RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 LTBP3Q9NS15 1303 aa25.6■■□□□ 1.69
FAM3A-217ENST00000457212 PNMA6EA0A0J9YXQ4 647 aa25.59■■□□□ 1.69
FAM3A-217ENST00000457212 POLA2Q14181 598 aa25.59■■□□□ 1.69
FAM3A-217ENST00000457212 SSH3Q8TE77 659 aa25.59■■□□□ 1.69
FAM3A-217ENST00000457212 PSMD1Q99460 953 aa25.59■■□□□ 1.69
FAM3A-217ENST00000457212 ANKRD2Q9GZV1 360 aa25.59■■□□□ 1.69
FAM3A-217ENST00000457212 FKBP4Q02790 459 aaKnown RBP eCLIP25.58■■□□□ 1.69
FAM3A-217ENST00000457212 DPP8Q6V1X1 898 aaPredicted RBP25.58■■□□□ 1.69
FAM3A-217ENST00000457212 TAOK3Q9H2K8 898 aa25.58■■□□□ 1.69
FAM3A-217ENST00000457212 PODXL2Q9NZ53 605 aa25.58■■□□□ 1.69
FAM3A-217ENST00000457212 NSFL1CQ9UNZ2 370 aaKnown RBP25.58■■□□□ 1.69
FAM3A-217ENST00000457212 NFKBIEO00221 500 aa25.57■■□□□ 1.68
FAM3A-217ENST00000457212 SUPT20HQ8NEM7 779 aa25.57■■□□□ 1.68
FAM3A-217ENST00000457212 KLHDC4Q8TBB5 520 aa25.57■■□□□ 1.68
FAM3A-217ENST00000457212 XDHP47989 1333 aa25.57■■□□□ 1.68
FAM3A-217ENST00000457212 EYA2O00167 538 aa25.56■■□□□ 1.68
FAM3A-217ENST00000457212 HMMRO75330 724 aa25.56■■□□□ 1.68
FAM3A-217ENST00000457212 CIAO1O76071 339 aa25.56■■□□□ 1.68
FAM3A-217ENST00000457212 GPSM2P81274 684 aa25.56■■□□□ 1.68
FAM3A-217ENST00000457212 SLC51AQ86UW1 340 aa25.56■■□□□ 1.68
FAM3A-217ENST00000457212 RTFDC1Q9BY42 306 aaPredicted RBP25.56■■□□□ 1.68
FAM3A-217ENST00000457212 ANKIB1Q9P2G1 1089 aa25.56■■□□□ 1.68
FAM3A-217ENST00000457212 RIPOR2Q9Y4F9 1068 aa25.56■■□□□ 1.68
FAM3A-217ENST00000457212 MROH5Q6ZUA9 1318 aa25.56■■□□□ 1.68
FAM3A-217ENST00000457212 CHRNDQ07001 517 aa25.55■■□□□ 1.68
FAM3A-217ENST00000457212 PUS3Q9BZE2 481 aaKnown RBP25.55■■□□□ 1.68
FAM3A-217ENST00000457212 LTBP1Q14766 1721 aa25.54■■□□□ 1.68
FAM3A-217ENST00000457212 ATP2B4P23634 1241 aa25.53■■□□□ 1.68
FAM3A-217ENST00000457212 LRRC24Q50LG9 513 aa25.53■■□□□ 1.68
FAM3A-217ENST00000457212 EXOC6Q8TAG9 804 aa25.53■■□□□ 1.68
FAM3A-217ENST00000457212 VPS33BQ9H267 617 aa25.53■■□□□ 1.68
FAM3A-217ENST00000457212 GGA1Q9UJY5 639 aa25.53■■□□□ 1.68
FAM3A-217ENST00000457212 PA2G4Q9UQ80 394 aaKnown RBP25.53■■□□□ 1.68
FAM3A-217ENST00000457212 LEMD3Q9Y2U8 911 aa25.53■■□□□ 1.68
FAM3A-217ENST00000457212 IL15P40933 162 aaPredicted RBP25.52■■□□□ 1.68
FAM3A-217ENST00000457212 RASSF7Q02833 373 aa25.52■■□□□ 1.68
FAM3A-217ENST00000457212 TBC1D16Q8TBP0 767 aa25.52■■□□□ 1.68
FAM3A-217ENST00000457212 SIL1Q9H173 461 aa25.52■■□□□ 1.68
FAM3A-217ENST00000457212 DUOX1Q9NRD9 1551 aa25.52■■□□□ 1.68
FAM3A-217ENST00000457212 A0A1B0GUL6 1792 aa25.51■■□□□ 1.67
FAM3A-217ENST00000457212 LMNB1P20700 586 aa25.51■■□□□ 1.67
FAM3A-217ENST00000457212 ATG9AQ7Z3C6 839 aa25.51■■□□□ 1.67
FAM3A-217ENST00000457212 SIRT2Q8IXJ6 389 aa25.51■■□□□ 1.67
FAM3A-217ENST00000457212 NOP58Q9Y2X3 529 aaKnown RBP25.51■■□□□ 1.67
FAM3A-217ENST00000457212 C6orf229H3BNL8 230 aa25.5■■□□□ 1.67
FAM3A-217ENST00000457212 UFL1O94874 794 aa25.5■■□□□ 1.67
FAM3A-217ENST00000457212 IRX6P78412 446 aaPredicted RBP25.5■■□□□ 1.67
FAM3A-217ENST00000457212 G3BP1Q13283 466 aaKnown RBP eCLIP25.5■■□□□ 1.67
FAM3A-217ENST00000457212 METTL24Q5JXM2 366 aa25.5■■□□□ 1.67
FAM3A-217ENST00000457212 EYA3Q99504 573 aa25.5■■□□□ 1.67
FAM3A-217ENST00000457212 POLLQ9UGP5 575 aa25.5■■□□□ 1.67
FAM3A-217ENST00000457212 SURF6O75683 361 aaKnown RBP25.49■■□□□ 1.67
FAM3A-217ENST00000457212 PCDHB15Q9Y5E8 787 aa25.49■■□□□ 1.67
FAM3A-217ENST00000457212 SBF1O95248 1867 aa25.49■■□□□ 1.67
FAM3A-217ENST00000457212 ZNF804BA4D1E1 1349 aa25.48■■□□□ 1.67
FAM3A-217ENST00000457212 PDE8BO95263 885 aa25.48■■□□□ 1.67
FAM3A-217ENST00000457212 IARSP41252 1262 aaKnown RBP25.48■■□□□ 1.67
FAM3A-217ENST00000457212 KCNJ4P48050 445 aa25.48■■□□□ 1.67
FAM3A-217ENST00000457212 HELBQ8NG08 1087 aaPredicted RBP25.48■■□□□ 1.67
FAM3A-217ENST00000457212 ZNF277Q9NRM2 450 aaPredicted RBP25.48■■□□□ 1.67
FAM3A-217ENST00000457212 TAF5LO75529 589 aa25.47■■□□□ 1.67
FAM3A-217ENST00000457212 HSP90AB4PQ58FF6 505 aa25.47■■□□□ 1.67
FAM3A-217ENST00000457212 VGLL2Q8N8G2 317 aa25.47■■□□□ 1.67
FAM3A-217ENST00000457212 CEP126Q9P2H0 1117 aa25.47■■□□□ 1.67
FAM3A-217ENST00000457212 KIAA2012Q0VF49 1180 aa25.46■■□□□ 1.67
FAM3A-217ENST00000457212 UBE4AQ14139 1066 aa25.46■■□□□ 1.67
FAM3A-217ENST00000457212 WASHC4Q2M389 1173 aa25.46■■□□□ 1.67
FAM3A-217ENST00000457212 ZC3H12CQ9C0D7 883 aaKnown RBP25.46■■□□□ 1.67
FAM3A-217ENST00000457212 CCDC88AQ3V6T2 1871 aa25.46■■□□□ 1.67
FAM3A-217ENST00000457212 CHD4Q14839 1912 aa25.45■■□□□ 1.67
FAM3A-217ENST00000457212 PPIP5K2O43314 1243 aa25.45■■□□□ 1.66
FAM3A-217ENST00000457212 PRELPP51888 382 aa25.45■■□□□ 1.66
FAM3A-217ENST00000457212 OS9Q13438 667 aaPredicted RBP25.45■■□□□ 1.66
FAM3A-217ENST00000457212 DICER1Q9UPY3 1922 aaKnown RBP25.45■■□□□ 1.66
FAM3A-217ENST00000457212 MED23Q9ULK4 1368 aa25.44■■□□□ 1.66
FAM3A-217ENST00000457212 C9orf131Q5VYM1 1079 aa25.44■■□□□ 1.66
FAM3A-217ENST00000457212 ERC1Q8IUD2 1116 aa25.44■■□□□ 1.66
FAM3A-217ENST00000457212 LARGE2Q8N3Y3 721 aa25.44■■□□□ 1.66
FAM3A-217ENST00000457212 RNF181Q9P0P0 153 aa25.44■■□□□ 1.66
FAM3A-217ENST00000457212 NEFLP07196 543 aa25.43■■□□□ 1.66
FAM3A-217ENST00000457212 PUM3Q15397 648 aaKnown RBP25.43■■□□□ 1.66
FAM3A-217ENST00000457212 AOC3Q16853 763 aa25.43■■□□□ 1.66
FAM3A-217ENST00000457212 C15orf52Q6ZUT6 534 aaKnown RBP25.43■■□□□ 1.66
FAM3A-217ENST00000457212 JDP2Q8WYK2 163 aa25.42■■□□□ 1.66
FAM3A-217ENST00000457212 EXOC6BQ9Y2D4 811 aa25.42■■□□□ 1.66
FAM3A-217ENST00000457212 AKAP2Q9Y2D5 859 aa25.42■■□□□ 1.66
FAM3A-217ENST00000457212 ZC3H4Q9UPT8 1303 aaKnown RBP25.41■■□□□ 1.66
FAM3A-217ENST00000457212 UTRNP46939 3433 aa25.41■■□□□ 1.66
FAM3A-217ENST00000457212 WTIPA6NIX2 430 aaPredicted RBP25.41■■□□□ 1.66
FAM3A-217ENST00000457212 SASH1O94885 1247 aa25.41■■□□□ 1.66
FAM3A-217ENST00000457212 TFCP2Q12800 502 aa25.41■■□□□ 1.66
FAM3A-217ENST00000457212 HDAC1Q13547 482 aaPredicted RBP25.41■■□□□ 1.66
FAM3A-217ENST00000457212 SNAP23O00161 211 aa25.4■■□□□ 1.66
FAM3A-217ENST00000457212 RIMBP2O15034 1052 aa25.4■■□□□ 1.66
FAM3A-217ENST00000457212 RAB11FIP3O75154 756 aa25.4■■□□□ 1.66
FAM3A-217ENST00000457212 FGFR2P21802 821 aa25.4■■□□□ 1.66
FAM3A-217ENST00000457212 ATP2B3Q16720 1220 aa25.4■■□□□ 1.66
FAM3A-217ENST00000457212 NIM1KQ8IY84 436 aa25.4■■□□□ 1.66
FAM3A-217ENST00000457212 LPIN2Q92539 896 aa25.4■■□□□ 1.66
FAM3A-217ENST00000457212 GPR101Q96P66 508 aaPredicted RBP25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms