RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 ATP5J2-PTCD1G3V325 749 aa18.01■□□□□ 0.47
PABPC4-208ENST00000461578 CSRNP1Q96S65 589 aa18.01■□□□□ 0.47
PABPC4-208ENST00000461578 EYA3Q99504 573 aa18.01■□□□□ 0.47
PABPC4-208ENST00000461578 CTU1Q7Z7A3 348 aaKnown RBP18■□□□□ 0.47
PABPC4-208ENST00000461578 CDCA5Q96FF9 252 aa18■□□□□ 0.47
PABPC4-208ENST00000461578 CHPF2Q9P2E5 772 aa18■□□□□ 0.47
PABPC4-208ENST00000461578 SCN9AQ15858 1988 aa18■□□□□ 0.47
PABPC4-208ENST00000461578 SF3B3Q15393 1217 aaKnown RBP17.99■□□□□ 0.47
PABPC4-208ENST00000461578 TBC1D16Q8TBP0 767 aa17.99■□□□□ 0.47
PABPC4-208ENST00000461578 G3V3G9 751 aa17.98■□□□□ 0.47
PABPC4-208ENST00000461578 DCAF8Q5TAQ9 597 aa17.98■□□□□ 0.47
PABPC4-208ENST00000461578 RASAL3Q86YV0 1011 aa17.98■□□□□ 0.47
PABPC4-208ENST00000461578 PLBD2Q8NHP8 589 aa17.98■□□□□ 0.47
PABPC4-208ENST00000461578 BABAM1Q9NWV8 329 aa17.98■□□□□ 0.47
PABPC4-208ENST00000461578 LAS1LQ9Y4W2 734 aaKnown RBP17.98■□□□□ 0.47
PABPC4-208ENST00000461578 VIL1P09327 827 aaKnown RBP17.97■□□□□ 0.47
PABPC4-208ENST00000461578 NEUROD2Q15784 382 aa17.97■□□□□ 0.47
PABPC4-208ENST00000461578 ANGEL2Q5VTE6 544 aaKnown RBP17.97■□□□□ 0.47
PABPC4-208ENST00000461578 ANKRD13DQ6ZTN6 518 aa17.97■□□□□ 0.47
PABPC4-208ENST00000461578 ISCA1Q9BUE6 129 aa17.97■□□□□ 0.47
PABPC4-208ENST00000461578 ZC3H12CQ9C0D7 883 aaKnown RBP17.97■□□□□ 0.47
PABPC4-208ENST00000461578 IRS4O14654 1257 aaPredicted RBP17.96■□□□□ 0.47
PABPC4-208ENST00000461578 UFL1O94874 794 aa17.96■□□□□ 0.47
PABPC4-208ENST00000461578 TMPOP42166 694 aaKnown RBP17.96■□□□□ 0.47
PABPC4-208ENST00000461578 RPS8P62241 208 aaKnown RBP17.96■□□□□ 0.47
PABPC4-208ENST00000461578 LMOD3Q0VAK6 560 aa17.96■□□□□ 0.47
PABPC4-208ENST00000461578 SCARF1Q14162 830 aa17.96■□□□□ 0.47
PABPC4-208ENST00000461578 HDGFL1Q5TGJ6 251 aa17.96■□□□□ 0.47
PABPC4-208ENST00000461578 SCAF8Q9UPN6 1271 aaKnown RBP17.96■□□□□ 0.47
PABPC4-208ENST00000461578 PRPF38BQ5VTL8 546 aaKnown RBP17.95■□□□□ 0.46
PABPC4-208ENST00000461578 MOB2Q70IA6 237 aa17.95■□□□□ 0.46
PABPC4-208ENST00000461578 SEC31BQ9NQW1 1179 aa17.95■□□□□ 0.46
PABPC4-208ENST00000461578 ANKIB1Q9P2G1 1089 aa17.95■□□□□ 0.46
PABPC4-208ENST00000461578 HPS5Q9UPZ3 1129 aa17.95■□□□□ 0.46
PABPC4-208ENST00000461578 HDAC9Q9UKV0 1011 aa17.94■□□□□ 0.46
PABPC4-208ENST00000461578 TBC1D8O95759 1140 aa17.93■□□□□ 0.46
PABPC4-208ENST00000461578 RSBN1LQ6PCB5 846 aaPredicted RBP17.93■□□□□ 0.46
PABPC4-208ENST00000461578 CCDC146Q8IYE0 955 aa17.93■□□□□ 0.46
PABPC4-208ENST00000461578 GGA1Q9UJY5 639 aa17.93■□□□□ 0.46
PABPC4-208ENST00000461578 PAPPA2Q9BXP8 1791 aa17.93■□□□□ 0.46
PABPC4-208ENST00000461578 CHL1O00533 1208 aa17.92■□□□□ 0.46
PABPC4-208ENST00000461578 ZNF280AP59817 542 aaPredicted RBP17.92■□□□□ 0.46
PABPC4-208ENST00000461578 PRAMEF18Q5VWM3 479 aa17.92■□□□□ 0.46
PABPC4-208ENST00000461578 REM2Q8IYK8 340 aaPredicted RBP17.92■□□□□ 0.46
PABPC4-208ENST00000461578 PODXL2Q9NZ53 605 aa17.92■□□□□ 0.46
PABPC4-208ENST00000461578 UBE2Q2LH0YL09 131 aa17.91■□□□□ 0.46
PABPC4-208ENST00000461578 AGBL3Q8NEM8 1001 aa17.91■□□□□ 0.46
PABPC4-208ENST00000461578 ZNF296Q8WUU4 475 aaPredicted RBP17.91■□□□□ 0.46
PABPC4-208ENST00000461578 CCDC85AQ96PX6 553 aaPredicted RBP17.91■□□□□ 0.46
PABPC4-208ENST00000461578 MYOZ2Q9NPC6 264 aa17.91■□□□□ 0.46
PABPC4-208ENST00000461578 DBF4Q9UBU7 674 aaPredicted RBP17.91■□□□□ 0.46
PABPC4-208ENST00000461578 FKBP1BP68106 108 aa17.9■□□□□ 0.46
PABPC4-208ENST00000461578 MKRN3Q13064 507 aaKnown RBP17.9■□□□□ 0.46
PABPC4-208ENST00000461578 TTLL12Q14166 644 aaPredicted RBP17.9■□□□□ 0.46
PABPC4-208ENST00000461578 PSME4Q14997 1843 aa17.89■□□□□ 0.45
PABPC4-208ENST00000461578 USP17L8P0C7I0 530 aa17.89■□□□□ 0.45
PABPC4-208ENST00000461578 RIC3Q7Z5B4 369 aa17.89■□□□□ 0.45
PABPC4-208ENST00000461578 JARID2Q92833 1246 aaPredicted RBP17.89■□□□□ 0.45
PABPC4-208ENST00000461578 PKN2Q16513 984 aaKnown RBP17.88■□□□□ 0.45
PABPC4-208ENST00000461578 ZBTB38Q8NAP3 1195 aaPredicted RBP17.88■□□□□ 0.45
PABPC4-208ENST00000461578 HYPKQ9NX55 129 aa17.88■□□□□ 0.45
PABPC4-208ENST00000461578 USP17L3A6NCW0 530 aa17.87■□□□□ 0.45
PABPC4-208ENST00000461578 USP17L4A6NCW7 530 aa17.87■□□□□ 0.45
PABPC4-208ENST00000461578 TRIM28Q13263 835 aaKnown RBP17.87■□□□□ 0.45
PABPC4-208ENST00000461578 DUSP27Q5VZP5 1158 aa17.87■□□□□ 0.45
PABPC4-208ENST00000461578 USP17L1Q7RTZ2 530 aa17.87■□□□□ 0.45
PABPC4-208ENST00000461578 GMLQ99445 158 aa17.87■□□□□ 0.45
PABPC4-208ENST00000461578 MYD88Q99836 296 aa17.87■□□□□ 0.45
PABPC4-208ENST00000461578 TRIM35Q9UPQ4 493 aa17.87■□□□□ 0.45
PABPC4-208ENST00000461578 PITPNM2Q9BZ72 1349 aa17.87■□□□□ 0.45
PABPC4-208ENST00000461578 ZNF609O15014 1411 aa17.87■□□□□ 0.45
PABPC4-208ENST00000461578 GPR25O00155 361 aa17.86■□□□□ 0.45
PABPC4-208ENST00000461578 HOXB7P09629 217 aa17.86■□□□□ 0.45
PABPC4-208ENST00000461578 GOLGA2Q08379 1002 aa17.86■□□□□ 0.45
PABPC4-208ENST00000461578 NBPF9Q3BBW0 867 aa17.86■□□□□ 0.45
PABPC4-208ENST00000461578 CCDC152Q4G0S7 254 aa17.86■□□□□ 0.45
PABPC4-208ENST00000461578 FBXW7Q969H0 707 aa17.86■□□□□ 0.45
PABPC4-208ENST00000461578 MXD3Q9BW11 206 aa17.86■□□□□ 0.45
PABPC4-208ENST00000461578 WTIPA6NIX2 430 aaPredicted RBP17.85■□□□□ 0.45
PABPC4-208ENST00000461578 XDHP47989 1333 aa17.85■□□□□ 0.45
PABPC4-208ENST00000461578 ANKRD18AQ8IVF6 992 aa17.85■□□□□ 0.45
PABPC4-208ENST00000461578 PHAXQ9H814 394 aaKnown RBP17.85■□□□□ 0.45
PABPC4-208ENST00000461578 PDE8AO60658 829 aa17.84■□□□□ 0.45
PABPC4-208ENST00000461578 HSP90B1P14625 803 aaKnown RBP17.84■□□□□ 0.45
PABPC4-208ENST00000461578 ATP2B4P23634 1241 aa17.84■□□□□ 0.45
PABPC4-208ENST00000461578 PRKG1Q13976 671 aa17.84■□□□□ 0.45
PABPC4-208ENST00000461578 FBXO46Q6PJ61 603 aaPredicted RBP17.84■□□□□ 0.45
PABPC4-208ENST00000461578 PCCAP05165 728 aaPredicted RBP17.83■□□□□ 0.44
PABPC4-208ENST00000461578 NF2P35240 595 aa17.83■□□□□ 0.44
PABPC4-208ENST00000461578 TM4SF4P48230 202 aa17.83■□□□□ 0.44
PABPC4-208ENST00000461578 PODNQ7Z5L7 613 aa17.83■□□□□ 0.44
PABPC4-208ENST00000461578 R3HDMLQ9H3Y0 253 aa17.83■□□□□ 0.44
PABPC4-208ENST00000461578 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.83■□□□□ 0.44
PABPC4-208ENST00000461578 SPEF2Q9C093 1822 aa17.82■□□□□ 0.44
PABPC4-208ENST00000461578 MBIPQ9NS73 344 aa17.82■□□□□ 0.44
PABPC4-208ENST00000461578 ELL2O00472 640 aaPredicted RBP17.81■□□□□ 0.44
PABPC4-208ENST00000461578 WNT10BO00744 389 aa17.81■□□□□ 0.44
PABPC4-208ENST00000461578 FKTNO75072 461 aa17.81■□□□□ 0.44
PABPC4-208ENST00000461578 SASH1O94885 1247 aa17.81■□□□□ 0.44
PABPC4-208ENST00000461578 PTPN12Q05209 780 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms