RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 CFAP70Q5T0N1 1121 aa10.09□□□□□ -0.79
SHROOM4-203ENST00000460112 FSIP1Q8NA03 581 aa10.09□□□□□ -0.79
SHROOM4-203ENST00000460112 PIP4K2BP78356 416 aa10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 SH3BP5O60239 455 aa10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 DBF4Q9UBU7 674 aaPredicted RBP10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 PSMC4P43686 418 aa10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 USH1CQ9Y6N9 552 aa10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 CCDC152Q4G0S7 254 aa10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 CKAP2LQ8IYA6 745 aa10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 ZFYP08048 801 aaPredicted RBP10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 PLCG2P16885 1265 aa10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 STAT6P42226 847 aa10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 TAF12Q16514 161 aa10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 CFAP58Q5T655 872 aa10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 C6orf50Q9HD87 102 aa10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 PIK3R4Q99570 1358 aa10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 TSPY2A6NKD2 308 aa10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 CFAP157Q5JU67 520 aa10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 DUSP27Q5VZP5 1158 aa10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 CCDC129Q6ZRS4 1044 aa10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 GSTA5Q7RTV2 222 aa10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 SNX21Q969T3 373 aa10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 SPAG5Q96R06 1193 aa10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 SCAF11Q99590 1463 aaKnown RBP10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 TTC31Q49AM3 519 aaPredicted RBP10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 CACYBPQ9HB71 228 aaKnown RBP10.08□□□□□ -0.8
SHROOM4-203ENST00000460112 MYH10P35580 1976 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 SLFN5Q08AF3 891 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 TRERF1Q96PN7 1200 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 CWC25Q9NXE8 425 aaPredicted RBP10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 NOC2LQ9Y3T9 749 aaKnown RBP10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 STK24Q9Y6E0 443 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 ZNF804AQ7Z570 1209 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 CROCCP2Q86T23 111 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 NUTM1Q86Y26 1132 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 KCNG4Q8TDN1 519 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 CCDC94Q9BW85 323 aaPredicted RBP10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 TSPY3P0CV98 308 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 TSPY8P0CW00 308 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 CLUL1Q15846 466 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 TMC6Q7Z403 805 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 C16orf71Q8IYS4 520 aaPredicted RBP10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 SLC8A3P57103 927 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 ARFGAP2Q8N6H7 521 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 MYD88Q99836 296 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 UHRF1BP1Q6BDS2 1440 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 AKR1B10O60218 316 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 CALM1P0DP23 149 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 CALM2P0DP24 149 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 CALM3P0DP25 149 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 HOXA7P31268 230 aaPredicted RBP10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 KRT83P78385 493 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 CSRNP2Q9H175 543 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 GON4LQ3T8J9 2241 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 NCAPGQ9BPX3 1015 aa10.07□□□□□ -0.8
SHROOM4-203ENST00000460112 IDEP14735 1019 aa10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 DNA2P51530 1060 aa10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 PLCD3Q8N3E9 789 aa10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 SUDS3Q9H7L9 328 aaPredicted RBP10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 HDAC1Q13547 482 aaPredicted RBP10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 CCDC63Q8NA47 563 aa10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 STIM2Q9P246 746 aa10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 TACC1O75410 805 aa10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 PPP1R2P41236 205 aa10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 C6orf229H3BNL8 230 aa10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 GNAT2P19087 354 aa10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 OGFOD1Q8N543 542 aa10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 CCT6BQ92526 530 aa10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 CTAGE9A4FU28 777 aa10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 STK10O94804 968 aaKnown RBP10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 SETDB1Q15047 1291 aa10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 MAK16Q9BXY0 300 aaKnown RBP10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 IL1RAPL2Q9NP60 686 aa10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 MTRF1LQ9UGC7 380 aaKnown RBP10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.06□□□□□ -0.8
SHROOM4-203ENST00000460112 PSMA7O14818 248 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 CRCPO75575 148 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 ZBTB16Q05516 673 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 INTS4Q96HW7 963 aaKnown RBP10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 TRIM7Q9C029 511 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 CIB2O75838 187 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 FAM13AO94988 1023 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 ESR2Q92731 530 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 CCDC61Q9Y6R9 512 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 VTI1AQ96AJ9 217 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 SH2D4AQ9H788 454 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 RAPGEF6Q8TEU7 1601 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 SRGAP1Q7Z6B7 1085 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 CTAGE15A4D2H0 777 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 N4BP3O15049 544 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 CTAGE8P0CG41 777 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 CALML3P27482 149 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 CTAGE6Q86UF2 777 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 CTAGE4Q8IX94 777 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 CCDC144CPQ8IYA2 1237 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 RPUSD2Q8IZ73 545 aaKnown RBP10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 GPR161Q8N6U8 529 aaKnown RBP10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 MRVI1Q9Y6F6 885 aa10.05□□□□□ -0.8
SHROOM4-203ENST00000460112 CCDC50Q8IVM0 306 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms