RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 BSDC1Q9NW68 430 aaPredicted RBP20.45■□□□□ 0.86
COL7A1-203ENST00000459756 CLEC11AQ9Y240 323 aa20.45■□□□□ 0.86
COL7A1-203ENST00000459756 XDHP47989 1333 aa20.45■□□□□ 0.86
COL7A1-203ENST00000459756 YDJCA8MPS7 323 aa20.44■□□□□ 0.86
COL7A1-203ENST00000459756 GRM8O00222 908 aa20.44■□□□□ 0.86
COL7A1-203ENST00000459756 RAD17O75943 681 aa20.44■□□□□ 0.86
COL7A1-203ENST00000459756 EPS15P42566 896 aa20.44■□□□□ 0.86
COL7A1-203ENST00000459756 SSH1Q8WYL5 1049 aa20.44■□□□□ 0.86
COL7A1-203ENST00000459756 GPRC5DQ9NZD1 345 aa20.44■□□□□ 0.86
COL7A1-203ENST00000459756 PTPRCP08575 1304 aa20.44■□□□□ 0.86
COL7A1-203ENST00000459756 ITGA6P23229 1130 aa20.43■□□□□ 0.86
COL7A1-203ENST00000459756 IGHMBP2P38935 993 aaKnown RBP20.43■□□□□ 0.86
COL7A1-203ENST00000459756 GMPSP49915 693 aaPredicted RBP20.43■□□□□ 0.86
COL7A1-203ENST00000459756 FAM161AQ3B820 660 aa20.43■□□□□ 0.86
COL7A1-203ENST00000459756 USP50Q70EL3 339 aaPredicted RBP20.43■□□□□ 0.86
COL7A1-203ENST00000459756 SRCIN1Q9C0H9 1055 aa20.43■□□□□ 0.86
COL7A1-203ENST00000459756 DBNDD1Q9H9R9 158 aa20.43■□□□□ 0.86
COL7A1-203ENST00000459756 SPEF2Q9C093 1822 aa20.43■□□□□ 0.86
COL7A1-203ENST00000459756 CT47B1P0C2W7 299 aaPredicted RBP20.42■□□□□ 0.86
COL7A1-203ENST00000459756 ATP2B4P23634 1241 aa20.42■□□□□ 0.86
COL7A1-203ENST00000459756 HTRA3P83110 453 aa20.42■□□□□ 0.86
COL7A1-203ENST00000459756 ALDH1L2Q3SY69 923 aa20.42■□□□□ 0.86
COL7A1-203ENST00000459756 MIER1Q8N108 512 aa20.42■□□□□ 0.86
COL7A1-203ENST00000459756 GPR101Q96P66 508 aaPredicted RBP20.42■□□□□ 0.86
COL7A1-203ENST00000459756 C9orf78Q9NZ63 289 aaPredicted RBP20.42■□□□□ 0.86
COL7A1-203ENST00000459756 MINPP1Q9UNW1 487 aa20.42■□□□□ 0.86
COL7A1-203ENST00000459756 ECE2O60344 883 aa20.41■□□□□ 0.86
COL7A1-203ENST00000459756 FOXO4P98177 505 aa20.41■□□□□ 0.86
COL7A1-203ENST00000459756 DOK7Q18PE1 504 aa20.41■□□□□ 0.86
COL7A1-203ENST00000459756 BCL2L13Q9BXK5 485 aa20.41■□□□□ 0.86
COL7A1-203ENST00000459756 ADARB2Q9NS39 739 aaKnown RBP20.41■□□□□ 0.86
COL7A1-203ENST00000459756 G3V3G9 751 aa20.4■□□□□ 0.86
COL7A1-203ENST00000459756 DCAF8Q5TAQ9 597 aa20.4■□□□□ 0.86
COL7A1-203ENST00000459756 PASKQ96RG2 1323 aa20.4■□□□□ 0.86
COL7A1-203ENST00000459756 MPHOSPH8Q99549 860 aa20.4■□□□□ 0.86
COL7A1-203ENST00000459756 ANKRD18BA2A2Z9 1011 aa20.39■□□□□ 0.85
COL7A1-203ENST00000459756 ITGBL1O95965 494 aaPredicted RBP20.39■□□□□ 0.85
COL7A1-203ENST00000459756 CNTROBQ8N137 903 aa20.39■□□□□ 0.85
COL7A1-203ENST00000459756 KLRG1Q96E93 195 aa20.39■□□□□ 0.85
COL7A1-203ENST00000459756 PSMD14O00487 310 aa20.38■□□□□ 0.85
COL7A1-203ENST00000459756 IFIT5Q13325 482 aaKnown RBP20.38■□□□□ 0.85
COL7A1-203ENST00000459756 MAP1SQ66K74 1059 aaPredicted RBP20.38■□□□□ 0.85
COL7A1-203ENST00000459756 DPF2Q92785 391 aa20.38■□□□□ 0.85
COL7A1-203ENST00000459756 ANKRD2Q9GZV1 360 aa20.38■□□□□ 0.85
COL7A1-203ENST00000459756 CREBZFQ9NS37 354 aa20.38■□□□□ 0.85
COL7A1-203ENST00000459756 SMC4Q9NTJ3 1288 aa20.38■□□□□ 0.85
COL7A1-203ENST00000459756 MED23Q9ULK4 1368 aa20.37■□□□□ 0.85
COL7A1-203ENST00000459756 RPS12P25398 132 aaKnown RBP20.37■□□□□ 0.85
COL7A1-203ENST00000459756 CCT4P50991 539 aaKnown RBP20.37■□□□□ 0.85
COL7A1-203ENST00000459756 LMBR1LQ6UX01 489 aa20.37■□□□□ 0.85
COL7A1-203ENST00000459756 CNOT7Q9UIV1 285 aaKnown RBP20.37■□□□□ 0.85
COL7A1-203ENST00000459756 LEMD3Q9Y2U8 911 aa20.37■□□□□ 0.85
COL7A1-203ENST00000459756 CHMP3Q9Y3E7 222 aa20.37■□□□□ 0.85
COL7A1-203ENST00000459756 UTYO14607 1347 aa20.36■□□□□ 0.85
COL7A1-203ENST00000459756 H7C1D1 291 aa20.36■□□□□ 0.85
COL7A1-203ENST00000459756 EPHA10Q5JZY3 1008 aa20.36■□□□□ 0.85
COL7A1-203ENST00000459756 KCNQ5Q9NR82 932 aa20.36■□□□□ 0.85
COL7A1-203ENST00000459756 SCN9AQ15858 1988 aa20.35■□□□□ 0.85
COL7A1-203ENST00000459756 CCDC57Q2TAC2 916 aa20.35■□□□□ 0.85
COL7A1-203ENST00000459756 MICALL2Q8IY33 904 aa20.35■□□□□ 0.85
COL7A1-203ENST00000459756 ZBTB12Q9Y330 459 aaPredicted RBP20.35■□□□□ 0.85
COL7A1-203ENST00000459756 WTIPA6NIX2 430 aaPredicted RBP20.34■□□□□ 0.85
COL7A1-203ENST00000459756 VIL1P09327 827 aaKnown RBP20.34■□□□□ 0.85
COL7A1-203ENST00000459756 NBPF7P0C2Y1 421 aaPredicted RBP20.34■□□□□ 0.85
COL7A1-203ENST00000459756 PODNQ7Z5L7 613 aa20.34■□□□□ 0.85
COL7A1-203ENST00000459756 ZNF804BA4D1E1 1349 aa20.33■□□□□ 0.85
COL7A1-203ENST00000459756 BRPF1P55201 1214 aaPredicted RBP20.33■□□□□ 0.85
COL7A1-203ENST00000459756 CHRNDQ07001 517 aa20.33■□□□□ 0.85
COL7A1-203ENST00000459756 ZC3H15Q8WU90 426 aaKnown RBP20.33■□□□□ 0.85
COL7A1-203ENST00000459756 SUCLG2Q96I99 432 aa20.33■□□□□ 0.85
COL7A1-203ENST00000459756 PSME4Q14997 1843 aa20.32■□□□□ 0.84
COL7A1-203ENST00000459756 TMEM88BA6NKF7 163 aa20.32■□□□□ 0.84
COL7A1-203ENST00000459756 TAF7LQ5H9L4 462 aa20.32■□□□□ 0.84
COL7A1-203ENST00000459756 JMYQ8N9B5 988 aa20.32■□□□□ 0.84
COL7A1-203ENST00000459756 KAZALD1Q96I82 304 aa20.32■□□□□ 0.84
COL7A1-203ENST00000459756 PGAP2Q9UHJ9 254 aa20.32■□□□□ 0.84
COL7A1-203ENST00000459756 ZNF609O15014 1411 aa20.32■□□□□ 0.84
COL7A1-203ENST00000459756 SHTN1A0MZ66 631 aa20.31■□□□□ 0.84
COL7A1-203ENST00000459756 KCNJ4P48050 445 aa20.31■□□□□ 0.84
COL7A1-203ENST00000459756 TRPM4Q8TD43 1214 aa20.31■□□□□ 0.84
COL7A1-203ENST00000459756 COA1Q9GZY4 146 aa20.31■□□□□ 0.84
COL7A1-203ENST00000459756 PCNTO95613 3336 aa20.31■□□□□ 0.84
COL7A1-203ENST00000459756 USP17L3A6NCW0 530 aa20.3■□□□□ 0.84
COL7A1-203ENST00000459756 USP17L4A6NCW7 530 aa20.3■□□□□ 0.84
COL7A1-203ENST00000459756 HIRAP54198 1017 aaPredicted RBP20.3■□□□□ 0.84
COL7A1-203ENST00000459756 RSBN1LQ6PCB5 846 aaPredicted RBP20.3■□□□□ 0.84
COL7A1-203ENST00000459756 LDHAL6AQ6ZMR3 332 aa20.3■□□□□ 0.84
COL7A1-203ENST00000459756 USP17L1Q7RTZ2 530 aa20.3■□□□□ 0.84
COL7A1-203ENST00000459756 AGBL3Q8NEM8 1001 aa20.3■□□□□ 0.84
COL7A1-203ENST00000459756 USP44Q9H0E7 712 aa20.3■□□□□ 0.84
COL7A1-203ENST00000459756 RARSP54136 660 aaKnown RBP20.29■□□□□ 0.84
COL7A1-203ENST00000459756 HNRNPUQ00839 825 aaKnown RBP eCLIP20.29■□□□□ 0.84
COL7A1-203ENST00000459756 RABL6Q3YEC7 729 aaPredicted RBP20.29■□□□□ 0.84
COL7A1-203ENST00000459756 SAMD7Q7Z3H4 446 aa20.29■□□□□ 0.84
COL7A1-203ENST00000459756 ZNF594Q96JF6 807 aaPredicted RBP20.29■□□□□ 0.84
COL7A1-203ENST00000459756 API5Q9BZZ5 524 aaKnown RBP20.29■□□□□ 0.84
COL7A1-203ENST00000459756 BICC1Q9H694 974 aaKnown RBP20.29■□□□□ 0.84
COL7A1-203ENST00000459756 CNNM1Q9NRU3 951 aa20.29■□□□□ 0.84
COL7A1-203ENST00000459756 NOB1Q9ULX3 412 aaKnown RBP20.29■□□□□ 0.84
COL7A1-203ENST00000459756 A0A1B0GUL6 1792 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms