN2Q92539 896 aa13.11□□□□□ -0.31
RTF1-202ENST00000462276 ZNF622Q969S3 477 aaKnown RBP eCLIP13.11□□□□□ -0.317e-10■■□□□ 13.7
RTF1-202ENST00000462276 LEMD3Q9Y2U8 911 aa13.11□□□□□ -0.31
RTF1-202ENST00000462276 FPGT-TNNI3KV9GXZ4 949 aa13.11□□□□□ -0.31
RTF1-202ENST00000462276 IFIT1P09914 478 aaKnown RBP13.1□□□□□ -0.31
RTF1-202ENST00000462276 SOGA3Q5TF21 947 aa13.1□□□□□ -0.31
RTF1-202ENST00000462276 AACSQ86V21 672 aa13.1□□□□□ -0.31
RTF1-202ENST00000462276 TTLL6Q8N841 843 aa13.1□□□□□ -0.31
RTF1-202ENST00000462276 OSBPL3Q9H4L5 887 aa13.1□□□□□ -0.31
RTF1-202ENST00000462276 IL1RAPL2Q9NP60 686 aa13.1□□□□□ -0.31
RTF1-202ENST00000462276 PODXL2Q9NZ53 605 aa13.1□□□□□ -0.31
RTF1-202ENST00000462276 STAP2Q9UGK3 403 aa13.1□□□□□ -0.31
RTF1-202ENST00000462276 AOX1Q06278 1338 aa13.1□□□□□ -0.31
RTF1-202ENST00000462276 CASZ1Q86V15 1759 aa13.09□□□□□ -0.31
RTF1-202ENST00000462276 PPEF1O14829 653 aaPredicted RBP13.09□□□□□ -0.31
RTF1-202ENST00000462276 ERC2O15083 957 aa13.09□□□□□ -0.31
RTF1-202ENST00000462276 SLC5A1P13866 664 aa13.09□□□□□ -0.31
RTF1-202ENST00000462276 ATP2B3Q16720 1220 aa13.09□□□□□ -0.31
RTF1-202ENST00000462276 PELP1Q8IZL8 1130 aaKnown RBP13.09□□□□□ -0.31
RTF1-202ENST00000462276 EAF2Q96CJ1 260 aaPredicted RBP13.09□□□□□ -0.31
RTF1-202ENST00000462276 PIM2Q9P1W9 311 aa13.09□□□□□ -0.31
RTF1-202ENST00000462276 XDHP47989 1333 aa13.09□□□□□ -0.31
RTF1-202ENST00000462276 TTC41PQ6P2S7 1318 aa13.09□□□□□ -0.31
RTF1-202ENST00000462276 A0A1B0GUL7 405 aa13.08□□□□□ -0.32
RTF1-202ENST00000462276 ZBTB22O15209 634 aa13.08□□□□□ -0.32
RTF1-202ENST00000462276 SMARCA5O60264 1052 aaPredicted RBP13.08□□□□□ -0.32
RTF1-202ENST00000462276 DPEP1P16444 411 aa13.08□□□□□ -0.32
RTF1-202ENST00000462276 MX1P20591 662 aa13.08□□□□□ -0.32
RTF1-202ENST00000462276 FGFR2P21802 821 aa13.08□□□□□ -0.32
RTF1-202ENST00000462276 ATP2B4P23634 1241 aa13.08□□□□□ -0.32
RTF1-202ENST00000462276 CHRNA5P30532 468 aa13.08□□□□□ -0.32
RTF1-202ENST00000462276 PRPF40BQ6NWY9 871 aaKnown RBP13.08□□□□□ -0.32
RTF1-202ENST00000462276 ECHDC1Q9NTX5 307 aa13.08□□□□□ -0.32
RTF1-202ENST00000462276 ANKIB1Q9P2G1 1089 aa13.08□□□□□ -0.32
RTF1-202ENST00000462276 LAMB2P55268 1798 aa13.07□□□□□ -0.32
RTF1-202ENST00000462276 GLRX3O76003 335 aaKnown RBP13.07□□□□□ -0.32
RTF1-202ENST00000462276 KCNA3P22001 575 aa13.07□□□□□ -0.32
RTF1-202ENST00000462276 KCNJ4P48050 445 aa13.07□□□□□ -0.32
RTF1-202ENST00000462276 PDE1AP54750 535 aa13.07□□□□□ -0.32
RTF1-202ENST00000462276 CCDC158Q5M9N0 1113 aa13.07□□□□□ -0.32
RTF1-202ENST00000462276 GORABQ5T7V8 394 aa13.07□□□□□ -0.32
RTF1-202ENST00000462276 C15orf52Q6ZUT6 534 aaKnown RBP13.07□□□□□ -0.32
RTF1-202ENST00000462276 PLEKHM2Q8IWE5 1019 aa13.07□□□□□ -0.32
RTF1-202ENST00000462276 C7orf43Q8WVR3 580 aa13.07□□□□□ -0.32
RTF1-202ENST00000462276 ZNF512BQ96KM6 892 aaPredicted RBP13.07□□□□□ -0.32
RTF1-202ENST00000462276 NEUROD6Q96NK8 337 aa13.07□□□□□ -0.32
RTF1-202ENST00000462276 DDX60Q8IY21 1712 aaKnown RBP13.07□□□□□ -0.32
RTF1-202ENST00000462276 A0A0G2JLW4 131 aa13.06□□□□□ -0.32
RTF1-202ENST00000462276 PDE4AP27815 886 aa13.06□□□□□ -0.32
RTF1-202ENST00000462276 TIMM10P62072 90 aa13.06□□□□□ -0.32
RTF1-202ENST00000462276 CAVIN4Q5BKX8 364 aa13.06□□□□□ -0.32
RTF1-202ENST00000462276 DALRD3Q5D0E6 543 aaKnown RBP13.06□□□□□ -0.32
RTF1-202ENST00000462276 TICAM2Q86XR7 235 aa13.06□□□□□ -0.32
RTF1-202ENST00000462276 C16orf71Q8IYS4 520 aaPredicted RBP13.06□□□□□ -0.32
RTF1-202ENST00000462276 RTKN2Q8IZC4 609 aa13.06□□□□□ -0.32
RTF1-202ENST00000462276 MPNDQ8N594 471 aa13.06□□□□□ -0.32
RTF1-202ENST00000462276 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.06□□□□□ -0.32
RTF1-202ENST00000462276 GNL3LQ9NVN8 582 aaKnown RBP13.06□□□□□ -0.32
RTF1-202ENST00000462276 PPP1R1BQ9UD71 204 aaPredicted RBP13.06□□□□□ -0.32
RTF1-202ENST00000462276 GGA1Q9UJY5 639 aa13.06□□□□□ -0.32
RTF1-202ENST00000462276 NSFL1CQ9UNZ2 370 aaKnown RBP13.06□□□□□ -0.32
RTF1-202ENST00000462276 ZNF804BA4D1E1 1349 aa13.06□□□□□ -0.32
RTF1-202ENST00000462276 SALL3Q9BXA9 1300 aa13.06□□□□□ -0.32
RTF1-202ENST00000462276 UQCRFS1P1P0C7P4 283 aa13.05□□□□□ -0.32
RTF1-202ENST00000462276 ATP5JP18859 108 aa13.05□□□□□ -0.32
RTF1-202ENST00000462276 SUPT20HQ8NEM7 779 aa13.05□□□□□ -0.32
RTF1-202ENST00000462276 HELBQ8NG08 1087 aaPredicted RBP13.05□□□□□ -0.32
RTF1-202ENST00000462276 XAGE2Q96GT9 111 aa13.05□□□□□ -0.32
RTF1-202ENST00000462276 CCDC8Q9H0W5 538 aaPredicted RBP13.05□□□□□ -0.32
RTF1-202ENST00000462276 VPS33BQ9H267 617 aa13.05□□□□□ -0.32
RTF1-202ENST00000462276 DBNLQ9UJU6 430 aaKnown RBP13.05□□□□□ -0.32
RTF1-202ENST00000462276 TAF5LO75529 589 aa13.04□□□□□ -0.32
RTF1-202ENST00000462276 RGS3P49796 1198 aa13.04□□□□□ -0.32
RTF1-202ENST00000462276 GPSM2P81274 684 aa13.04□□□□□ -0.32
RTF1-202ENST00000462276 CCDC93Q567U6 631 aa13.04□□□□□ -0.32
RTF1-202ENST00000462276 BMP2KLQ5H9B9 411 aa13.04□□□□□ -0.32
RTF1-202ENST00000462276 DPP8Q6V1X1 898 aaPredicted RBP13.04□□□□□ -0.32
RTF1-202ENST00000462276 EYA3Q99504 573 aa13.04□□□□□ -0.32
RTF1-202ENST00000462276 DBNDD2Q9BQY9 259 aa13.04□□□□□ -0.32
RTF1-202ENST00000462276 RTFDC1Q9BY42 306 aaPredicted RBP13.04□□□□□ -0.32
RTF1-202ENST00000462276 MYH3P11055 1940 aa13.03□□□□□ -0.32
RTF1-202ENST00000462276 SEMA3EO15041 775 aa13.03□□□□□ -0.32
RTF1-202ENST00000462276 IGSF3O75054 1194 aa13.03□□□□□ -0.32
RTF1-202ENST00000462276 TBC1D16Q8TBP0 767 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms