RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 GPR101Q96P66 508 aaPredicted RBP18.98■□□□□ 0.63
SMPD4-216ENST00000461187 EYA3Q99504 573 aa18.98■□□□□ 0.63
SMPD4-216ENST00000461187 METTL22Q9BUU2 404 aaPredicted RBP18.98■□□□□ 0.63
SMPD4-216ENST00000461187 KCNQ5Q9NR82 932 aa18.98■□□□□ 0.63
SMPD4-216ENST00000461187 CWC25Q9NXE8 425 aaPredicted RBP18.98■□□□□ 0.63
SMPD4-216ENST00000461187 RTL9Q8NET4 1388 aa18.97■□□□□ 0.63
SMPD4-216ENST00000461187 PDE8AO60658 829 aa18.97■□□□□ 0.63
SMPD4-216ENST00000461187 DOK7Q18PE1 504 aa18.97■□□□□ 0.63
SMPD4-216ENST00000461187 SAPCD2Q86UD0 394 aa18.97■□□□□ 0.63
SMPD4-216ENST00000461187 JARID2Q92833 1246 aaPredicted RBP18.97■□□□□ 0.63
SMPD4-216ENST00000461187 CHMP4AQ9BY43 222 aa18.97■□□□□ 0.63
SMPD4-216ENST00000461187 PODXL2Q9NZ53 605 aa18.97■□□□□ 0.63
SMPD4-216ENST00000461187 AKAP11Q9UKA4 1901 aa18.97■□□□□ 0.63
SMPD4-216ENST00000461187 DDX58O95786 925 aaKnown RBP18.96■□□□□ 0.63
SMPD4-216ENST00000461187 GRM1Q13255 1194 aa18.96■□□□□ 0.63
SMPD4-216ENST00000461187 CCDC152Q4G0S7 254 aa18.96■□□□□ 0.63
SMPD4-216ENST00000461187 CDC37L1Q7L3B6 337 aa18.96■□□□□ 0.63
SMPD4-216ENST00000461187 SAMD7Q7Z3H4 446 aa18.96■□□□□ 0.63
SMPD4-216ENST00000461187 TSR2Q969E8 191 aaKnown RBP18.95■□□□□ 0.62
SMPD4-216ENST00000461187 MAP3K2Q9Y2U5 619 aa18.95■□□□□ 0.62
SMPD4-216ENST00000461187 AOC2O75106 756 aa18.94■□□□□ 0.62
SMPD4-216ENST00000461187 EGFRP00533 1210 aa18.94■□□□□ 0.62
SMPD4-216ENST00000461187 RPS12P25398 132 aaKnown RBP18.94■□□□□ 0.62
SMPD4-216ENST00000461187 KSR2Q6VAB6 950 aa18.94■□□□□ 0.62
SMPD4-216ENST00000461187 HHIPL1Q96JK4 782 aa18.94■□□□□ 0.62
SMPD4-216ENST00000461187 CCDC85AQ96PX6 553 aaPredicted RBP18.94■□□□□ 0.62
SMPD4-216ENST00000461187 ZC3H12CQ9C0D7 883 aaKnown RBP18.94■□□□□ 0.62
SMPD4-216ENST00000461187 ZNF408Q9H9D4 720 aa18.94■□□□□ 0.62
SMPD4-216ENST00000461187 PI4KAP2A4QPH2 592 aa18.93■□□□□ 0.62
SMPD4-216ENST00000461187 UFL1O94874 794 aa18.93■□□□□ 0.62
SMPD4-216ENST00000461187 IGKV5-2P06315 115 aa18.93■□□□□ 0.62
SMPD4-216ENST00000461187 MAP2K2P36507 400 aa18.93■□□□□ 0.62
SMPD4-216ENST00000461187 CCDC27Q2M243 656 aa18.93■□□□□ 0.62
SMPD4-216ENST00000461187 TBC1D10BQ4KMP7 808 aaPredicted RBP18.93■□□□□ 0.62
SMPD4-216ENST00000461187 USP48Q86UV5 1035 aa18.93■□□□□ 0.62
SMPD4-216ENST00000461187 PI4KAP1Q8N8J0 262 aa18.93■□□□□ 0.62
SMPD4-216ENST00000461187 ANKIB1Q9P2G1 1089 aa18.93■□□□□ 0.62
SMPD4-216ENST00000461187 GGA1Q9UJY5 639 aa18.93■□□□□ 0.62
SMPD4-216ENST00000461187 VIL1P09327 827 aaKnown RBP18.92■□□□□ 0.62
SMPD4-216ENST00000461187 DLK2Q6UY11 383 aa18.92■□□□□ 0.62
SMPD4-216ENST00000461187 WWC1Q8IX03 1113 aa18.92■□□□□ 0.62
SMPD4-216ENST00000461187 A0A1B0GUL6 1792 aa18.91■□□□□ 0.62
SMPD4-216ENST00000461187 ANKRD18AQ8IVF6 992 aa18.91■□□□□ 0.62
SMPD4-216ENST00000461187 BEGAINQ9BUH8 593 aa18.91■□□□□ 0.62
SMPD4-216ENST00000461187 CTSWP56202 376 aa18.9■□□□□ 0.62
SMPD4-216ENST00000461187 TWISTNBQ3B726 338 aaPredicted RBP18.9■□□□□ 0.62
SMPD4-216ENST00000461187 RBM26Q5T8P6 1007 aaKnown RBP18.9■□□□□ 0.62
SMPD4-216ENST00000461187 G2E3Q7L622 706 aa18.9■□□□□ 0.62
SMPD4-216ENST00000461187 STK31Q9BXU1 1019 aa18.9■□□□□ 0.62
SMPD4-216ENST00000461187 XDHP47989 1333 aa18.9■□□□□ 0.62
SMPD4-216ENST00000461187 ZNF609O15014 1411 aa18.9■□□□□ 0.62
SMPD4-216ENST00000461187 G3V3G9 751 aa18.89■□□□□ 0.61
SMPD4-216ENST00000461187 DCAF8Q5TAQ9 597 aa18.89■□□□□ 0.61
SMPD4-216ENST00000461187 KRT26Q7Z3Y9 468 aa18.89■□□□□ 0.61
SMPD4-216ENST00000461187 TTLL11Q8NHH1 800 aa18.89■□□□□ 0.61
SMPD4-216ENST00000461187 NEURL1BA8MQ27 555 aa18.88■□□□□ 0.61
SMPD4-216ENST00000461187 NEXNQ0ZGT2 675 aa18.88■□□□□ 0.61
SMPD4-216ENST00000461187 CWF19L2Q2TBE0 894 aaKnown RBP18.88■□□□□ 0.61
SMPD4-216ENST00000461187 KIF4BQ2VIQ3 1234 aa18.88■□□□□ 0.61
SMPD4-216ENST00000461187 CDC5LQ99459 802 aaKnown RBP18.88■□□□□ 0.61
SMPD4-216ENST00000461187 IL16Q14005 1332 aa18.88■□□□□ 0.61
SMPD4-216ENST00000461187 ADM5C9JUS6 153 aa18.87■□□□□ 0.61
SMPD4-216ENST00000461187 SLC4A2P04920 1241 aa18.87■□□□□ 0.61
SMPD4-216ENST00000461187 ATP2B4P23634 1241 aa18.87■□□□□ 0.61
SMPD4-216ENST00000461187 HUNKP57058 714 aa18.87■□□□□ 0.61
SMPD4-216ENST00000461187 NCBP3Q53F19 620 aaKnown RBP18.87■□□□□ 0.61
SMPD4-216ENST00000461187 RSBN1LQ6PCB5 846 aaPredicted RBP18.87■□□□□ 0.61
SMPD4-216ENST00000461187 DCPSQ96C86 337 aaKnown RBP18.87■□□□□ 0.61
SMPD4-216ENST00000461187 GREM2Q9H772 168 aa18.87■□□□□ 0.61
SMPD4-216ENST00000461187 TSKSQ9UJT2 592 aa18.87■□□□□ 0.61
SMPD4-216ENST00000461187 ASTN2O75129 1339 aaPredicted RBP18.86■□□□□ 0.61
SMPD4-216ENST00000461187 WTIPA6NIX2 430 aaPredicted RBP18.86■□□□□ 0.61
SMPD4-216ENST00000461187 H7C1W4 665 aa18.86■□□□□ 0.61
SMPD4-216ENST00000461187 BRPF1P55201 1214 aaPredicted RBP18.86■□□□□ 0.61
SMPD4-216ENST00000461187 ZNF280AP59817 542 aaPredicted RBP18.86■□□□□ 0.61
SMPD4-216ENST00000461187 AGBL3Q8NEM8 1001 aa18.86■□□□□ 0.61
SMPD4-216ENST00000461187 BSDC1Q9NW68 430 aaPredicted RBP18.86■□□□□ 0.61
SMPD4-216ENST00000461187 MINPP1Q9UNW1 487 aa18.86■□□□□ 0.61
SMPD4-216ENST00000461187 ZIC5Q96T25 663 aa18.85■□□□□ 0.61
SMPD4-216ENST00000461187 GMLQ99445 158 aa18.85■□□□□ 0.61
SMPD4-216ENST00000461187 GBA2Q9HCG7 927 aaPredicted RBP18.85■□□□□ 0.61
SMPD4-216ENST00000461187 GGA3Q9NZ52 723 aa18.85■□□□□ 0.61
SMPD4-216ENST00000461187 MED23Q9ULK4 1368 aa18.84■□□□□ 0.61
SMPD4-216ENST00000461187 ECM29Q5VYK3 1845 aa18.84■□□□□ 0.61
SMPD4-216ENST00000461187 CA12O43570 354 aa18.84■□□□□ 0.61
SMPD4-216ENST00000461187 NOGQ13253 232 aa18.84■□□□□ 0.61
SMPD4-216ENST00000461187 UBE3BQ7Z3V4 1068 aa18.84■□□□□ 0.61
SMPD4-216ENST00000461187 PODNQ7Z5L7 613 aa18.84■□□□□ 0.61
SMPD4-216ENST00000461187 ABHD8Q96I13 439 aa18.84■□□□□ 0.61
SMPD4-216ENST00000461187 FANCIQ9NVI1 1328 aa18.83■□□□□ 0.61
SMPD4-216ENST00000461187 USP17L3A6NCW0 530 aa18.83■□□□□ 0.6
SMPD4-216ENST00000461187 USP17L4A6NCW7 530 aa18.83■□□□□ 0.6
SMPD4-216ENST00000461187 FLIIQ13045 1269 aa18.83■□□□□ 0.6
SMPD4-216ENST00000461187 GCKRQ14397 625 aa18.83■□□□□ 0.6
SMPD4-216ENST00000461187 USP17L1Q7RTZ2 530 aa18.83■□□□□ 0.6
SMPD4-216ENST00000461187 SULF1Q8IWU6 871 aa18.83■□□□□ 0.6
SMPD4-216ENST00000461187 C2orf69Q8N8R5 385 aa18.83■□□□□ 0.6
SMPD4-216ENST00000461187 MRS2Q9HD23 443 aa18.83■□□□□ 0.6
SMPD4-216ENST00000461187 FAM155AB1AL88 458 aaPredicted RBP18.82■□□□□ 0.6
SMPD4-216ENST00000461187 CCT4P50991 539 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms