RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 CCDC85CA6NKD9 419 aa13.53□□□□□ -0.24
HDLBP-227ENST00000458564 FAM155AB1AL88 458 aaPredicted RBP13.53□□□□□ -0.24
HDLBP-227ENST00000458564 RIMBP2O15034 1052 aa13.53□□□□□ -0.24
HDLBP-227ENST00000458564 GOLGA2Q08379 1002 aa13.53□□□□□ -0.24
HDLBP-227ENST00000458564 RTL5Q5HYW3 569 aaPredicted RBP13.53□□□□□ -0.24
HDLBP-227ENST00000458564 RGMBQ6NW40 437 aa13.53□□□□□ -0.24
HDLBP-227ENST00000458564 CCDC191Q8NCU4 936 aa13.53□□□□□ -0.24
HDLBP-227ENST00000458564 MCOLN1Q9GZU1 580 aa13.53□□□□□ -0.24
HDLBP-227ENST00000458564 GBA2Q9HCG7 927 aaPredicted RBP13.53□□□□□ -0.24
HDLBP-227ENST00000458564 KCNQ5Q9NR82 932 aa13.53□□□□□ -0.24
HDLBP-227ENST00000458564 IFT57Q9NWB7 429 aa13.53□□□□□ -0.24
HDLBP-227ENST00000458564 SAGE1Q9NXZ1 904 aa13.53□□□□□ -0.24
HDLBP-227ENST00000458564 SCN9AQ15858 1988 aa13.52□□□□□ -0.24
HDLBP-227ENST00000458564 DDX10Q13206 875 aaKnown RBP13.52□□□□□ -0.25
HDLBP-227ENST00000458564 DOK7Q18PE1 504 aa13.52□□□□□ -0.25
HDLBP-227ENST00000458564 KIF4BQ2VIQ3 1234 aa13.52□□□□□ -0.25
HDLBP-227ENST00000458564 DLK2Q6UY11 383 aa13.52□□□□□ -0.25
HDLBP-227ENST00000458564 RIC3Q7Z5B4 369 aa13.52□□□□□ -0.25
HDLBP-227ENST00000458564 DCPSQ96C86 337 aaKnown RBP13.52□□□□□ -0.25
HDLBP-227ENST00000458564 ZIC5Q96T25 663 aa13.52□□□□□ -0.25
HDLBP-227ENST00000458564 ZC3H12CQ9C0D7 883 aaKnown RBP13.52□□□□□ -0.25
HDLBP-227ENST00000458564 ADM5C9JUS6 153 aa13.51□□□□□ -0.25
HDLBP-227ENST00000458564 UFL1O94874 794 aa13.51□□□□□ -0.25
HDLBP-227ENST00000458564 PCCAP05165 728 aaPredicted RBP13.51□□□□□ -0.25
HDLBP-227ENST00000458564 ZNF280AP59817 542 aaPredicted RBP13.51□□□□□ -0.25
HDLBP-227ENST00000458564 MLLT1Q03111 559 aaPredicted RBP13.51□□□□□ -0.25
HDLBP-227ENST00000458564 CALD1Q05682 793 aaKnown RBP13.51□□□□□ -0.25
HDLBP-227ENST00000458564 CCDC152Q4G0S7 254 aa13.51□□□□□ -0.25
HDLBP-227ENST00000458564 C2orf69Q8N8R5 385 aa13.51□□□□□ -0.25
HDLBP-227ENST00000458564 CCDC102AQ96A19 550 aa13.51□□□□□ -0.25
HDLBP-227ENST00000458564 SEC31BQ9NQW1 1179 aa13.51□□□□□ -0.25
HDLBP-227ENST00000458564 GGA3Q9NZ52 723 aa13.51□□□□□ -0.25
HDLBP-227ENST00000458564 GGA1Q9UJY5 639 aa13.51□□□□□ -0.25
HDLBP-227ENST00000458564 PDE8AO60658 829 aa13.5□□□□□ -0.25
HDLBP-227ENST00000458564 GNAI1P63096 354 aa13.5□□□□□ -0.25
HDLBP-227ENST00000458564 SULF1Q8IWU6 871 aa13.5□□□□□ -0.25
HDLBP-227ENST00000458564 AGBL3Q8NEM8 1001 aa13.5□□□□□ -0.25
HDLBP-227ENST00000458564 PHAXQ9H814 394 aaKnown RBP13.5□□□□□ -0.25
HDLBP-227ENST00000458564 ANKIB1Q9P2G1 1089 aa13.5□□□□□ -0.25
HDLBP-227ENST00000458564 CASP8AP2Q9UKL3 1982 aa13.5□□□□□ -0.25
HDLBP-227ENST00000458564 PSME4Q14997 1843 aa13.5□□□□□ -0.25
HDLBP-227ENST00000458564 XDHP47989 1333 aa13.49□□□□□ -0.25
HDLBP-227ENST00000458564 SLC34A2O95436 690 aa13.49□□□□□ -0.25
HDLBP-227ENST00000458564 SLC10A3P09131 477 aa13.49□□□□□ -0.25
HDLBP-227ENST00000458564 RBM26Q5T8P6 1007 aaKnown RBP13.49□□□□□ -0.25
HDLBP-227ENST00000458564 RSBN1LQ6PCB5 846 aaPredicted RBP13.49□□□□□ -0.25
HDLBP-227ENST00000458564 GMLQ99445 158 aa13.49□□□□□ -0.25
HDLBP-227ENST00000458564 MYD88Q99836 296 aa13.49□□□□□ -0.25
HDLBP-227ENST00000458564 CHMP4AQ9BY43 222 aa13.49□□□□□ -0.25
HDLBP-227ENST00000458564 CWC25Q9NXE8 425 aaPredicted RBP13.49□□□□□ -0.25
HDLBP-227ENST00000458564 PITPNM2Q9BZ72 1349 aa13.48□□□□□ -0.25
HDLBP-227ENST00000458564 DDX58O95786 925 aaKnown RBP13.48□□□□□ -0.25
HDLBP-227ENST00000458564 ZNF157P51786 506 aaPredicted RBP13.48□□□□□ -0.25
HDLBP-227ENST00000458564 FKBP1BP68106 108 aa13.48□□□□□ -0.25
HDLBP-227ENST00000458564 DGKZQ13574 1117 aa13.48□□□□□ -0.25
HDLBP-227ENST00000458564 CDCA5Q96FF9 252 aa13.48□□□□□ -0.25
HDLBP-227ENST00000458564 METTL22Q9BUU2 404 aaPredicted RBP13.48□□□□□ -0.25
HDLBP-227ENST00000458564 PRKRIP1Q9H875 184 aaPredicted RBP13.48□□□□□ -0.25
HDLBP-227ENST00000458564 POLR2AP24928 1970 aaKnown RBP13.48□□□□□ -0.25
HDLBP-227ENST00000458564 ASTN2O75129 1339 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-227ENST00000458564 G3V3G9 751 aa13.47□□□□□ -0.25
HDLBP-227ENST00000458564 APAF1O14727 1248 aa13.47□□□□□ -0.25
HDLBP-227ENST00000458564 KIF23Q02241 960 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-227ENST00000458564 DCAF8Q5TAQ9 597 aa13.47□□□□□ -0.25
HDLBP-227ENST00000458564 PODNQ7Z5L7 613 aa13.47□□□□□ -0.25
HDLBP-227ENST00000458564 ANKRD18AQ8IVF6 992 aa13.47□□□□□ -0.25
HDLBP-227ENST00000458564 PAPPA2Q9BXP8 1791 aa13.47□□□□□ -0.25
HDLBP-227ENST00000458564 MED23Q9ULK4 1368 aa13.46□□□□□ -0.25
HDLBP-227ENST00000458564 USP17L8P0C7I0 530 aa13.46□□□□□ -0.25
HDLBP-227ENST00000458564 ATP2B4P23634 1241 aa13.46□□□□□ -0.25
HDLBP-227ENST00000458564 CTSWP56202 376 aa13.46□□□□□ -0.25
HDLBP-227ENST00000458564 SCARF1Q14162 830 aa13.46□□□□□ -0.25
HDLBP-227ENST00000458564 ANGEL2Q5VTE6 544 aaKnown RBP13.46□□□□□ -0.25
HDLBP-227ENST00000458564 CCDC30Q5VVM6 783 aa13.46□□□□□ -0.25
HDLBP-227ENST00000458564 REM2Q8IYK8 340 aaPredicted RBP13.46□□□□□ -0.25
HDLBP-227ENST00000458564 C8orf58Q8NAV2 365 aa13.46□□□□□ -0.25
HDLBP-227ENST00000458564 CDC5LQ99459 802 aaKnown RBP13.46□□□□□ -0.25
HDLBP-227ENST00000458564 RNF186Q9NXI6 227 aa13.46□□□□□ -0.25
HDLBP-227ENST00000458564 USP17L3A6NCW0 530 aa13.45□□□□□ -0.26
HDLBP-227ENST00000458564 USP17L4A6NCW7 530 aa13.45□□□□□ -0.26
HDLBP-227ENST00000458564 ELL2O00472 640 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-227ENST00000458564 USP17L1Q7RTZ2 530 aa13.45□□□□□ -0.26
HDLBP-227ENST00000458564 RASAL3Q86YV0 1011 aa13.45□□□□□ -0.26
HDLBP-227ENST00000458564 CSRNP1Q96S65 589 aa13.45□□□□□ -0.26
HDLBP-227ENST00000458564 MYOZ2Q9NPC6 264 aa13.45□□□□□ -0.26
HDLBP-227ENST00000458564 TNRC18O15417 2968 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-227ENST00000458564 TRPA1O75762 1119 aa13.44□□□□□ -0.26
HDLBP-227ENST00000458564 IGKV5-2P06315 115 aa13.44□□□□□ -0.26
HDLBP-227ENST00000458564 TTLL11Q8NHH1 800 aa13.44□□□□□ -0.26
HDLBP-227ENST00000458564 BSDC1Q9NW68 430 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-227ENST00000458564 MAP3K2Q9Y2U5 619 aa13.44□□□□□ -0.26
HDLBP-227ENST00000458564 MMP14P50281 582 aa13.43□□□□□ -0.26
HDLBP-227ENST00000458564 KSR2Q6VAB6 950 aa13.43□□□□□ -0.26
HDLBP-227ENST00000458564 JARID2Q92833 1246 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-227ENST00000458564 CCDC85AQ96PX6 553 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-227ENST00000458564 MINPP1Q9UNW1 487 aa13.43□□□□□ -0.26
HDLBP-227ENST00000458564 ZNF646O15015 1829 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-227ENST00000458564 AKAP11Q9UKA4 1901 aa13.43□□□□□ -0.26
HDLBP-227ENST00000458564 MYO3BQ8WXR4 1341 aa13.42□□□□□ -0.26
HDLBP-227ENST00000458564 PI4KAP2A4QPH2 592 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms