RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.56□□□□□ -0.4
HERC4-207ENST00000460168 PDE8AO60658 829 aa12.55□□□□□ -0.4
HERC4-207ENST00000460168 CSF1RP07333 972 aa12.55□□□□□ -0.4
HERC4-207ENST00000460168 TFCP2Q12800 502 aa12.55□□□□□ -0.4
HERC4-207ENST00000460168 PI4K2BQ8TCG2 481 aa12.55□□□□□ -0.4
HERC4-207ENST00000460168 FBXO41Q8TF61 875 aa12.55□□□□□ -0.4
HERC4-207ENST00000460168 CCDC8Q9H0W5 538 aaPredicted RBP12.55□□□□□ -0.4
HERC4-207ENST00000460168 LRRC4BQ9NT99 713 aa12.55□□□□□ -0.4
HERC4-207ENST00000460168 ECHDC1Q9NTX5 307 aa12.55□□□□□ -0.4
HERC4-207ENST00000460168 IL15P40933 162 aaPredicted RBP12.54□□□□□ -0.4
HERC4-207ENST00000460168 CEP120Q8N960 986 aa12.54□□□□□ -0.4
HERC4-207ENST00000460168 TTLL11Q8NHH1 800 aa12.54□□□□□ -0.4
HERC4-207ENST00000460168 TRIM44Q96DX7 344 aaPredicted RBP12.54□□□□□ -0.4
HERC4-207ENST00000460168 NARFQ9UHQ1 456 aa12.54□□□□□ -0.4
HERC4-207ENST00000460168 SCN7AQ01118 1682 aa12.54□□□□□ -0.4
HERC4-207ENST00000460168 USP42Q9H9J4 1324 aaKnown RBP12.54□□□□□ -0.4
HERC4-207ENST00000460168 EYA2O00167 538 aa12.54□□□□□ -0.4
HERC4-207ENST00000460168 GLRX3O76003 335 aaKnown RBP12.54□□□□□ -0.4
HERC4-207ENST00000460168 SLC27A3Q5K4L6 730 aa12.54□□□□□ -0.4
HERC4-207ENST00000460168 USPL1Q5W0Q7 1092 aa12.54□□□□□ -0.4
HERC4-207ENST00000460168 BICDL1Q6ZP65 573 aa12.54□□□□□ -0.4
HERC4-207ENST00000460168 TBC1D32Q96NH3 1257 aa12.54□□□□□ -0.4
HERC4-207ENST00000460168 TUBGCP6Q96RT7 1819 aa12.53□□□□□ -0.4
HERC4-207ENST00000460168 HCLS1P14317 486 aaPredicted RBP12.53□□□□□ -0.4
HERC4-207ENST00000460168 ITGA6P23229 1130 aa12.53□□□□□ -0.4
HERC4-207ENST00000460168 LRRC24Q50LG9 513 aa12.53□□□□□ -0.4
HERC4-207ENST00000460168 TNNI3KQ59H18 835 aa12.53□□□□□ -0.4
HERC4-207ENST00000460168 ATG9AQ7Z3C6 839 aa12.53□□□□□ -0.4
HERC4-207ENST00000460168 C22orf23Q9BZE7 217 aa12.53□□□□□ -0.4
HERC4-207ENST00000460168 GREM2Q9H772 168 aa12.53□□□□□ -0.4
HERC4-207ENST00000460168 SRP68Q9UHB9 627 aaKnown RBP12.53□□□□□ -0.4
HERC4-207ENST00000460168 FPGT-TNNI3KV9GXZ4 949 aa12.53□□□□□ -0.4
HERC4-207ENST00000460168 ANKRD18BA2A2Z9 1011 aa12.53□□□□□ -0.4
HERC4-207ENST00000460168 RGL2O15211 777 aa12.53□□□□□ -0.4
HERC4-207ENST00000460168 CIAO1O76071 339 aa12.53□□□□□ -0.4
HERC4-207ENST00000460168 NTSR2O95665 410 aa12.53□□□□□ -0.4
HERC4-207ENST00000460168 MAP4K4O95819 1239 aaPredicted RBP12.53□□□□□ -0.4
HERC4-207ENST00000460168 RFC4P35249 363 aa12.53□□□□□ -0.4
HERC4-207ENST00000460168 TRAPPC3LQ5T215 181 aa12.53□□□□□ -0.4
HERC4-207ENST00000460168 CNTROBQ8N137 903 aa12.53□□□□□ -0.4
HERC4-207ENST00000460168 ARHGEF1Q92888 912 aaKnown RBP12.53□□□□□ -0.4
HERC4-207ENST00000460168 TLR7Q9NYK1 1049 aaKnown RBP12.53□□□□□ -0.4
HERC4-207ENST00000460168 AMIGO3Q86WK7 504 aa12.52□□□□□ -0.41
HERC4-207ENST00000460168 PUS3Q9BZE2 481 aaKnown RBP12.52□□□□□ -0.41
HERC4-207ENST00000460168 AK9Q5TCS8 1911 aa12.52□□□□□ -0.41
HERC4-207ENST00000460168 ANAPC15P60006 121 aa12.52□□□□□ -0.41
HERC4-207ENST00000460168 TBC1D9BQ66K14 1250 aa12.52□□□□□ -0.41
HERC4-207ENST00000460168 NBPF20Q3BBV1 942 aa12.51□□□□□ -0.41
HERC4-207ENST00000460168 LDHAL6AQ6ZMR3 332 aa12.51□□□□□ -0.41
HERC4-207ENST00000460168 SETDB2Q96T68 719 aa12.51□□□□□ -0.41
HERC4-207ENST00000460168 BCL2L12Q9HB09 334 aa12.51□□□□□ -0.41
HERC4-207ENST00000460168 CEP126Q9P2H0 1117 aa12.51□□□□□ -0.41
HERC4-207ENST00000460168 MAFGO15525 162 aa12.5□□□□□ -0.41
HERC4-207ENST00000460168 MAPK8IP2Q13387 824 aaPredicted RBP12.5□□□□□ -0.41
HERC4-207ENST00000460168 TXNRD1Q16881 649 aa12.5□□□□□ -0.41
HERC4-207ENST00000460168 NEUROD6Q96NK8 337 aa12.5□□□□□ -0.41
HERC4-207ENST00000460168 YY1AP1Q9H869 796 aa12.5□□□□□ -0.41
HERC4-207ENST00000460168 RGS17Q9UGC6 210 aaPredicted RBP12.5□□□□□ -0.41
HERC4-207ENST00000460168 DBNLQ9UJU6 430 aaKnown RBP12.5□□□□□ -0.41
HERC4-207ENST00000460168 C4AP0C0L4 1744 aa12.5□□□□□ -0.41
HERC4-207ENST00000460168 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.5□□□□□ -0.41
HERC4-207ENST00000460168 APBA3O96018 575 aa12.5□□□□□ -0.41
HERC4-207ENST00000460168 HMGB2P26583 209 aaKnown RBP12.5□□□□□ -0.41
HERC4-207ENST00000460168 CCDC152Q4G0S7 254 aa12.5□□□□□ -0.41
HERC4-207ENST00000460168 DNTTIP2Q5QJE6 756 aaKnown RBP12.5□□□□□ -0.41
HERC4-207ENST00000460168 CNNM1Q9NRU3 951 aa12.5□□□□□ -0.41
HERC4-207ENST00000460168 DDX60Q8IY21 1712 aaKnown RBP12.49□□□□□ -0.41
HERC4-207ENST00000460168 REC8O95072 547 aa12.49□□□□□ -0.41
HERC4-207ENST00000460168 POTEAQ6S8J7 498 aa12.49□□□□□ -0.41
HERC4-207ENST00000460168 EGFL6Q8IUX8 553 aa12.49□□□□□ -0.41
HERC4-207ENST00000460168 GPATCH11Q8N954 259 aa12.49□□□□□ -0.41
HERC4-207ENST00000460168 NYXQ9GZU5 481 aa12.49□□□□□ -0.41
HERC4-207ENST00000460168 GPR108Q9NPR9 543 aa12.49□□□□□ -0.41
HERC4-207ENST00000460168 NPHP1O15259 732 aa12.49□□□□□ -0.41
HERC4-207ENST00000460168 CHMLP26374 656 aa12.49□□□□□ -0.41
HERC4-207ENST00000460168 ERFEQ4G0M1 354 aa12.49□□□□□ -0.41
HERC4-207ENST00000460168 NBPF5PQ86XG9 351 aaPredicted RBP12.49□□□□□ -0.41
HERC4-207ENST00000460168 DBNDD2Q9BQY9 259 aa12.49□□□□□ -0.41
HERC4-207ENST00000460168 BOLA2Q9H3K6 86 aa12.49□□□□□ -0.41
HERC4-207ENST00000460168 LAMB2P55268 1798 aa12.48□□□□□ -0.41
HERC4-207ENST00000460168 UBR3Q6ZT12 1888 aa12.48□□□□□ -0.41
HERC4-207ENST00000460168 A0A1B0GUL7 405 aa12.48□□□□□ -0.41
HERC4-207ENST00000460168 TIMM10P62072 90 aa12.48□□□□□ -0.41
HERC4-207ENST00000460168 METTL24Q5JXM2 366 aa12.48□□□□□ -0.41
HERC4-207ENST00000460168 AKAP2Q9Y2D5 859 aa12.48□□□□□ -0.41
HERC4-207ENST00000460168 ZNF609O15014 1411 aa12.48□□□□□ -0.41
HERC4-207ENST00000460168 PLSCR1O15162 318 aa12.47□□□□□ -0.41
HERC4-207ENST00000460168 SSFA2P28290 1259 aa12.47□□□□□ -0.41
HERC4-207ENST00000460168 RBM25P49756 843 aaKnown RBP12.47□□□□□ -0.41
HERC4-207ENST00000460168 PROM2Q8N271 834 aa12.47□□□□□ -0.41
HERC4-207ENST00000460168 EVI5LQ96CN4 794 aa12.47□□□□□ -0.41
HERC4-207ENST00000460168 MPHOSPH8Q99549 860 aa12.47□□□□□ -0.41
HERC4-207ENST00000460168 RIPOR2Q9Y4F9 1068 aa12.47□□□□□ -0.41
HERC4-207ENST00000460168 ATP5JP18859 108 aa12.47□□□□□ -0.41
HERC4-207ENST00000460168 TPTE2Q6XPS3 522 aa12.47□□□□□ -0.41
HERC4-207ENST00000460168 LETM1O95202 739 aaPredicted RBP12.46□□□□□ -0.41
HERC4-207ENST00000460168 MTERF4Q7Z6M4 381 aaKnown RBP12.46□□□□□ -0.41
HERC4-207ENST00000460168 ESYT1Q9BSJ8 1104 aa12.46□□□□□ -0.41
HERC4-207ENST00000460168 GTPBP4Q9BZE4 634 aaKnown RBP12.46□□□□□ -0.41
HERC4-207ENST00000460168 SEC31BQ9NQW1 1179 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms