RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 ZBTB1Q9Y2K1 713 aa7.99□□□□□ -1.13
SMARCC1-204ENST00000462198 DPYSL4O14531 572 aa7.98□□□□□ -1.13
SMARCC1-204ENST00000462198 SCNN1DP51172 638 aa7.98□□□□□ -1.13
SMARCC1-204ENST00000462198 KIF23Q02241 960 aaPredicted RBP7.98□□□□□ -1.13
SMARCC1-204ENST00000462198 AMHR2Q16671 573 aa7.98□□□□□ -1.13
SMARCC1-204ENST00000462198 ZNF530Q6P9A1 599 aaPredicted RBP7.98□□□□□ -1.13
SMARCC1-204ENST00000462198 ARID3AQ99856 593 aa7.98□□□□□ -1.13
SMARCC1-204ENST00000462198 CARD14Q9BXL6 1004 aa7.98□□□□□ -1.13
SMARCC1-204ENST00000462198 GLIS2Q9BZE0 524 aaPredicted RBP7.98□□□□□ -1.13
SMARCC1-204ENST00000462198 GPHNQ9NQX3 736 aaPredicted RBP7.98□□□□□ -1.13
SMARCC1-204ENST00000462198 EMILIN3Q9NT22 766 aa7.98□□□□□ -1.13
SMARCC1-204ENST00000462198 A0A0C4DFX4 3053 aa7.97□□□□□ -1.13
SMARCC1-204ENST00000462198 A0A087WZG4 1122 aa7.97□□□□□ -1.13
SMARCC1-204ENST00000462198 PTPN5P54829 565 aa7.97□□□□□ -1.13
SMARCC1-204ENST00000462198 PKN2Q16513 984 aaKnown RBP7.97□□□□□ -1.13
SMARCC1-204ENST00000462198 SETDB2Q96T68 719 aa7.97□□□□□ -1.13
SMARCC1-204ENST00000462198 KNSTRNQ9Y448 316 aa7.97□□□□□ -1.13
SMARCC1-204ENST00000462198 ARFGEF2Q9Y6D5 1785 aa7.97□□□□□ -1.13
SMARCC1-204ENST00000462198 NPR1P16066 1061 aa7.96□□□□□ -1.14
SMARCC1-204ENST00000462198 EIF5P55010 431 aaKnown RBP7.96□□□□□ -1.14
SMARCC1-204ENST00000462198 HUNKP57058 714 aa7.96□□□□□ -1.14
SMARCC1-204ENST00000462198 ST5P78524 1137 aa7.96□□□□□ -1.14
SMARCC1-204ENST00000462198 AMOTQ4VCS5 1084 aa7.96□□□□□ -1.14
SMARCC1-204ENST00000462198 C1orf141Q5JVX7 400 aa7.96□□□□□ -1.14
SMARCC1-204ENST00000462198 CNBD1Q8NA66 436 aa7.96□□□□□ -1.14
SMARCC1-204ENST00000462198 GOPCQ9HD26 462 aa7.96□□□□□ -1.14
SMARCC1-204ENST00000462198 PGAP2Q9UHJ9 254 aa7.96□□□□□ -1.14
SMARCC1-204ENST00000462198 TBC1D2BQ9UPU7 963 aa7.96□□□□□ -1.14
SMARCC1-204ENST00000462198 FAM155AB1AL88 458 aaPredicted RBP7.95□□□□□ -1.14
SMARCC1-204ENST00000462198 APBB1O00213 710 aa7.95□□□□□ -1.14
SMARCC1-204ENST00000462198 MAP2K5Q13163 448 aa7.95□□□□□ -1.14
SMARCC1-204ENST00000462198 DDX10Q13206 875 aaKnown RBP7.95□□□□□ -1.14
SMARCC1-204ENST00000462198 SLC39A6Q13433 755 aa7.95□□□□□ -1.14
SMARCC1-204ENST00000462198 EIF4A2Q14240 407 aaKnown RBP7.95□□□□□ -1.14
SMARCC1-204ENST00000462198 PPP4R3BQ5MIZ7 849 aa7.95□□□□□ -1.14
SMARCC1-204ENST00000462198 RGMBQ6NW40 437 aa7.95□□□□□ -1.14
SMARCC1-204ENST00000462198 NPM2Q86SE8 214 aaKnown RBP7.95□□□□□ -1.14
SMARCC1-204ENST00000462198 PARP9Q8IXQ6 854 aa7.95□□□□□ -1.14
SMARCC1-204ENST00000462198 CCDC102AQ96A19 550 aa7.95□□□□□ -1.14
SMARCC1-204ENST00000462198 CSRNP1Q96S65 589 aa7.95□□□□□ -1.14
SMARCC1-204ENST00000462198 ADARB2Q9NS39 739 aaKnown RBP7.95□□□□□ -1.14
SMARCC1-204ENST00000462198 HDAC9Q9UKV0 1011 aa7.95□□□□□ -1.14
SMARCC1-204ENST00000462198 TRIOBPQ9H2D6 2365 aa7.95□□□□□ -1.14
SMARCC1-204ENST00000462198 POLR2AP24928 1970 aaKnown RBP7.94□□□□□ -1.14
SMARCC1-204ENST00000462198 THSD4Q6ZMP0 1018 aa7.94□□□□□ -1.14
SMARCC1-204ENST00000462198 CDC37L1Q7L3B6 337 aa7.94□□□□□ -1.14
SMARCC1-204ENST00000462198 GPRC5DQ9NZD1 345 aa7.94□□□□□ -1.14
SMARCC1-204ENST00000462198 POLKQ9UBT6 870 aa7.94□□□□□ -1.14
SMARCC1-204ENST00000462198 VPS9D1Q9Y2B5 631 aa7.94□□□□□ -1.14
SMARCC1-204ENST00000462198 CEP290O15078 2479 aa7.93□□□□□ -1.14
SMARCC1-204ENST00000462198 KLRG2A4D1S0 409 aaPredicted RBP7.93□□□□□ -1.14
SMARCC1-204ENST00000462198 A6NJR5 290 aa7.93□□□□□ -1.14
SMARCC1-204ENST00000462198 STARD3NLO95772 234 aa7.93□□□□□ -1.14
SMARCC1-204ENST00000462198 ALDH1B1P30837 517 aa7.93□□□□□ -1.14
SMARCC1-204ENST00000462198 ZNF157P51786 506 aaPredicted RBP7.93□□□□□ -1.14
SMARCC1-204ENST00000462198 CNGB1Q14028 1251 aaPredicted RBP7.93□□□□□ -1.14
SMARCC1-204ENST00000462198 CC2D1BQ5T0F9 858 aaKnown RBP7.93□□□□□ -1.14
SMARCC1-204ENST00000462198 Q6ZNB5 142 aa7.93□□□□□ -1.14
SMARCC1-204ENST00000462198 USP48Q86UV5 1035 aa7.93□□□□□ -1.14
SMARCC1-204ENST00000462198 LARGE2Q8N3Y3 721 aa7.93□□□□□ -1.14
SMARCC1-204ENST00000462198 TMC2Q8TDI7 906 aa7.93□□□□□ -1.14
SMARCC1-204ENST00000462198 PTCD2Q8WV60 388 aaKnown RBP7.93□□□□□ -1.14
SMARCC1-204ENST00000462198 PSMD1Q99460 953 aa7.93□□□□□ -1.14
SMARCC1-204ENST00000462198 LGR6Q9HBX8 967 aa7.93□□□□□ -1.14
SMARCC1-204ENST00000462198 ZNF330Q9Y3S2 320 aaPredicted RBP7.93□□□□□ -1.14
SMARCC1-204ENST00000462198 SZT2Q5T011 3432 aa7.93□□□□□ -1.14
SMARCC1-204ENST00000462198 IRF6O14896 467 aa7.92□□□□□ -1.14
SMARCC1-204ENST00000462198 PER1O15534 1290 aaPredicted RBP7.92□□□□□ -1.14
SMARCC1-204ENST00000462198 HIRAP54198 1017 aaPredicted RBP7.92□□□□□ -1.14
SMARCC1-204ENST00000462198 FBXO46Q6PJ61 603 aaPredicted RBP7.92□□□□□ -1.14
SMARCC1-204ENST00000462198 DLK2Q6UY11 383 aa7.92□□□□□ -1.14
SMARCC1-204ENST00000462198 MORC1Q86VD1 984 aa7.92□□□□□ -1.14
SMARCC1-204ENST00000462198 NBPF5PQ86XG9 351 aaPredicted RBP7.92□□□□□ -1.14
SMARCC1-204ENST00000462198 C2orf69Q8N8R5 385 aa7.92□□□□□ -1.14
SMARCC1-204ENST00000462198 SLC52A2Q9HAB3 445 aa7.92□□□□□ -1.14
SMARCC1-204ENST00000462198 SCN11AQ9UI33 1791 aa7.92□□□□□ -1.14
SMARCC1-204ENST00000462198 TNNT2P45379 298 aaPredicted RBP7.91□□□□□ -1.14
SMARCC1-204ENST00000462198 ZNF296Q8WUU4 475 aaPredicted RBP7.91□□□□□ -1.14
SMARCC1-204ENST00000462198 KCNK17Q96T54 332 aa7.91□□□□□ -1.14
SMARCC1-204ENST00000462198 COL4A5P29400 1685 aa7.91□□□□□ -1.14
SMARCC1-204ENST00000462198 KIAA0100Q14667 2235 aaKnown RBP7.91□□□□□ -1.14
SMARCC1-204ENST00000462198 NPC1L1Q9UHC9 1359 aa7.9□□□□□ -1.14
SMARCC1-204ENST00000462198 CAMTA2O94983 1202 aa7.9□□□□□ -1.14
SMARCC1-204ENST00000462198 TBC1D8O95759 1140 aa7.9□□□□□ -1.14
SMARCC1-204ENST00000462198 GMPSP49915 693 aaPredicted RBP7.9□□□□□ -1.14
SMARCC1-204ENST00000462198 CXCL9Q07325 125 aa7.9□□□□□ -1.14
SMARCC1-204ENST00000462198 DSG2Q14126 1118 aa7.9□□□□□ -1.14
SMARCC1-204ENST00000462198 CC2D2BQ6DHV5 1058 aa7.9□□□□□ -1.14
SMARCC1-204ENST00000462198 TPTE2Q6XPS3 522 aa7.9□□□□□ -1.14
SMARCC1-204ENST00000462198 NIM1KQ8IY84 436 aa7.9□□□□□ -1.14
SMARCC1-204ENST00000462198 SLC4A5Q9BY07 1137 aa7.9□□□□□ -1.14
SMARCC1-204ENST00000462198 GBA2Q9HCG7 927 aaPredicted RBP7.9□□□□□ -1.14
SMARCC1-204ENST00000462198 BCORQ6W2J9 1755 aa7.89□□□□□ -1.15
SMARCC1-204ENST00000462198 IL6STP40189 918 aaPredicted RBP7.89□□□□□ -1.15
SMARCC1-204ENST00000462198 MKI67P46013 3256 aaKnown RBP7.89□□□□□ -1.15
SMARCC1-204ENST00000462198 FAM177BA6PVY3 158 aa7.88□□□□□ -1.15
SMARCC1-204ENST00000462198 RNMTO43148 476 aaKnown RBP7.88□□□□□ -1.15
SMARCC1-204ENST00000462198 A1BGP04217 495 aa7.88□□□□□ -1.15
SMARCC1-204ENST00000462198 SLC10A3P09131 477 aa7.88□□□□□ -1.15
SMARCC1-204ENST00000462198 PDIA4P13667 645 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms