RNA–Protein interactions for RNA: ENST00000457602.1

LINC01888-202, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2 BASIC

Gene LINC01888, Length 574 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-202ENST00000457602 MOXD2PA6NHM9 499 aa11.01□□□□□ -0.65
LINC01888-202ENST00000457602 HSPA6P17066 643 aa11.01□□□□□ -0.65
LINC01888-202ENST00000457602 TM4SF1P30408 202 aa11.01□□□□□ -0.65
LINC01888-202ENST00000457602 MMP16P51512 607 aa11.01□□□□□ -0.65
LINC01888-202ENST00000457602 CFAP53Q96M91 514 aa11.01□□□□□ -0.65
LINC01888-202ENST00000457602 USB1Q9BQ65 265 aaKnown RBP11.01□□□□□ -0.65
LINC01888-202ENST00000457602 NARFQ9UHQ1 456 aa11.01□□□□□ -0.65
LINC01888-202ENST00000457602 NPC1L1Q9UHC9 1359 aa11.01□□□□□ -0.65
LINC01888-202ENST00000457602 KCPQ6ZWJ8 1503 aa11□□□□□ -0.65
LINC01888-202ENST00000457602 GNAT3A8MTJ3 354 aa11□□□□□ -0.65
LINC01888-202ENST00000457602 STARD3NLO95772 234 aa11□□□□□ -0.65
LINC01888-202ENST00000457602 FDX1P10109 184 aa11□□□□□ -0.65
LINC01888-202ENST00000457602 SLC19A1P41440 591 aa11□□□□□ -0.65
LINC01888-202ENST00000457602 NFIXQ14938 502 aa11□□□□□ -0.65
LINC01888-202ENST00000457602 C9orf131Q5VYM1 1079 aa11□□□□□ -0.65
LINC01888-202ENST00000457602 LIAT1Q6ZQX7 453 aa11□□□□□ -0.65
LINC01888-202ENST00000457602 ZNF330Q9Y3S2 320 aaPredicted RBP11□□□□□ -0.65
LINC01888-202ENST00000457602 NDUFV2P19404 249 aa10.99□□□□□ -0.65
LINC01888-202ENST00000457602 BICDL1Q6ZP65 573 aa10.99□□□□□ -0.65
LINC01888-202ENST00000457602 NPM2Q86SE8 214 aaKnown RBP10.99□□□□□ -0.65
LINC01888-202ENST00000457602 IL17REQ8NFR9 667 aa10.99□□□□□ -0.65
LINC01888-202ENST00000457602 TBC1D2Q9BYX2 928 aa10.99□□□□□ -0.65
LINC01888-202ENST00000457602 FCF1Q9Y324 198 aaKnown RBP10.99□□□□□ -0.65
LINC01888-202ENST00000457602 VIRMAQ69YN4 1812 aaKnown RBP10.99□□□□□ -0.65
LINC01888-202ENST00000457602 COL3A1P02461 1466 aaPredicted RBP10.99□□□□□ -0.65
LINC01888-202ENST00000457602 DXOO77932 396 aaKnown RBP10.98□□□□□ -0.65
LINC01888-202ENST00000457602 SERPINB2P05120 415 aa10.98□□□□□ -0.65
LINC01888-202ENST00000457602 PRKAR2BP31323 418 aa10.98□□□□□ -0.65
LINC01888-202ENST00000457602 ZNF790Q6PG37 636 aa10.98□□□□□ -0.65
LINC01888-202ENST00000457602 SYMPKQ92797 1274 aaKnown RBP10.98□□□□□ -0.65
LINC01888-202ENST00000457602 ZNF496Q96IT1 587 aaPredicted RBP10.98□□□□□ -0.65
LINC01888-202ENST00000457602 NMRK2Q9NPI5 230 aa10.98□□□□□ -0.65
LINC01888-202ENST00000457602 RNF181Q9P0P0 153 aa10.98□□□□□ -0.65
LINC01888-202ENST00000457602 NUDCQ9Y266 331 aa10.98□□□□□ -0.65
LINC01888-202ENST00000457602 ADAMTS7Q9UKP4 1686 aa10.98□□□□□ -0.65
LINC01888-202ENST00000457602 BRCA1P38398 1863 aaKnown RBP10.98□□□□□ -0.65
LINC01888-202ENST00000457602 A0A087WZG4 1122 aa10.97□□□□□ -0.65
LINC01888-202ENST00000457602 TOMM70O94826 608 aa10.97□□□□□ -0.65
LINC01888-202ENST00000457602 EIF5P55010 431 aaKnown RBP10.97□□□□□ -0.65
LINC01888-202ENST00000457602 SPRYD7Q5W111 196 aa10.97□□□□□ -0.65
LINC01888-202ENST00000457602 C16orf71Q8IYS4 520 aaPredicted RBP10.97□□□□□ -0.65
LINC01888-202ENST00000457602 FMNL2Q96PY5 1086 aa10.97□□□□□ -0.65
LINC01888-202ENST00000457602 TEX13AQ9BXU3 409 aaPredicted RBP10.97□□□□□ -0.65
LINC01888-202ENST00000457602 HEG1Q9ULI3 1381 aa10.97□□□□□ -0.65
LINC01888-202ENST00000457602 ARFGEF1Q9Y6D6 1849 aa10.96□□□□□ -0.65
LINC01888-202ENST00000457602 BTBD11A6QL63 1104 aa10.96□□□□□ -0.65
LINC01888-202ENST00000457602 U2AF1L5P0DN76 240 aaPredicted RBP10.96□□□□□ -0.65
LINC01888-202ENST00000457602 GJA5P36382 358 aa10.96□□□□□ -0.65
LINC01888-202ENST00000457602 U2AF1Q01081 240 aaKnown RBP eCLIP10.96□□□□□ -0.65
LINC01888-202ENST00000457602 RETREG3Q86VR2 466 aa10.96□□□□□ -0.65
LINC01888-202ENST00000457602 C2CD5Q86YS7 1000 aa10.96□□□□□ -0.65
LINC01888-202ENST00000457602 TBC1D2BQ9UPU7 963 aa10.96□□□□□ -0.65
LINC01888-202ENST00000457602 UBR2Q8IWV8 1755 aa10.95□□□□□ -0.66
LINC01888-202ENST00000457602 KDM2BQ8NHM5 1336 aa10.95□□□□□ -0.66
LINC01888-202ENST00000457602 H0YIN7 160 aa10.95□□□□□ -0.66
LINC01888-202ENST00000457602 NPHP1O15259 732 aa10.95□□□□□ -0.66
LINC01888-202ENST00000457602 RASSF7Q02833 373 aa10.95□□□□□ -0.66
LINC01888-202ENST00000457602 LAPTM4AQ15012 233 aa10.95□□□□□ -0.66
LINC01888-202ENST00000457602 DIXDC1Q155Q3 683 aa10.95□□□□□ -0.66
LINC01888-202ENST00000457602 TBC1D9BQ66K14 1250 aa10.95□□□□□ -0.66
LINC01888-202ENST00000457602 RSBN1LQ6PCB5 846 aaPredicted RBP10.95□□□□□ -0.66
LINC01888-202ENST00000457602 TRIM67Q6ZTA4 783 aa10.95□□□□□ -0.66
LINC01888-202ENST00000457602 RTF1Q92541 710 aaKnown RBP10.95□□□□□ -0.66
LINC01888-202ENST00000457602 PHACTR3Q96KR7 559 aa10.95□□□□□ -0.66
LINC01888-202ENST00000457602 RSPH6AQ9H0K4 717 aa10.95□□□□□ -0.66
LINC01888-202ENST00000457602 AFDNP55196 1824 aaKnown RBP10.94□□□□□ -0.66
LINC01888-202ENST00000457602 KCNQ3O43525 872 aa10.94□□□□□ -0.66
LINC01888-202ENST00000457602 A1BGP04217 495 aa10.94□□□□□ -0.66
LINC01888-202ENST00000457602 PPP2R1AP30153 589 aa10.94□□□□□ -0.66
LINC01888-202ENST00000457602 IL6STP40189 918 aaPredicted RBP10.94□□□□□ -0.66
LINC01888-202ENST00000457602 TTLL6Q8N841 843 aa10.94□□□□□ -0.66
LINC01888-202ENST00000457602 ZNF622Q969S3 477 aaKnown RBP eCLIP10.94□□□□□ -0.66
LINC01888-202ENST00000457602 CARMIL3Q8ND23 1372 aa10.93□□□□□ -0.66
LINC01888-202ENST00000457602 CEMIPQ8WUJ3 1361 aa10.93□□□□□ -0.66
LINC01888-202ENST00000457602 SPTLC1O15269 473 aa10.93□□□□□ -0.66
LINC01888-202ENST00000457602 GFRA3O60609 400 aa10.93□□□□□ -0.66
LINC01888-202ENST00000457602 ZNF598Q86UK7 904 aaKnown RBP10.93□□□□□ -0.66
LINC01888-202ENST00000457602 CCDC24Q8N4L8 307 aa10.93□□□□□ -0.66
LINC01888-202ENST00000457602 RRAGCQ9HB90 399 aa10.93□□□□□ -0.66
LINC01888-202ENST00000457602 RPIAP49247 311 aa10.92□□□□□ -0.66
LINC01888-202ENST00000457602 Q6ZNB5 142 aa10.92□□□□□ -0.66
LINC01888-202ENST00000457602 MCM10Q7L590 875 aa10.92□□□□□ -0.66
LINC01888-202ENST00000457602 DZIP3Q86Y13 1208 aaKnown RBP10.92□□□□□ -0.66
LINC01888-202ENST00000457602 SETDB2Q96T68 719 aa10.92□□□□□ -0.66
LINC01888-202ENST00000457602 USP16Q9Y5T5 823 aa10.92□□□□□ -0.66
LINC01888-202ENST00000457602 NRXN2Q9P2S2 1712 aa10.92□□□□□ -0.66
LINC01888-202ENST00000457602 SIPA1L3O60292 1781 aaPredicted RBP10.91□□□□□ -0.66
LINC01888-202ENST00000457602 NEFMP07197 916 aa10.91□□□□□ -0.66
LINC01888-202ENST00000457602 JUNDP17535 347 aa10.91□□□□□ -0.66
LINC01888-202ENST00000457602 LMNB1P20700 586 aa10.91□□□□□ -0.66
LINC01888-202ENST00000457602 PDE6BP35913 854 aa10.91□□□□□ -0.66
LINC01888-202ENST00000457602 PIP4K2AP48426 406 aaPredicted RBP10.91□□□□□ -0.66
LINC01888-202ENST00000457602 DCTN1Q14203 1278 aa10.91□□□□□ -0.66
LINC01888-202ENST00000457602 MYSM1Q5VVJ2 828 aa10.91□□□□□ -0.66
LINC01888-202ENST00000457602 PRR5LQ6MZQ0 368 aa10.91□□□□□ -0.66
LINC01888-202ENST00000457602 CNBD1Q8NA66 436 aa10.91□□□□□ -0.66
LINC01888-202ENST00000457602 BRIP1Q9BX63 1249 aa10.91□□□□□ -0.66
LINC01888-202ENST00000457602 PDZRN3Q9UPQ7 1066 aa10.91□□□□□ -0.66
LINC01888-202ENST00000457602 PRAMEF22A3QJZ6 481 aa10.9□□□□□ -0.66
LINC01888-202ENST00000457602 C6orf229H3BNL8 230 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms