RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-222	ENST00000462212	WASHC4	Q2M389	1173 aa		10.56	□□□□□ -0.72
ITSN1-222	ENST00000462212	SMC1B	Q8NDV3	1235 aa		10.56	□□□□□ -0.72
ITSN1-222	ENST00000462212	KAZALD1	Q96I82	304 aa		10.56	□□□□□ -0.72
ITSN1-222	ENST00000462212	EYA3	Q99504	573 aa		10.56	□□□□□ -0.72
ITSN1-222	ENST00000462212	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.56	□□□□□ -0.72
ITSN1-222	ENST00000462212	MINPP1	Q9UNW1	487 aa		10.56	□□□□□ -0.72
ITSN1-222	ENST00000462212	SPEF2	Q9C093	1822 aa		10.56	□□□□□ -0.72
ITSN1-222	ENST00000462212	ADAMTSL1	Q8N6G6	1762 aa		10.55	□□□□□ -0.72
ITSN1-222	ENST00000462212	C6orf229	H3BNL8	230 aa		10.55	□□□□□ -0.72
ITSN1-222	ENST00000462212	UFL1	O94874	794 aa		10.55	□□□□□ -0.72
ITSN1-222	ENST00000462212	IGHMBP2	P38935	993 aa	Known RBP	10.55	□□□□□ -0.72
ITSN1-222	ENST00000462212	SCNN1D	P51172	638 aa		10.55	□□□□□ -0.72
ITSN1-222	ENST00000462212	LMBR1L	Q6UX01	489 aa		10.55	□□□□□ -0.72
ITSN1-222	ENST00000462212	ARHGAP45	Q92619	1136 aa		10.55	□□□□□ -0.72
ITSN1-222	ENST00000462212	SUCLG2	Q96I99	432 aa		10.55	□□□□□ -0.72
ITSN1-222	ENST00000462212	USP44	Q9H0E7	712 aa		10.55	□□□□□ -0.72
ITSN1-222	ENST00000462212	ANKIB1	Q9P2G1	1089 aa		10.55	□□□□□ -0.72
ITSN1-222	ENST00000462212	HACL1	Q9UJ83	578 aa		10.55	□□□□□ -0.72
ITSN1-222	ENST00000462212	GGA1	Q9UJY5	639 aa		10.55	□□□□□ -0.72
ITSN1-222	ENST00000462212	NOB1	Q9ULX3	412 aa	Known RBP	10.55	□□□□□ -0.72
ITSN1-222	ENST00000462212	KIF16B	Q96L93	1317 aa		10.55	□□□□□ -0.72
ITSN1-222	ENST00000462212	ANKRD18B	A2A2Z9	1011 aa		10.54	□□□□□ -0.72
ITSN1-222	ENST00000462212	ATP2B4	P23634	1241 aa		10.54	□□□□□ -0.72
ITSN1-222	ENST00000462212	EPHX2	P34913	555 aa		10.54	□□□□□ -0.72
ITSN1-222	ENST00000462212	IFIT5	Q13325	482 aa	Known RBP	10.54	□□□□□ -0.72
ITSN1-222	ENST00000462212	RABL6	Q3YEC7	729 aa	Predicted RBP	10.54	□□□□□ -0.72
ITSN1-222	ENST00000462212	CIAPIN1	Q6FI81	312 aa		10.54	□□□□□ -0.72
ITSN1-222	ENST00000462212	PPP4R3CP	Q6ZMV5	832 aa		10.54	□□□□□ -0.72
ITSN1-222	ENST00000462212	GPR101	Q96P66	508 aa	Predicted RBP	10.54	□□□□□ -0.72
ITSN1-222	ENST00000462212	API5	Q9BZZ5	524 aa	Known RBP	10.54	□□□□□ -0.72
ITSN1-222	ENST00000462212	SCN9A	Q15858	1988 aa		10.54	□□□□□ -0.72
ITSN1-222	ENST00000462212	RIMBP2	O15034	1052 aa		10.53	□□□□□ -0.72
ITSN1-222	ENST00000462212	ECE2	O60344	883 aa		10.53	□□□□□ -0.72
ITSN1-222	ENST00000462212	POTEI	P0CG38	1075 aa		10.53	□□□□□ -0.72
ITSN1-222	ENST00000462212	POTEJ	P0CG39	1038 aa		10.53	□□□□□ -0.72
ITSN1-222	ENST00000462212	CCT4	P50991	539 aa	Known RBP	10.53	□□□□□ -0.72
ITSN1-222	ENST00000462212	TNIP1	Q15025	636 aa		10.53	□□□□□ -0.72
ITSN1-222	ENST00000462212	ANKRD44	Q8N8A2	993 aa		10.53	□□□□□ -0.72
ITSN1-222	ENST00000462212	MPHOSPH8	Q99549	860 aa		10.53	□□□□□ -0.72
ITSN1-222	ENST00000462212	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.53	□□□□□ -0.72
ITSN1-222	ENST00000462212	DBNDD1	Q9H9R9	158 aa		10.53	□□□□□ -0.72
ITSN1-222	ENST00000462212	LEMD3	Q9Y2U8	911 aa		10.53	□□□□□ -0.72
ITSN1-222	ENST00000462212	GJA3	Q9Y6H8	435 aa		10.53	□□□□□ -0.72
ITSN1-222	ENST00000462212	MED23	Q9ULK4	1368 aa		10.52	□□□□□ -0.72
ITSN1-222	ENST00000462212		A0A1B0GUL6	1792 aa		10.52	□□□□□ -0.72
ITSN1-222	ENST00000462212	PSME4	Q14997	1843 aa		10.52	□□□□□ -0.73
ITSN1-222	ENST00000462212	WTIP	A6NIX2	430 aa	Predicted RBP	10.52	□□□□□ -0.73
ITSN1-222	ENST00000462212	RAD17	O75943	681 aa		10.52	□□□□□ -0.73
ITSN1-222	ENST00000462212	CHRND	Q07001	517 aa		10.52	□□□□□ -0.73
ITSN1-222	ENST00000462212	CCDC57	Q2TAC2	916 aa		10.52	□□□□□ -0.73
ITSN1-222	ENST00000462212	CHADL	Q6NUI6	762 aa		10.52	□□□□□ -0.73
ITSN1-222	ENST00000462212	PNMA8A	Q86V59	439 aa	Predicted RBP	10.52	□□□□□ -0.73
ITSN1-222	ENST00000462212	LDHD	Q86WU2	507 aa		10.52	□□□□□ -0.73
ITSN1-222	ENST00000462212	ANKRD2	Q9GZV1	360 aa		10.52	□□□□□ -0.73
ITSN1-222	ENST00000462212	BICC1	Q9H694	974 aa	Known RBP	10.52	□□□□□ -0.73
ITSN1-222	ENST00000462212	GPRC5D	Q9NZD1	345 aa		10.52	□□□□□ -0.73
ITSN1-222	ENST00000462212	CHMP3	Q9Y3E7	222 aa		10.52	□□□□□ -0.73
ITSN1-222	ENST00000462212	ZNF609	O15014	1411 aa		10.51	□□□□□ -0.73
ITSN1-222	ENST00000462212	PSMD14	O00487	310 aa		10.51	□□□□□ -0.73
ITSN1-222	ENST00000462212	BCAR3	O75815	825 aa		10.51	□□□□□ -0.73
ITSN1-222	ENST00000462212	LMOD1	P29536	600 aa	Predicted RBP	10.51	□□□□□ -0.73
ITSN1-222	ENST00000462212	EPS15	P42566	896 aa		10.51	□□□□□ -0.73
ITSN1-222	ENST00000462212	GMPS	P49915	693 aa	Predicted RBP	10.51	□□□□□ -0.73
ITSN1-222	ENST00000462212	APLP1	P51693	650 aa		10.51	□□□□□ -0.73
ITSN1-222	ENST00000462212	DOK7	Q18PE1	504 aa		10.51	□□□□□ -0.73
ITSN1-222	ENST00000462212	INTS3	Q68E01	1043 aa	Known RBP	10.51	□□□□□ -0.73
ITSN1-222	ENST00000462212	PODN	Q7Z5L7	613 aa		10.51	□□□□□ -0.73
ITSN1-222	ENST00000462212	KCNQ5	Q9NR82	932 aa		10.51	□□□□□ -0.73
ITSN1-222	ENST00000462212	ZNF804B	A4D1E1	1349 aa		10.51	□□□□□ -0.73
ITSN1-222	ENST00000462212	IRS2	Q9Y4H2	1338 aa		10.51	□□□□□ -0.73
ITSN1-222	ENST00000462212	IPO8	O15397	1037 aa	Known RBP	10.5	□□□□□ -0.73
ITSN1-222	ENST00000462212	VIL1	P09327	827 aa	Known RBP	10.5	□□□□□ -0.73
ITSN1-222	ENST00000462212	TRIM27	P14373	513 aa		10.5	□□□□□ -0.73
ITSN1-222	ENST00000462212	EAPP	Q56P03	285 aa	Predicted RBP	10.5	□□□□□ -0.73
ITSN1-222	ENST00000462212	ATF7IP	Q6VMQ6	1270 aa		10.5	□□□□□ -0.73
ITSN1-222	ENST00000462212	LDHAL6A	Q6ZMR3	332 aa		10.5	□□□□□ -0.73
ITSN1-222	ENST00000462212	C15orf52	Q6ZUT6	534 aa	Known RBP	10.5	□□□□□ -0.73
ITSN1-222	ENST00000462212	USP50	Q70EL3	339 aa	Predicted RBP	10.5	□□□□□ -0.73
ITSN1-222	ENST00000462212	DPF2	Q92785	391 aa		10.5	□□□□□ -0.73
ITSN1-222	ENST00000462212	ZNF594	Q96JF6	807 aa	Predicted RBP	10.5	□□□□□ -0.73
ITSN1-222	ENST00000462212	ZNF646	O15015	1829 aa	Predicted RBP	10.49	□□□□□ -0.73
ITSN1-222	ENST00000462212	ITGBL1	O95965	494 aa	Predicted RBP	10.49	□□□□□ -0.73
ITSN1-222	ENST00000462212	RPS12	P25398	132 aa	Known RBP	10.49	□□□□□ -0.73
ITSN1-222	ENST00000462212	KLRK1	P26718	216 aa		10.49	□□□□□ -0.73
ITSN1-222	ENST00000462212	TXNRD3	Q86VQ6	643 aa		10.49	□□□□□ -0.73
ITSN1-222	ENST00000462212	COA1	Q9GZY4	146 aa		10.49	□□□□□ -0.73
ITSN1-222	ENST00000462212	ADARB2	Q9NS39	739 aa	Known RBP	10.49	□□□□□ -0.73
ITSN1-222	ENST00000462212	ZBTB12	Q9Y330	459 aa	Predicted RBP	10.49	□□□□□ -0.73
ITSN1-222	ENST00000462212	RIPOR2	Q9Y4F9	1068 aa		10.49	□□□□□ -0.73
ITSN1-222	ENST00000462212	PASK	Q96RG2	1323 aa		10.49	□□□□□ -0.73
ITSN1-222	ENST00000462212	CEP350	Q5VT06	3117 aa		10.49	□□□□□ -0.73
ITSN1-222	ENST00000462212	SNAP23	O00161	211 aa		10.48	□□□□□ -0.73
ITSN1-222	ENST00000462212	TAF5L	O75529	589 aa		10.48	□□□□□ -0.73
ITSN1-222	ENST00000462212	UBTFL1	P0CB47	393 aa	Predicted RBP	10.48	□□□□□ -0.73
ITSN1-222	ENST00000462212	RFX5	P48382	616 aa	Predicted RBP	10.48	□□□□□ -0.73
ITSN1-222	ENST00000462212	TAF7L	Q5H9L4	462 aa		10.48	□□□□□ -0.73
ITSN1-222	ENST00000462212	GML	Q99445	158 aa		10.48	□□□□□ -0.73
ITSN1-222	ENST00000462212	MEIS3	Q99687	375 aa		10.48	□□□□□ -0.73
ITSN1-222	ENST00000462212	PUS3	Q9BZE2	481 aa	Known RBP	10.48	□□□□□ -0.73
ITSN1-222	ENST00000462212	CNNM1	Q9NRU3	951 aa		10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms