RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 ATP6V0A2Q9Y487 856 aa18.81■□□□□ 0.6
TMEM39A-203ENST00000461654 PNMA6EA0A0J9YXQ4 647 aa18.8■□□□□ 0.6
TMEM39A-203ENST00000461654 DDNO94850 711 aaPredicted RBP18.8■□□□□ 0.6
TMEM39A-203ENST00000461654 HCLS1P14317 486 aaPredicted RBP18.8■□□□□ 0.6
TMEM39A-203ENST00000461654 CASP7P55210 303 aa18.8■□□□□ 0.6
TMEM39A-203ENST00000461654 RTL5Q5HYW3 569 aaPredicted RBP18.8■□□□□ 0.6
TMEM39A-203ENST00000461654 JARID2Q92833 1246 aaPredicted RBP18.8■□□□□ 0.6
TMEM39A-203ENST00000461654 CDHR2Q9BYE9 1310 aa18.79■□□□□ 0.6
TMEM39A-203ENST00000461654 FZD9O00144 591 aa18.79■□□□□ 0.6
TMEM39A-203ENST00000461654 POLA2Q14181 598 aa18.79■□□□□ 0.6
TMEM39A-203ENST00000461654 HSP90AB4PQ58FF6 505 aa18.79■□□□□ 0.6
TMEM39A-203ENST00000461654 ANKRD45Q5TZF3 282 aa18.79■□□□□ 0.6
TMEM39A-203ENST00000461654 SP8Q8IXZ3 490 aa18.79■□□□□ 0.6
TMEM39A-203ENST00000461654 L3MBTL3Q96JM7 780 aaPredicted RBP18.79■□□□□ 0.6
TMEM39A-203ENST00000461654 VPS33BQ9H267 617 aa18.79■□□□□ 0.6
TMEM39A-203ENST00000461654 NUCB1Q02818 461 aa18.78■□□□□ 0.6
TMEM39A-203ENST00000461654 SF3B3Q15393 1217 aaKnown RBP18.78■□□□□ 0.6
TMEM39A-203ENST00000461654 FAM89AQ96GI7 184 aa18.78■□□□□ 0.6
TMEM39A-203ENST00000461654 TMX4Q9H1E5 349 aaPredicted RBP18.78■□□□□ 0.6
TMEM39A-203ENST00000461654 SURF6O75683 361 aaKnown RBP18.77■□□□□ 0.6
TMEM39A-203ENST00000461654 RABL6Q3YEC7 729 aaPredicted RBP18.77■□□□□ 0.6
TMEM39A-203ENST00000461654 DDX46Q7L014 1031 aaKnown RBP18.77■□□□□ 0.6
TMEM39A-203ENST00000461654 TMC4Q7Z404 712 aa18.77■□□□□ 0.6
TMEM39A-203ENST00000461654 CHD1LQ86WJ1 897 aa18.77■□□□□ 0.6
TMEM39A-203ENST00000461654 JDP2Q8WYK2 163 aa18.77■□□□□ 0.6
TMEM39A-203ENST00000461654 KAZALD1Q96I82 304 aa18.77■□□□□ 0.6
TMEM39A-203ENST00000461654 RTFDC1Q9BY42 306 aaPredicted RBP18.77■□□□□ 0.6
TMEM39A-203ENST00000461654 CHMP3Q9Y3E7 222 aa18.77■□□□□ 0.6
TMEM39A-203ENST00000461654 IQCA1LA6NCM1 817 aa18.76■□□□□ 0.59
TMEM39A-203ENST00000461654 IRS4O14654 1257 aaPredicted RBP18.76■□□□□ 0.59
TMEM39A-203ENST00000461654 RAB11FIP3O75154 756 aa18.76■□□□□ 0.59
TMEM39A-203ENST00000461654 OS9Q13438 667 aaPredicted RBP18.76■□□□□ 0.59
TMEM39A-203ENST00000461654 GRAPQ13588 217 aa18.76■□□□□ 0.59
TMEM39A-203ENST00000461654 EPHA10Q5JZY3 1008 aa18.76■□□□□ 0.59
TMEM39A-203ENST00000461654 LMBR1LQ6UX01 489 aa18.76■□□□□ 0.59
TMEM39A-203ENST00000461654 GRAPLQ8TC17 118 aaPredicted RBP18.76■□□□□ 0.59
TMEM39A-203ENST00000461654 PLA2G12BQ9BX93 195 aa18.76■□□□□ 0.59
TMEM39A-203ENST00000461654 RGS3P49796 1198 aa18.75■□□□□ 0.59
TMEM39A-203ENST00000461654 DNAJC5GQ8N7S2 189 aa18.75■□□□□ 0.59
TMEM39A-203ENST00000461654 EXOC6BQ9Y2D4 811 aa18.75■□□□□ 0.59
TMEM39A-203ENST00000461654 ZNF541Q9H0D2 1346 aa18.74■□□□□ 0.59
TMEM39A-203ENST00000461654 APBB1O00213 710 aa18.74■□□□□ 0.59
TMEM39A-203ENST00000461654 PDE8AO60658 829 aa18.74■□□□□ 0.59
TMEM39A-203ENST00000461654 FOXO4P98177 505 aa18.74■□□□□ 0.59
TMEM39A-203ENST00000461654 ERC1Q8IUD2 1116 aa18.74■□□□□ 0.59
TMEM39A-203ENST00000461654 GPC2Q8N158 579 aa18.74■□□□□ 0.59
TMEM39A-203ENST00000461654 SUPT20HQ8NEM7 779 aa18.74■□□□□ 0.59
TMEM39A-203ENST00000461654 LAMB2P55268 1798 aa18.73■□□□□ 0.59
TMEM39A-203ENST00000461654 G3BP1Q13283 466 aaKnown RBP eCLIP18.73■□□□□ 0.59
TMEM39A-203ENST00000461654 LRRCC1Q9C099 1032 aa18.73■□□□□ 0.59
TMEM39A-203ENST00000461654 LNPKQ9C0E8 428 aa18.73■□□□□ 0.59
TMEM39A-203ENST00000461654 NOP58Q9Y2X3 529 aaKnown RBP18.73■□□□□ 0.59
TMEM39A-203ENST00000461654 CCDC57Q2TAC2 916 aa18.72■□□□□ 0.59
TMEM39A-203ENST00000461654 SLC51AQ86UW1 340 aa18.72■□□□□ 0.59
TMEM39A-203ENST00000461654 LARGE2Q8N3Y3 721 aa18.72■□□□□ 0.59
TMEM39A-203ENST00000461654 MPNDQ8N594 471 aa18.72■□□□□ 0.59
TMEM39A-203ENST00000461654 TAF1DQ9H5J8 278 aaPredicted RBP18.72■□□□□ 0.59
TMEM39A-203ENST00000461654 DDX60Q8IY21 1712 aaKnown RBP18.71■□□□□ 0.59
TMEM39A-203ENST00000461654 CTSWP56202 376 aa18.71■□□□□ 0.59
TMEM39A-203ENST00000461654 EIF6P56537 245 aaKnown RBP18.71■□□□□ 0.59
TMEM39A-203ENST00000461654 DPP8Q6V1X1 898 aaPredicted RBP18.71■□□□□ 0.59
TMEM39A-203ENST00000461654 KIF1BPQ96EK5 621 aa18.71■□□□□ 0.59
TMEM39A-203ENST00000461654 SCN4AP35499 1836 aa18.71■□□□□ 0.59
TMEM39A-203ENST00000461654 COL4A5P29400 1685 aa18.7■□□□□ 0.58
TMEM39A-203ENST00000461654 IFIT5Q13325 482 aaKnown RBP18.7■□□□□ 0.58
TMEM39A-203ENST00000461654 TAF7LQ5H9L4 462 aa18.7■□□□□ 0.58
TMEM39A-203ENST00000461654 CHADLQ6NUI6 762 aa18.7■□□□□ 0.58
TMEM39A-203ENST00000461654 COPRSQ9NQ92 184 aa18.7■□□□□ 0.58
TMEM39A-203ENST00000461654 HACL1Q9UJ83 578 aa18.7■□□□□ 0.58
TMEM39A-203ENST00000461654 PPIP5K2O43314 1243 aa18.69■□□□□ 0.58
TMEM39A-203ENST00000461654 CSF1RP07333 972 aa18.69■□□□□ 0.58
TMEM39A-203ENST00000461654 NIM1KQ8IY84 436 aa18.69■□□□□ 0.58
TMEM39A-203ENST00000461654 CELF1Q92879 486 aaKnown RBP18.69■□□□□ 0.58
TMEM39A-203ENST00000461654 BCL11AQ9H165 835 aa18.69■□□□□ 0.58
TMEM39A-203ENST00000461654 RPS8P62241 208 aaKnown RBP18.68■□□□□ 0.58
TMEM39A-203ENST00000461654 KIAA2012Q0VF49 1180 aa18.68■□□□□ 0.58
TMEM39A-203ENST00000461654 PNMA8AQ86V59 439 aaPredicted RBP18.68■□□□□ 0.58
TMEM39A-203ENST00000461654 LDHDQ86WU2 507 aa18.68■□□□□ 0.58
TMEM39A-203ENST00000461654 TTLL11Q8NHH1 800 aa18.68■□□□□ 0.58
TMEM39A-203ENST00000461654 ZNRF3Q9ULT6 936 aa18.68■□□□□ 0.58
TMEM39A-203ENST00000461654 PA2G4Q9UQ80 394 aaKnown RBP18.68■□□□□ 0.58
TMEM39A-203ENST00000461654 ANKRD18BA2A2Z9 1011 aa18.67■□□□□ 0.58
TMEM39A-203ENST00000461654 EPHX2P34913 555 aa18.67■□□□□ 0.58
TMEM39A-203ENST00000461654 RFX5P48382 616 aaPredicted RBP18.67■□□□□ 0.58
TMEM39A-203ENST00000461654 AOC3Q16853 763 aa18.67■□□□□ 0.58
TMEM39A-203ENST00000461654 CCDC152Q4G0S7 254 aa18.67■□□□□ 0.58
TMEM39A-203ENST00000461654 SKAP1Q86WV1 359 aa18.67■□□□□ 0.58
TMEM39A-203ENST00000461654 RHPN1Q8TCX5 695 aa18.67■□□□□ 0.58
TMEM39A-203ENST00000461654 SIL1Q9H173 461 aa18.67■□□□□ 0.58
TMEM39A-203ENST00000461654 CEP350Q5VT06 3117 aa18.67■□□□□ 0.58
TMEM39A-203ENST00000461654 SMARCA5O60264 1052 aaPredicted RBP18.66■□□□□ 0.58
TMEM39A-203ENST00000461654 POTEIP0CG38 1075 aa18.66■□□□□ 0.58
TMEM39A-203ENST00000461654 POTEJP0CG39 1038 aa18.66■□□□□ 0.58
TMEM39A-203ENST00000461654 PTPN12Q05209 780 aaKnown RBP18.66■□□□□ 0.58
TMEM39A-203ENST00000461654 FAM161AQ3B820 660 aa18.66■□□□□ 0.58
TMEM39A-203ENST00000461654 FBXO3Q9UK99 471 aa18.66■□□□□ 0.58
TMEM39A-203ENST00000461654 LRRC37AA6NMS7 1700 aa18.66■□□□□ 0.58
TMEM39A-203ENST00000461654 PDE4AP27815 886 aa18.65■□□□□ 0.58
TMEM39A-203ENST00000461654 CLASRPQ8N2M8 674 aaKnown RBP18.65■□□□□ 0.58
TMEM39A-203ENST00000461654 KLHDC4Q8TBB5 520 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms