RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 G3V3G9 751 aa22.57■■□□□ 1.2
TOP3A-202ENST00000461127 DCAF8Q5TAQ9 597 aa22.57■■□□□ 1.2
TOP3A-202ENST00000461127 GCC1Q96CN9 775 aa22.57■■□□□ 1.2
TOP3A-202ENST00000461127 RTL9Q8NET4 1388 aa22.57■■□□□ 1.2
TOP3A-202ENST00000461127 CELF1Q92879 486 aaKnown RBP22.56■■□□□ 1.2
TOP3A-202ENST00000461127 ZC3H12CQ9C0D7 883 aaKnown RBP22.56■■□□□ 1.2
TOP3A-202ENST00000461127 KCNQ5Q9NR82 932 aa22.56■■□□□ 1.2
TOP3A-202ENST00000461127 VIL1P09327 827 aaKnown RBP22.55■■□□□ 1.2
TOP3A-202ENST00000461127 GPSM2P81274 684 aa22.55■■□□□ 1.2
TOP3A-202ENST00000461127 SF3B3Q15393 1217 aaKnown RBP22.55■■□□□ 1.2
TOP3A-202ENST00000461127 NECTIN2Q92692 538 aa22.55■■□□□ 1.2
TOP3A-202ENST00000461127 BABAM1Q9NWV8 329 aa22.55■■□□□ 1.2
TOP3A-202ENST00000461127 ANGEL2Q5VTE6 544 aaKnown RBP22.53■■□□□ 1.2
TOP3A-202ENST00000461127 TBC1D16Q8TBP0 767 aa22.53■■□□□ 1.2
TOP3A-202ENST00000461127 ZNF296Q8WUU4 475 aaPredicted RBP22.53■■□□□ 1.2
TOP3A-202ENST00000461127 ASTN2O75129 1339 aaPredicted RBP22.53■■□□□ 1.2
TOP3A-202ENST00000461127 PAPPA2Q9BXP8 1791 aa22.53■■□□□ 1.2
TOP3A-202ENST00000461127 SCARF1Q14162 830 aa22.52■■□□□ 1.2
TOP3A-202ENST00000461127 AGBL3Q8NEM8 1001 aa22.52■■□□□ 1.2
TOP3A-202ENST00000461127 ZNF280AP59817 542 aaPredicted RBP22.51■■□□□ 1.19
TOP3A-202ENST00000461127 ZNF428Q96B54 188 aa22.51■■□□□ 1.19
TOP3A-202ENST00000461127 FAM89AQ96GI7 184 aa22.51■■□□□ 1.19
TOP3A-202ENST00000461127 TBC1D8O95759 1140 aa22.5■■□□□ 1.19
TOP3A-202ENST00000461127 RPS8P62241 208 aaKnown RBP22.5■■□□□ 1.19
TOP3A-202ENST00000461127 FBXO46Q6PJ61 603 aaPredicted RBP22.5■■□□□ 1.19
TOP3A-202ENST00000461127 PITPNM2Q9BZ72 1349 aa22.5■■□□□ 1.19
TOP3A-202ENST00000461127 SCN9AQ15858 1988 aa22.49■■□□□ 1.19
TOP3A-202ENST00000461127 NOM1Q5C9Z4 860 aaKnown RBP22.49■■□□□ 1.19
TOP3A-202ENST00000461127 RSBN1LQ6PCB5 846 aaPredicted RBP22.49■■□□□ 1.19
TOP3A-202ENST00000461127 PLBD2Q8NHP8 589 aa22.49■■□□□ 1.19
TOP3A-202ENST00000461127 ANKIB1Q9P2G1 1089 aa22.49■■□□□ 1.19
TOP3A-202ENST00000461127 UFL1O94874 794 aa22.48■■□□□ 1.19
TOP3A-202ENST00000461127 RIPK4P57078 832 aa22.48■■□□□ 1.19
TOP3A-202ENST00000461127 PODXL2Q9NZ53 605 aa22.48■■□□□ 1.19
TOP3A-202ENST00000461127 GGA1Q9UJY5 639 aa22.48■■□□□ 1.19
TOP3A-202ENST00000461127 ZNF609O15014 1411 aa22.48■■□□□ 1.19
TOP3A-202ENST00000461127 GPR25O00155 361 aa22.47■■□□□ 1.19
TOP3A-202ENST00000461127 USP17L8P0C7I0 530 aa22.47■■□□□ 1.19
TOP3A-202ENST00000461127 LMOD3Q0VAK6 560 aa22.47■■□□□ 1.19
TOP3A-202ENST00000461127 TTLL12Q14166 644 aaPredicted RBP22.47■■□□□ 1.19
TOP3A-202ENST00000461127 ANKRD13DQ6ZTN6 518 aa22.47■■□□□ 1.19
TOP3A-202ENST00000461127 ISCA1Q9BUE6 129 aa22.47■■□□□ 1.19
TOP3A-202ENST00000461127 MYOZ2Q9NPC6 264 aa22.47■■□□□ 1.19
TOP3A-202ENST00000461127 UBE2Q2LH0YL09 131 aa22.46■■□□□ 1.19
TOP3A-202ENST00000461127 IRS4O14654 1257 aaPredicted RBP22.46■■□□□ 1.19
TOP3A-202ENST00000461127 HSP90B1P14625 803 aaKnown RBP22.46■■□□□ 1.19
TOP3A-202ENST00000461127 ATP5J2-PTCD1G3V325 749 aa22.45■■□□□ 1.18
TOP3A-202ENST00000461127 TM4SF4P48230 202 aa22.45■■□□□ 1.18
TOP3A-202ENST00000461127 SREBF2Q12772 1141 aa22.45■■□□□ 1.18
TOP3A-202ENST00000461127 RTL5Q5HYW3 569 aaPredicted RBP22.45■■□□□ 1.18
TOP3A-202ENST00000461127 CHPF2Q9P2E5 772 aa22.45■■□□□ 1.18
TOP3A-202ENST00000461127 FKTNO75072 461 aa22.44■■□□□ 1.18
TOP3A-202ENST00000461127 NF2P35240 595 aa22.44■■□□□ 1.18
TOP3A-202ENST00000461127 MOB2Q70IA6 237 aa22.44■■□□□ 1.18
TOP3A-202ENST00000461127 HDGFL1Q5TGJ6 251 aa22.42■■□□□ 1.18
TOP3A-202ENST00000461127 USP17L3A6NCW0 530 aa22.41■■□□□ 1.18
TOP3A-202ENST00000461127 USP17L4A6NCW7 530 aa22.41■■□□□ 1.18
TOP3A-202ENST00000461127 USP17L1Q7RTZ2 530 aa22.41■■□□□ 1.18
TOP3A-202ENST00000461127 PODNQ7Z5L7 613 aa22.41■■□□□ 1.18
TOP3A-202ENST00000461127 GMLQ99445 158 aa22.41■■□□□ 1.18
TOP3A-202ENST00000461127 DBF4Q9UBU7 674 aaPredicted RBP22.41■■□□□ 1.18
TOP3A-202ENST00000461127 COL4A1P02462 1669 aa22.41■■□□□ 1.18
TOP3A-202ENST00000461127 PSME4Q14997 1843 aa22.41■■□□□ 1.18
TOP3A-202ENST00000461127 MKRN3Q13064 507 aaKnown RBP22.4■■□□□ 1.18
TOP3A-202ENST00000461127 TRIM28Q13263 835 aaKnown RBP22.4■■□□□ 1.18
TOP3A-202ENST00000461127 HABP4Q5JVS0 413 aaKnown RBP22.4■■□□□ 1.18
TOP3A-202ENST00000461127 CCDC152Q4G0S7 254 aa22.39■■□□□ 1.17
TOP3A-202ENST00000461127 PRAMEF18Q5VWM3 479 aa22.39■■□□□ 1.17
TOP3A-202ENST00000461127 OGFOD1Q8N543 542 aa22.39■■□□□ 1.17
TOP3A-202ENST00000461127 CFHR5Q9BXR6 569 aa22.39■■□□□ 1.17
TOP3A-202ENST00000461127 SEC31BQ9NQW1 1179 aa22.39■■□□□ 1.17
TOP3A-202ENST00000461127 HYPKQ9NX55 129 aa22.39■■□□□ 1.17
TOP3A-202ENST00000461127 SCAF8Q9UPN6 1271 aaKnown RBP22.39■■□□□ 1.17
TOP3A-202ENST00000461127 XDHP47989 1333 aa22.38■■□□□ 1.17
TOP3A-202ENST00000461127 ALDH1A1P00352 501 aa22.38■■□□□ 1.17
TOP3A-202ENST00000461127 HOXB7P09629 217 aa22.38■■□□□ 1.17
TOP3A-202ENST00000461127 TMPOP42166 694 aaKnown RBP22.38■■□□□ 1.17
TOP3A-202ENST00000461127 KRT24Q2M2I5 525 aa22.38■■□□□ 1.17
TOP3A-202ENST00000461127 INTS3Q68E01 1043 aaKnown RBP22.38■■□□□ 1.17
TOP3A-202ENST00000461127 ARMC9Q7Z3E5 817 aa22.38■■□□□ 1.17
TOP3A-202ENST00000461127 ZBTB38Q8NAP3 1195 aaPredicted RBP22.38■■□□□ 1.17
TOP3A-202ENST00000461127 NBPF9Q3BBW0 867 aa22.37■■□□□ 1.17
TOP3A-202ENST00000461127 LAS1LQ9Y4W2 734 aaKnown RBP22.37■■□□□ 1.17
TOP3A-202ENST00000461127 CHL1O00533 1208 aa22.36■■□□□ 1.17
TOP3A-202ENST00000461127 ATP2B4P23634 1241 aa22.36■■□□□ 1.17
TOP3A-202ENST00000461127 RIC3Q7Z5B4 369 aa22.35■■□□□ 1.17
TOP3A-202ENST00000461127 ANKRD18AQ8IVF6 992 aa22.35■■□□□ 1.17
TOP3A-202ENST00000461127 PTPN12Q05209 780 aaKnown RBP22.34■■□□□ 1.17
TOP3A-202ENST00000461127 TRIM17Q9Y577 477 aa22.34■■□□□ 1.17
TOP3A-202ENST00000461127 MYO3BQ8WXR4 1341 aa22.33■■□□□ 1.17
TOP3A-202ENST00000461127 WNT10BO00744 389 aa22.33■■□□□ 1.17
TOP3A-202ENST00000461127 MMP14P50281 582 aa22.33■■□□□ 1.17
TOP3A-202ENST00000461127 INHBEP58166 350 aa22.33■■□□□ 1.17
TOP3A-202ENST00000461127 GOLGA2Q08379 1002 aa22.33■■□□□ 1.17
TOP3A-202ENST00000461127 R3HDMLQ9H3Y0 253 aa22.33■■□□□ 1.17
TOP3A-202ENST00000461127 PDE8AO60658 829 aa22.32■■□□□ 1.16
TOP3A-202ENST00000461127 NEUROD2Q15784 382 aa22.32■■□□□ 1.16
TOP3A-202ENST00000461127 APOBEC3FQ8IUX4 373 aaKnown RBP22.32■■□□□ 1.16
TOP3A-202ENST00000461127 FBXW7Q969H0 707 aa22.32■■□□□ 1.16
TOP3A-202ENST00000461127 MKI67P46013 3256 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms