RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 KIF13BQ9NQT8 1826 aa15.22■□□□□ 0.03
HDAC4-206ENST00000460235 CLASRPQ8N2M8 674 aaKnown RBP15.22■□□□□ 0.03
HDAC4-206ENST00000460235 LRRCC1Q9C099 1032 aa15.22■□□□□ 0.03
HDAC4-206ENST00000460235 SIL1Q9H173 461 aa15.22■□□□□ 0.03
HDAC4-206ENST00000460235 ANKIB1Q9P2G1 1089 aa15.22■□□□□ 0.03
HDAC4-206ENST00000460235 LEMD3Q9Y2U8 911 aa15.22■□□□□ 0.03
HDAC4-206ENST00000460235 RIPOR2Q9Y4F9 1068 aa15.22■□□□□ 0.03
HDAC4-206ENST00000460235 XDHP47989 1333 aa15.21■□□□□ 0.03
HDAC4-206ENST00000460235 ATP2B4P23634 1241 aa15.21■□□□□ 0.03
HDAC4-206ENST00000460235 CCDC93Q567U6 631 aa15.21■□□□□ 0.03
HDAC4-206ENST00000460235 ZNF594Q96JF6 807 aaPredicted RBP15.21■□□□□ 0.03
HDAC4-206ENST00000460235 GPR108Q9NPR9 543 aa15.21■□□□□ 0.03
HDAC4-206ENST00000460235 IFIT1P09914 478 aaKnown RBP15.2■□□□□ 0.02
HDAC4-206ENST00000460235 SMC5Q8IY18 1101 aa15.2■□□□□ 0.02
HDAC4-206ENST00000460235 MPNDQ8N594 471 aa15.2■□□□□ 0.02
HDAC4-206ENST00000460235 EYA3Q99504 573 aa15.2■□□□□ 0.02
HDAC4-206ENST00000460235 VPS33BQ9H267 617 aa15.2■□□□□ 0.02
HDAC4-206ENST00000460235 MINPP1Q9UNW1 487 aa15.2■□□□□ 0.02
HDAC4-206ENST00000460235 PA2G4Q9UQ80 394 aaKnown RBP15.2■□□□□ 0.02
HDAC4-206ENST00000460235 EXOC6BQ9Y2D4 811 aa15.2■□□□□ 0.02
HDAC4-206ENST00000460235 LRP5O75197 1615 aa15.2■□□□□ 0.02
HDAC4-206ENST00000460235 ANKRD31Q8N7Z5 1873 aa15.2■□□□□ 0.02
HDAC4-206ENST00000460235 PDE8BO95263 885 aa15.19■□□□□ 0.02
HDAC4-206ENST00000460235 SLC5A1P13866 664 aa15.19■□□□□ 0.02
HDAC4-206ENST00000460235 KCNA3P22001 575 aa15.19■□□□□ 0.02
HDAC4-206ENST00000460235 CHRNDQ07001 517 aa15.19■□□□□ 0.02
HDAC4-206ENST00000460235 UBE4AQ14139 1066 aa15.19■□□□□ 0.02
HDAC4-206ENST00000460235 PUM3Q15397 648 aaKnown RBP15.19■□□□□ 0.02
HDAC4-206ENST00000460235 DPP8Q6V1X1 898 aaPredicted RBP15.19■□□□□ 0.02
HDAC4-206ENST00000460235 KLHDC4Q8TBB5 520 aa15.19■□□□□ 0.02
HDAC4-206ENST00000460235 RHPN1Q8TCX5 695 aa15.19■□□□□ 0.02
HDAC4-206ENST00000460235 GPATCH3Q96I76 525 aa15.19■□□□□ 0.02
HDAC4-206ENST00000460235 PODXL2Q9NZ53 605 aa15.19■□□□□ 0.02
HDAC4-206ENST00000460235 GGA1Q9UJY5 639 aa15.19■□□□□ 0.02
HDAC4-206ENST00000460235 NSFL1CQ9UNZ2 370 aaKnown RBP15.19■□□□□ 0.02
HDAC4-206ENST00000460235 BCS1LQ9Y276 419 aa15.19■□□□□ 0.02
HDAC4-206ENST00000460235 TNRC6CQ9HCJ0 1690 aaKnown RBP15.19■□□□□ 0.02
HDAC4-206ENST00000460235 LRRC24Q50LG9 513 aa15.18■□□□□ 0.02
HDAC4-206ENST00000460235 ANKRD45Q5TZF3 282 aa15.18■□□□□ 0.02
HDAC4-206ENST00000460235 LPIN2Q92539 896 aa15.18■□□□□ 0.02
HDAC4-206ENST00000460235 GTF3C3Q9Y5Q9 886 aa15.18■□□□□ 0.02
HDAC4-206ENST00000460235 GRIN3BO60391 1043 aa15.17■□□□□ 0.02
HDAC4-206ENST00000460235 IFIT2P09913 472 aaKnown RBP15.17■□□□□ 0.02
HDAC4-206ENST00000460235 CAVIN4Q5BKX8 364 aa15.17■□□□□ 0.02
HDAC4-206ENST00000460235 GORABQ5T7V8 394 aa15.17■□□□□ 0.02
HDAC4-206ENST00000460235 ATG9AQ7Z3C6 839 aa15.17■□□□□ 0.02
HDAC4-206ENST00000460235 G3V3G9 751 aa15.16■□□□□ 0.02
HDAC4-206ENST00000460235 C6orf229H3BNL8 230 aa15.16■□□□□ 0.02
HDAC4-206ENST00000460235 C21orf2O43822 256 aa15.16■□□□□ 0.02
HDAC4-206ENST00000460235 IGHDP01880 384 aa15.16■□□□□ 0.02
HDAC4-206ENST00000460235 TFCP2Q12800 502 aa15.16■□□□□ 0.02
HDAC4-206ENST00000460235 ATP2B3Q16720 1220 aa15.16■□□□□ 0.02
HDAC4-206ENST00000460235 DCAF8Q5TAQ9 597 aa15.16■□□□□ 0.02
HDAC4-206ENST00000460235 NLGN2Q8NFZ4 835 aa15.16■□□□□ 0.02
HDAC4-206ENST00000460235 PUS3Q9BZE2 481 aaKnown RBP15.16■□□□□ 0.02
HDAC4-206ENST00000460235 GNL3LQ9NVN8 582 aaKnown RBP15.16■□□□□ 0.02
HDAC4-206ENST00000460235 ZNF804BA4D1E1 1349 aa15.16■□□□□ 0.02
HDAC4-206ENST00000460235 APBB1O00213 710 aa15.15■□□□□ 0.02
HDAC4-206ENST00000460235 CCDC158Q5M9N0 1113 aa15.15■□□□□ 0.02
HDAC4-206ENST00000460235 B4GALNT3Q6L9W6 998 aa15.15■□□□□ 0.02
HDAC4-206ENST00000460235 VPS37DQ86XT2 251 aa15.15■□□□□ 0.02
HDAC4-206ENST00000460235 C7orf43Q8WVR3 580 aa15.15■□□□□ 0.02
HDAC4-206ENST00000460235 NEUROD6Q96NK8 337 aa15.15■□□□□ 0.02
HDAC4-206ENST00000460235 PSMD1Q99460 953 aa15.15■□□□□ 0.02
HDAC4-206ENST00000460235 ZC3H12CQ9C0D7 883 aaKnown RBP15.15■□□□□ 0.02
HDAC4-206ENST00000460235 DLEC1Q9Y238 1755 aa15.15■□□□□ 0.02
HDAC4-206ENST00000460235 UFL1O94874 794 aa15.14■□□□□ 0.01
HDAC4-206ENST00000460235 SASH1O94885 1247 aa15.14■□□□□ 0.01
HDAC4-206ENST00000460235 NUCB1Q02818 461 aa15.14■□□□□ 0.01
HDAC4-206ENST00000460235 GPR162Q16538 588 aa15.14■□□□□ 0.01
HDAC4-206ENST00000460235 TNNI3KQ59H18 835 aa15.14■□□□□ 0.01
HDAC4-206ENST00000460235 CHD1LQ86WJ1 897 aa15.14■□□□□ 0.01
HDAC4-206ENST00000460235 FPGT-TNNI3KV9GXZ4 949 aa15.14■□□□□ 0.01
HDAC4-206ENST00000460235 COL11A2P13942 1736 aaPredicted RBP15.13■□□□□ 0.01
HDAC4-206ENST00000460235 GPSM2P81274 684 aa15.13■□□□□ 0.01
HDAC4-206ENST00000460235 FKBP4Q02790 459 aaKnown RBP eCLIP15.13■□□□□ 0.01
HDAC4-206ENST00000460235 WASHC4Q2M389 1173 aa15.13■□□□□ 0.01
HDAC4-206ENST00000460235 C15orf52Q6ZUT6 534 aaKnown RBP15.13■□□□□ 0.01
HDAC4-206ENST00000460235 ZNF804AQ7Z570 1209 aa15.13■□□□□ 0.01
HDAC4-206ENST00000460235 AACSQ86V21 672 aa15.13■□□□□ 0.01
HDAC4-206ENST00000460235 PELP1Q8IZL8 1130 aaKnown RBP15.13■□□□□ 0.01
HDAC4-206ENST00000460235 VGLL2Q8N8G2 317 aa15.13■□□□□ 0.01
HDAC4-206ENST00000460235 HELBQ8NG08 1087 aaPredicted RBP15.13■□□□□ 0.01
HDAC4-206ENST00000460235 RTFDC1Q9BY42 306 aaPredicted RBP15.13■□□□□ 0.01
HDAC4-206ENST00000460235 TAOK3Q9H2K8 898 aa15.13■□□□□ 0.01
HDAC4-206ENST00000460235 ZNF219Q9P2Y4 722 aaPredicted RBP15.13■□□□□ 0.01
HDAC4-206ENST00000460235 LTBP3Q9NS15 1303 aa15.13■□□□□ 0.01
HDAC4-206ENST00000460235 A0A1B0GUL7 405 aa15.12■□□□□ 0.01
HDAC4-206ENST00000460235 ERC2O15083 957 aa15.12■□□□□ 0.01
HDAC4-206ENST00000460235 TAF5LO75529 589 aa15.12■□□□□ 0.01
HDAC4-206ENST00000460235 UQCRFS1P1P0C7P4 283 aa15.12■□□□□ 0.01
HDAC4-206ENST00000460235 TBC1D16Q8TBP0 767 aa15.12■□□□□ 0.01
HDAC4-206ENST00000460235 KDM2BQ8NHM5 1336 aa15.12■□□□□ 0.01
HDAC4-206ENST00000460235 FGFR2P21802 821 aa15.11■□□□□ 0.01
HDAC4-206ENST00000460235 ARHGAP27Q6ZUM4 889 aa15.11■□□□□ 0.01
HDAC4-206ENST00000460235 IL1RAPL2Q9NP60 686 aa15.11■□□□□ 0.01
HDAC4-206ENST00000460235 MED23Q9ULK4 1368 aa15.11■□□□□ 0.01
HDAC4-206ENST00000460235 SEMA3EO15041 775 aa15.1■□□□□ 0.01
HDAC4-206ENST00000460235 FRAT2O75474 233 aaPredicted RBP15.1■□□□□ 0.01
HDAC4-206ENST00000460235 HIBADHP31937 336 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms