RNA–Protein interactions for RNA: ENST00000458283.5

PCCA-208, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-208ENST00000458283 LMNB1P20700 586 aa12.75□□□□□ -0.37
PCCA-208ENST00000458283 RABL6Q3YEC7 729 aaPredicted RBP12.75□□□□□ -0.37
PCCA-208ENST00000458283 TAF7LQ5H9L4 462 aa12.75□□□□□ -0.37
PCCA-208ENST00000458283 TTLL6Q8N841 843 aa12.75□□□□□ -0.37
PCCA-208ENST00000458283 ZNF594Q96JF6 807 aaPredicted RBP12.75□□□□□ -0.37
PCCA-208ENST00000458283 PLA2G12BQ9BX93 195 aa12.75□□□□□ -0.37
PCCA-208ENST00000458283 GREM2Q9H772 168 aa12.75□□□□□ -0.37
PCCA-208ENST00000458283 DICER1Q9UPY3 1922 aaKnown RBP12.74□□□□□ -0.37
PCCA-208ENST00000458283 H0YIN7 160 aa12.74□□□□□ -0.37
PCCA-208ENST00000458283 SURF6O75683 361 aaKnown RBP12.74□□□□□ -0.37
PCCA-208ENST00000458283 MTX1Q13505 466 aa12.74□□□□□ -0.37
PCCA-208ENST00000458283 DNAJC5GQ8N7S2 189 aa12.74□□□□□ -0.37
PCCA-208ENST00000458283 SMC1BQ8NDV3 1235 aa12.74□□□□□ -0.37
PCCA-208ENST00000458283 SSH3Q8TE77 659 aa12.74□□□□□ -0.37
PCCA-208ENST00000458283 SMARCA5O60264 1052 aaPredicted RBP12.73□□□□□ -0.37
PCCA-208ENST00000458283 HSP90B1P14625 803 aaKnown RBP12.73□□□□□ -0.37
PCCA-208ENST00000458283 ITGA6P23229 1130 aa12.73□□□□□ -0.37
PCCA-208ENST00000458283 HTRA3P83110 453 aa12.73□□□□□ -0.37
PCCA-208ENST00000458283 IFIT5Q13325 482 aaKnown RBP12.73□□□□□ -0.37
PCCA-208ENST00000458283 CCDC57Q2TAC2 916 aa12.73□□□□□ -0.37
PCCA-208ENST00000458283 CCDC152Q4G0S7 254 aa12.73□□□□□ -0.37
PCCA-208ENST00000458283 TTLL11Q8NHH1 800 aa12.73□□□□□ -0.37
PCCA-208ENST00000458283 SEC31BQ9NQW1 1179 aa12.73□□□□□ -0.37
PCCA-208ENST00000458283 FER1L6Q2WGJ9 1857 aa12.72□□□□□ -0.37
PCCA-208ENST00000458283 ANKRD18BA2A2Z9 1011 aa12.72□□□□□ -0.37
PCCA-208ENST00000458283 RFX5P48382 616 aaPredicted RBP12.72□□□□□ -0.37
PCCA-208ENST00000458283 POTEHQ6S545 545 aa12.72□□□□□ -0.37
PCCA-208ENST00000458283 ZNF622Q969S3 477 aaKnown RBP eCLIP12.72□□□□□ -0.37
PCCA-208ENST00000458283 KLRG1Q96E93 195 aa12.72□□□□□ -0.37
PCCA-208ENST00000458283 ZBTB47Q9UFB7 747 aaPredicted RBP12.72□□□□□ -0.37
PCCA-208ENST00000458283 PDZRN3Q9UPQ7 1066 aa12.72□□□□□ -0.37
PCCA-208ENST00000458283 RIC1Q4ADV7 1423 aa12.71□□□□□ -0.37
PCCA-208ENST00000458283 ANKRD45Q5TZF3 282 aa12.71□□□□□ -0.37
PCCA-208ENST00000458283 RPGRQ92834 1020 aaKnown RBP12.71□□□□□ -0.37
PCCA-208ENST00000458283 GCC1Q96CN9 775 aa12.71□□□□□ -0.37
PCCA-208ENST00000458283 NLRP3Q96P20 1036 aa12.71□□□□□ -0.37
PCCA-208ENST00000458283 LNPKQ9C0E8 428 aa12.71□□□□□ -0.37
PCCA-208ENST00000458283 DCTPP1Q9H773 170 aa12.71□□□□□ -0.37
PCCA-208ENST00000458283 TAF1P21675 1872 aa12.7□□□□□ -0.38
PCCA-208ENST00000458283 GLTPD2A6NH11 291 aa12.7□□□□□ -0.38
PCCA-208ENST00000458283 CSF1RP07333 972 aa12.7□□□□□ -0.38
PCCA-208ENST00000458283 VEGFAP15692 232 aaPredicted RBP12.7□□□□□ -0.38
PCCA-208ENST00000458283 PDE6BP35913 854 aa12.7□□□□□ -0.38
PCCA-208ENST00000458283 RGS3P49796 1198 aa12.7□□□□□ -0.38
PCCA-208ENST00000458283 PTPN12Q05209 780 aaKnown RBP12.7□□□□□ -0.38
PCCA-208ENST00000458283 G3BP1Q13283 466 aaKnown RBP eCLIP12.7□□□□□ -0.38
PCCA-208ENST00000458283 SMC5Q8IY18 1101 aa12.7□□□□□ -0.38
PCCA-208ENST00000458283 PUS3Q9BZE2 481 aaKnown RBP12.7□□□□□ -0.38
PCCA-208ENST00000458283 IL1RAPL2Q9NP60 686 aa12.7□□□□□ -0.38
PCCA-208ENST00000458283 NFKBIEO00221 500 aa12.69□□□□□ -0.38
PCCA-208ENST00000458283 LRRC24Q50LG9 513 aa12.69□□□□□ -0.38
PCCA-208ENST00000458283 SLC10A5Q5PT55 438 aa12.69□□□□□ -0.38
PCCA-208ENST00000458283 SLC51AQ86UW1 340 aa12.69□□□□□ -0.38
PCCA-208ENST00000458283 BRIP1Q9BX63 1249 aa12.69□□□□□ -0.38
PCCA-208ENST00000458283 CNNM1Q9NRU3 951 aa12.69□□□□□ -0.38
PCCA-208ENST00000458283 RTL9Q8NET4 1388 aa12.69□□□□□ -0.38
PCCA-208ENST00000458283 SLX4Q8IY92 1834 aa12.68□□□□□ -0.38
PCCA-208ENST00000458283 C21orf2O43822 256 aa12.68□□□□□ -0.38
PCCA-208ENST00000458283 IGHMBP2P38935 993 aaKnown RBP12.68□□□□□ -0.38
PCCA-208ENST00000458283 PRELPP51888 382 aa12.68□□□□□ -0.38
PCCA-208ENST00000458283 SF3B3Q15393 1217 aaKnown RBP12.68□□□□□ -0.38
PCCA-208ENST00000458283 DDX46Q7L014 1031 aaKnown RBP12.68□□□□□ -0.38
PCCA-208ENST00000458283 ANKRD18AQ8IVF6 992 aa12.68□□□□□ -0.38
PCCA-208ENST00000458283 CELF1Q92879 486 aaKnown RBP12.68□□□□□ -0.38
PCCA-208ENST00000458283 CDC5LQ99459 802 aaKnown RBP12.68□□□□□ -0.38
PCCA-208ENST00000458283 LRRCC1Q9C099 1032 aa12.68□□□□□ -0.38
PCCA-208ENST00000458283 COPRSQ9NQ92 184 aa12.68□□□□□ -0.38
PCCA-208ENST00000458283 EYA2O00167 538 aa12.67□□□□□ -0.38
PCCA-208ENST00000458283 NUCB1Q02818 461 aa12.67□□□□□ -0.38
PCCA-208ENST00000458283 TFCP2Q12800 502 aa12.67□□□□□ -0.38
PCCA-208ENST00000458283 HSP90AB4PQ58FF6 505 aa12.67□□□□□ -0.38
PCCA-208ENST00000458283 DPY19L2Q6NUT2 758 aa12.67□□□□□ -0.38
PCCA-208ENST00000458283 CHD1LQ86WJ1 897 aa12.67□□□□□ -0.38
PCCA-208ENST00000458283 ERC1Q8IUD2 1116 aa12.67□□□□□ -0.38
PCCA-208ENST00000458283 JMYQ8N9B5 988 aa12.67□□□□□ -0.38
PCCA-208ENST00000458283 RHPN1Q8TCX5 695 aa12.67□□□□□ -0.38
PCCA-208ENST00000458283 OTUD7AQ8TE49 926 aaPredicted RBP12.67□□□□□ -0.38
PCCA-208ENST00000458283 MPHOSPH8Q99549 860 aa12.67□□□□□ -0.38
PCCA-208ENST00000458283 ZNF609O15014 1411 aa12.66□□□□□ -0.38
PCCA-208ENST00000458283 RAB11FIP3O75154 756 aa12.66□□□□□ -0.38
PCCA-208ENST00000458283 PDE4AP27815 886 aa12.66□□□□□ -0.38
PCCA-208ENST00000458283 METTL24Q5JXM2 366 aa12.66□□□□□ -0.38
PCCA-208ENST00000458283 LDHAL6AQ6ZMR3 332 aa12.66□□□□□ -0.38
PCCA-208ENST00000458283 ATG9AQ7Z3C6 839 aa12.66□□□□□ -0.38
PCCA-208ENST00000458283 HELBQ8NG08 1087 aaPredicted RBP12.66□□□□□ -0.38
PCCA-208ENST00000458283 KIF1BPQ96EK5 621 aa12.66□□□□□ -0.38
PCCA-208ENST00000458283 RBM17Q96I25 401 aaKnown RBP12.66□□□□□ -0.38
PCCA-208ENST00000458283 TAOK3Q9H2K8 898 aa12.66□□□□□ -0.38
PCCA-208ENST00000458283 NOP58Q9Y2X3 529 aaKnown RBP12.66□□□□□ -0.38
PCCA-208ENST00000458283 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.66□□□□□ -0.38
PCCA-208ENST00000458283 A0A1B0GUL6 1792 aa12.66□□□□□ -0.38
PCCA-208ENST00000458283 SASH1O94885 1247 aa12.65□□□□□ -0.38
PCCA-208ENST00000458283 IL15P40933 162 aaPredicted RBP12.65□□□□□ -0.38
PCCA-208ENST00000458283 GRAPQ13588 217 aa12.65□□□□□ -0.38
PCCA-208ENST00000458283 CRY2Q49AN0 593 aa12.65□□□□□ -0.38
PCCA-208ENST00000458283 SOGA3Q5TF21 947 aa12.65□□□□□ -0.38
PCCA-208ENST00000458283 TSHZ3Q63HK5 1081 aa12.65□□□□□ -0.38
PCCA-208ENST00000458283 PRPF40BQ6NWY9 871 aaKnown RBP12.65□□□□□ -0.38
PCCA-208ENST00000458283 AACSQ86V21 672 aa12.65□□□□□ -0.38
PCCA-208ENST00000458283 GRAPLQ8TC17 118 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms