RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 EPHA10Q5JZY3 1008 aa20.79■□□□□ 0.92
SMARCD3-204ENST00000460431 NIM1KQ8IY84 436 aa20.79■□□□□ 0.92
SMARCD3-204ENST00000460431 HACL1Q9UJ83 578 aa20.79■□□□□ 0.92
SMARCD3-204ENST00000460431 SCN4AP35499 1836 aa20.78■□□□□ 0.92
SMARCD3-204ENST00000460431 EIF6P56537 245 aaKnown RBP20.78■□□□□ 0.92
SMARCD3-204ENST00000460431 LDHDQ86WU2 507 aa20.78■□□□□ 0.92
SMARCD3-204ENST00000460431 GPC2Q8N158 579 aa20.78■□□□□ 0.92
SMARCD3-204ENST00000460431 TBC1D16Q8TBP0 767 aa20.78■□□□□ 0.92
SMARCD3-204ENST00000460431 ARHGAP45Q92619 1136 aa20.78■□□□□ 0.92
SMARCD3-204ENST00000460431 API5Q9BZZ5 524 aaKnown RBP20.78■□□□□ 0.92
SMARCD3-204ENST00000460431 C6orf229H3BNL8 230 aa20.77■□□□□ 0.92
SMARCD3-204ENST00000460431 IGHMBP2P38935 993 aaKnown RBP20.77■□□□□ 0.92
SMARCD3-204ENST00000460431 WASHC4Q2M389 1173 aa20.77■□□□□ 0.92
SMARCD3-204ENST00000460431 LMBR1LQ6UX01 489 aa20.77■□□□□ 0.92
SMARCD3-204ENST00000460431 KAZALD1Q96I82 304 aa20.77■□□□□ 0.92
SMARCD3-204ENST00000460431 USP44Q9H0E7 712 aa20.77■□□□□ 0.92
SMARCD3-204ENST00000460431 ANKIB1Q9P2G1 1089 aa20.77■□□□□ 0.92
SMARCD3-204ENST00000460431 ZNRF3Q9ULT6 936 aa20.77■□□□□ 0.92
SMARCD3-204ENST00000460431 MINPP1Q9UNW1 487 aa20.77■□□□□ 0.92
SMARCD3-204ENST00000460431 KIF16BQ96L93 1317 aa20.77■□□□□ 0.91
SMARCD3-204ENST00000460431 ANKRD18BA2A2Z9 1011 aa20.76■□□□□ 0.91
SMARCD3-204ENST00000460431 EPHX2P34913 555 aa20.76■□□□□ 0.91
SMARCD3-204ENST00000460431 IFIT5Q13325 482 aaKnown RBP20.76■□□□□ 0.91
SMARCD3-204ENST00000460431 SUCLG2Q96I99 432 aa20.76■□□□□ 0.91
SMARCD3-204ENST00000460431 EYA3Q99504 573 aa20.76■□□□□ 0.91
SMARCD3-204ENST00000460431 XDHP47989 1333 aa20.76■□□□□ 0.91
SMARCD3-204ENST00000460431 PASKQ96RG2 1323 aa20.76■□□□□ 0.91
SMARCD3-204ENST00000460431 BCAR3O75815 825 aa20.75■□□□□ 0.91
SMARCD3-204ENST00000460431 ITGBL1O95965 494 aaPredicted RBP20.75■□□□□ 0.91
SMARCD3-204ENST00000460431 CCT4P50991 539 aaKnown RBP20.75■□□□□ 0.91
SMARCD3-204ENST00000460431 GGA1Q9UJY5 639 aa20.75■□□□□ 0.91
SMARCD3-204ENST00000460431 UFL1O94874 794 aa20.74■□□□□ 0.91
SMARCD3-204ENST00000460431 EAPPQ56P03 285 aaPredicted RBP20.74■□□□□ 0.91
SMARCD3-204ENST00000460431 MPHOSPH8Q99549 860 aa20.74■□□□□ 0.91
SMARCD3-204ENST00000460431 CREBZFQ9NS37 354 aa20.74■□□□□ 0.91
SMARCD3-204ENST00000460431 CHMP3Q9Y3E7 222 aa20.74■□□□□ 0.91
SMARCD3-204ENST00000460431 RIMBP2O15034 1052 aa20.73■□□□□ 0.91
SMARCD3-204ENST00000460431 IPO8O15397 1037 aaKnown RBP20.73■□□□□ 0.91
SMARCD3-204ENST00000460431 ATP2B4P23634 1241 aa20.73■□□□□ 0.91
SMARCD3-204ENST00000460431 CXCL9Q07325 125 aa20.73■□□□□ 0.91
SMARCD3-204ENST00000460431 PNMA8AQ86V59 439 aaPredicted RBP20.73■□□□□ 0.91
SMARCD3-204ENST00000460431 ZC3H12CQ9C0D7 883 aaKnown RBP20.73■□□□□ 0.91
SMARCD3-204ENST00000460431 YDJCA8MPS7 323 aa20.72■□□□□ 0.91
SMARCD3-204ENST00000460431 CCDC57Q2TAC2 916 aa20.72■□□□□ 0.91
SMARCD3-204ENST00000460431 RABL6Q3YEC7 729 aaPredicted RBP20.72■□□□□ 0.91
SMARCD3-204ENST00000460431 GPR101Q96P66 508 aaPredicted RBP20.72■□□□□ 0.91
SMARCD3-204ENST00000460431 GJA3Q9Y6H8 435 aa20.72■□□□□ 0.91
SMARCD3-204ENST00000460431 SCNN1DP51172 638 aa20.71■□□□□ 0.91
SMARCD3-204ENST00000460431 BICC1Q9H694 974 aaKnown RBP20.71■□□□□ 0.91
SMARCD3-204ENST00000460431 CLEC11AQ9Y240 323 aa20.71■□□□□ 0.91
SMARCD3-204ENST00000460431 WTIPA6NIX2 430 aaPredicted RBP20.7■□□□□ 0.9
SMARCD3-204ENST00000460431 INTS3Q68E01 1043 aaKnown RBP20.7■□□□□ 0.9
SMARCD3-204ENST00000460431 CIAPIN1Q6FI81 312 aa20.7■□□□□ 0.9
SMARCD3-204ENST00000460431 ANKRD44Q8N8A2 993 aa20.7■□□□□ 0.9
SMARCD3-204ENST00000460431 ANKRD2Q9GZV1 360 aa20.7■□□□□ 0.9
SMARCD3-204ENST00000460431 DBNDD1Q9H9R9 158 aa20.7■□□□□ 0.9
SMARCD3-204ENST00000460431 LEMD3Q9Y2U8 911 aa20.7■□□□□ 0.9
SMARCD3-204ENST00000460431 ADAMTSL1Q8N6G6 1762 aa20.69■□□□□ 0.9
SMARCD3-204ENST00000460431 SCN9AQ15858 1988 aa20.69■□□□□ 0.9
SMARCD3-204ENST00000460431 TRIM27P14373 513 aa20.69■□□□□ 0.9
SMARCD3-204ENST00000460431 TNIP1Q15025 636 aa20.69■□□□□ 0.9
SMARCD3-204ENST00000460431 DOK7Q18PE1 504 aa20.69■□□□□ 0.9
SMARCD3-204ENST00000460431 ATF7IPQ6VMQ6 1270 aa20.69■□□□□ 0.9
SMARCD3-204ENST00000460431 FRAT1Q92837 279 aaPredicted RBP20.69■□□□□ 0.9
SMARCD3-204ENST00000460431 ZNF594Q96JF6 807 aaPredicted RBP20.69■□□□□ 0.9
SMARCD3-204ENST00000460431 ECE2O60344 883 aa20.68■□□□□ 0.9
SMARCD3-204ENST00000460431 RAD17O75943 681 aa20.68■□□□□ 0.9
SMARCD3-204ENST00000460431 EPS15P42566 896 aa20.68■□□□□ 0.9
SMARCD3-204ENST00000460431 CHRNDQ07001 517 aa20.68■□□□□ 0.9
SMARCD3-204ENST00000460431 MAP1SQ66K74 1059 aaPredicted RBP20.68■□□□□ 0.9
SMARCD3-204ENST00000460431 LDHAL6AQ6ZMR3 332 aa20.68■□□□□ 0.9
SMARCD3-204ENST00000460431 CNTROBQ8N137 903 aa20.68■□□□□ 0.9
SMARCD3-204ENST00000460431 MKRN1Q9UHC7 482 aaKnown RBP20.68■□□□□ 0.9
SMARCD3-204ENST00000460431 TAF7LQ5H9L4 462 aa20.67■□□□□ 0.9
SMARCD3-204ENST00000460431 A0A1B0GUL6 1792 aa20.67■□□□□ 0.9
SMARCD3-204ENST00000460431 TMEM88BA6NKF7 163 aa20.66■□□□□ 0.9
SMARCD3-204ENST00000460431 UBTFL1P0CB47 393 aaPredicted RBP20.66■□□□□ 0.9
SMARCD3-204ENST00000460431 LMOD1P29536 600 aaPredicted RBP20.66■□□□□ 0.9
SMARCD3-204ENST00000460431 COL13A1Q5TAT6 717 aaPredicted RBP20.66■□□□□ 0.9
SMARCD3-204ENST00000460431 ZKSCAN2Q63HK3 967 aa20.66■□□□□ 0.9
SMARCD3-204ENST00000460431 KCNQ5Q9NR82 932 aa20.66■□□□□ 0.9
SMARCD3-204ENST00000460431 TNNQ9UQP3 1299 aa20.66■□□□□ 0.9
SMARCD3-204ENST00000460431 ZNF804BA4D1E1 1349 aa20.66■□□□□ 0.9
SMARCD3-204ENST00000460431 MED23Q9ULK4 1368 aa20.66■□□□□ 0.9
SMARCD3-204ENST00000460431 PSME4Q14997 1843 aa20.65■□□□□ 0.9
SMARCD3-204ENST00000460431 G3V3G9 751 aa20.65■□□□□ 0.9
SMARCD3-204ENST00000460431 HSPA1AP0DMV8 641 aaKnown RBP20.65■□□□□ 0.9
SMARCD3-204ENST00000460431 HSPA1BP0DMV9 641 aaKnown RBP20.65■□□□□ 0.9
SMARCD3-204ENST00000460431 DCAF8Q5TAQ9 597 aa20.65■□□□□ 0.9
SMARCD3-204ENST00000460431 CNNM1Q9NRU3 951 aa20.65■□□□□ 0.9
SMARCD3-204ENST00000460431 GPRC5DQ9NZD1 345 aa20.65■□□□□ 0.9
SMARCD3-204ENST00000460431 HDAC5Q9UQL6 1122 aa20.65■□□□□ 0.9
SMARCD3-204ENST00000460431 PCNTO95613 3336 aa20.65■□□□□ 0.9
SMARCD3-204ENST00000460431 CNTNAP1P78357 1384 aa20.64■□□□□ 0.89
SMARCD3-204ENST00000460431 PSMD14O00487 310 aa20.64■□□□□ 0.89
SMARCD3-204ENST00000460431 GMPSP49915 693 aaPredicted RBP20.64■□□□□ 0.89
SMARCD3-204ENST00000460431 HELBQ8NG08 1087 aaPredicted RBP20.64■□□□□ 0.89
SMARCD3-204ENST00000460431 TAF5LO75529 589 aa20.63■□□□□ 0.89
SMARCD3-204ENST00000460431 USP50Q70EL3 339 aaPredicted RBP20.63■□□□□ 0.89
SMARCD3-204ENST00000460431 PODNQ7Z5L7 613 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms