RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 LMNB1P20700 586 aa17.67■□□□□ 0.42
SMPD4-215ENST00000457039 DPP8Q6V1X1 898 aaPredicted RBP17.67■□□□□ 0.42
SMPD4-215ENST00000457039 C1orf115Q9H7X2 142 aa17.67■□□□□ 0.42
SMPD4-215ENST00000457039 NSFL1CQ9UNZ2 370 aaKnown RBP17.67■□□□□ 0.42
SMPD4-215ENST00000457039 PTPN12Q05209 780 aaKnown RBP17.66■□□□□ 0.42
SMPD4-215ENST00000457039 TAF7LQ5H9L4 462 aa17.66■□□□□ 0.42
SMPD4-215ENST00000457039 KLHDC4Q8TBB5 520 aa17.66■□□□□ 0.42
SMPD4-215ENST00000457039 POLLQ9UGP5 575 aa17.66■□□□□ 0.42
SMPD4-215ENST00000457039 C9orf131Q5VYM1 1079 aa17.65■□□□□ 0.42
SMPD4-215ENST00000457039 LDHAL6AQ6ZMR3 332 aa17.65■□□□□ 0.42
SMPD4-215ENST00000457039 TBC1D16Q8TBP0 767 aa17.65■□□□□ 0.42
SMPD4-215ENST00000457039 PUS3Q9BZE2 481 aaKnown RBP17.65■□□□□ 0.42
SMPD4-215ENST00000457039 ZNF277Q9NRM2 450 aaPredicted RBP17.65■□□□□ 0.42
SMPD4-215ENST00000457039 RIPOR2Q9Y4F9 1068 aa17.65■□□□□ 0.42
SMPD4-215ENST00000457039 SUPT16HQ9Y5B9 1047 aaKnown RBP17.65■□□□□ 0.42
SMPD4-215ENST00000457039 XDHP47989 1333 aa17.65■□□□□ 0.42
SMPD4-215ENST00000457039 A0A1B0GUL6 1792 aa17.64■□□□□ 0.41
SMPD4-215ENST00000457039 PNMA6EA0A0J9YXQ4 647 aa17.64■□□□□ 0.41
SMPD4-215ENST00000457039 SRGAP3O43295 1099 aa17.64■□□□□ 0.41
SMPD4-215ENST00000457039 IARSP41252 1262 aaKnown RBP17.64■□□□□ 0.41
SMPD4-215ENST00000457039 CHRNDQ07001 517 aa17.64■□□□□ 0.41
SMPD4-215ENST00000457039 SUPT20HQ8NEM7 779 aa17.64■□□□□ 0.41
SMPD4-215ENST00000457039 VPS33BQ9H267 617 aa17.64■□□□□ 0.41
SMPD4-215ENST00000457039 CHMP4BQ9H444 224 aaKnown RBP17.64■□□□□ 0.41
SMPD4-215ENST00000457039 COPRSQ9NQ92 184 aa17.64■□□□□ 0.41
SMPD4-215ENST00000457039 RNF181Q9P0P0 153 aa17.64■□□□□ 0.41
SMPD4-215ENST00000457039 COL4A5P29400 1685 aa17.64■□□□□ 0.41
SMPD4-215ENST00000457039 ATP8B2P98198 1209 aa17.63■□□□□ 0.41
SMPD4-215ENST00000457039 POLA2Q14181 598 aa17.63■□□□□ 0.41
SMPD4-215ENST00000457039 LRRC24Q50LG9 513 aa17.63■□□□□ 0.41
SMPD4-215ENST00000457039 CEP85Q6P2H3 762 aa17.63■□□□□ 0.41
SMPD4-215ENST00000457039 ANKRD2Q9GZV1 360 aa17.63■□□□□ 0.41
SMPD4-215ENST00000457039 CNNM1Q9NRU3 951 aa17.63■□□□□ 0.41
SMPD4-215ENST00000457039 ANKIB1Q9P2G1 1089 aa17.63■□□□□ 0.41
SMPD4-215ENST00000457039 CCDC88AQ3V6T2 1871 aa17.63■□□□□ 0.41
SMPD4-215ENST00000457039 DICER1Q9UPY3 1922 aaKnown RBP17.62■□□□□ 0.41
SMPD4-215ENST00000457039 WTIPA6NIX2 430 aaPredicted RBP17.62■□□□□ 0.41
SMPD4-215ENST00000457039 EYA2O00167 538 aa17.62■□□□□ 0.41
SMPD4-215ENST00000457039 ATP2B4P23634 1241 aa17.62■□□□□ 0.41
SMPD4-215ENST00000457039 KIAA2012Q0VF49 1180 aa17.62■□□□□ 0.41
SMPD4-215ENST00000457039 SSH3Q8TE77 659 aa17.62■□□□□ 0.41
SMPD4-215ENST00000457039 GGA1Q9UJY5 639 aa17.62■□□□□ 0.41
SMPD4-215ENST00000457039 FBXO3Q9UK99 471 aa17.62■□□□□ 0.41
SMPD4-215ENST00000457039 UFL1O94874 794 aa17.61■□□□□ 0.41
SMPD4-215ENST00000457039 ATG9AQ7Z3C6 839 aa17.61■□□□□ 0.41
SMPD4-215ENST00000457039 PA2G4Q9UQ80 394 aaKnown RBP17.61■□□□□ 0.41
SMPD4-215ENST00000457039 LEMD3Q9Y2U8 911 aa17.61■□□□□ 0.41
SMPD4-215ENST00000457039 MROH5Q6ZUA9 1318 aa17.61■□□□□ 0.41
SMPD4-215ENST00000457039 ZC3H4Q9UPT8 1303 aaKnown RBP17.61■□□□□ 0.41
SMPD4-215ENST00000457039 TIAM2Q8IVF5 1701 aa17.61■□□□□ 0.41
SMPD4-215ENST00000457039 C6orf229H3BNL8 230 aa17.6■□□□□ 0.41
SMPD4-215ENST00000457039 PPIP5K2O43314 1243 aa17.6■□□□□ 0.41
SMPD4-215ENST00000457039 TAF5LO75529 589 aa17.6■□□□□ 0.41
SMPD4-215ENST00000457039 CIAO1O76071 339 aa17.6■□□□□ 0.41
SMPD4-215ENST00000457039 AOC3Q16853 763 aa17.6■□□□□ 0.41
SMPD4-215ENST00000457039 VGLL2Q8N8G2 317 aa17.6■□□□□ 0.41
SMPD4-215ENST00000457039 GPR101Q96P66 508 aaPredicted RBP17.6■□□□□ 0.41
SMPD4-215ENST00000457039 CRBNQ96SW2 442 aa17.6■□□□□ 0.41
SMPD4-215ENST00000457039 EYA3Q99504 573 aa17.6■□□□□ 0.41
SMPD4-215ENST00000457039 ZNF804BA4D1E1 1349 aa17.59■□□□□ 0.41
SMPD4-215ENST00000457039 IRS2Q9Y4H2 1338 aa17.59■□□□□ 0.41
SMPD4-215ENST00000457039 WASHC4Q2M389 1173 aa17.59■□□□□ 0.41
SMPD4-215ENST00000457039 RPAP2Q8IXW5 612 aaPredicted RBP17.59■□□□□ 0.41
SMPD4-215ENST00000457039 HELBQ8NG08 1087 aaPredicted RBP17.59■□□□□ 0.41
SMPD4-215ENST00000457039 MED23Q9ULK4 1368 aa17.58■□□□□ 0.4
SMPD4-215ENST00000457039 FZD9O00144 591 aa17.58■□□□□ 0.4
SMPD4-215ENST00000457039 SNAP23O00161 211 aa17.58■□□□□ 0.4
SMPD4-215ENST00000457039 SIRT2Q8IXJ6 389 aa17.58■□□□□ 0.4
SMPD4-215ENST00000457039 LARGE2Q8N3Y3 721 aa17.58■□□□□ 0.4
SMPD4-215ENST00000457039 SIL1Q9H173 461 aa17.58■□□□□ 0.4
SMPD4-215ENST00000457039 IL15P40933 162 aaPredicted RBP17.57■□□□□ 0.4
SMPD4-215ENST00000457039 METTL24Q5JXM2 366 aa17.57■□□□□ 0.4
SMPD4-215ENST00000457039 C15orf52Q6ZUT6 534 aaKnown RBP17.57■□□□□ 0.4
SMPD4-215ENST00000457039 RIMBP2O15034 1052 aa17.56■□□□□ 0.4
SMPD4-215ENST00000457039 PDE8BO95263 885 aa17.56■□□□□ 0.4
SMPD4-215ENST00000457039 YY1P25490 414 aa17.56■□□□□ 0.4
SMPD4-215ENST00000457039 KLRK1P26718 216 aa17.56■□□□□ 0.4
SMPD4-215ENST00000457039 UBE4AQ14139 1066 aa17.56■□□□□ 0.4
SMPD4-215ENST00000457039 TXNRD3Q86VQ6 643 aa17.56■□□□□ 0.4
SMPD4-215ENST00000457039 JDP2Q8WYK2 163 aa17.56■□□□□ 0.4
SMPD4-215ENST00000457039 ZC3H12CQ9C0D7 883 aaKnown RBP17.56■□□□□ 0.4
SMPD4-215ENST00000457039 NOP58Q9Y2X3 529 aaKnown RBP17.56■□□□□ 0.4
SMPD4-215ENST00000457039 FGFR2P21802 821 aa17.55■□□□□ 0.4
SMPD4-215ENST00000457039 NIM1KQ8IY84 436 aa17.55■□□□□ 0.4
SMPD4-215ENST00000457039 ZNF541Q9H0D2 1346 aa17.54■□□□□ 0.4
SMPD4-215ENST00000457039 YDJCA8MPS7 323 aa17.54■□□□□ 0.4
SMPD4-215ENST00000457039 KCNJ4P48050 445 aa17.54■□□□□ 0.4
SMPD4-215ENST00000457039 ZNRF3Q9ULT6 936 aa17.54■□□□□ 0.4
SMPD4-215ENST00000457039 DOK7Q18PE1 504 aa17.53■□□□□ 0.4
SMPD4-215ENST00000457039 DBNDD1Q9H9R9 158 aa17.53■□□□□ 0.4
SMPD4-215ENST00000457039 CEP126Q9P2H0 1117 aa17.53■□□□□ 0.4
SMPD4-215ENST00000457039 PCDHB15Q9Y5E8 787 aa17.53■□□□□ 0.4
SMPD4-215ENST00000457039 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.53■□□□□ 0.4
SMPD4-215ENST00000457039 GLTPD2A6NH11 291 aa17.52■□□□□ 0.4
SMPD4-215ENST00000457039 ECE2O60344 883 aa17.52■□□□□ 0.4
SMPD4-215ENST00000457039 HMMRO75330 724 aa17.52■□□□□ 0.4
SMPD4-215ENST00000457039 SURF6O75683 361 aaKnown RBP17.52■□□□□ 0.4
SMPD4-215ENST00000457039 SASH1O94885 1247 aa17.52■□□□□ 0.4
SMPD4-215ENST00000457039 G3BP1Q13283 466 aaKnown RBP eCLIP17.52■□□□□ 0.4
SMPD4-215ENST00000457039 AAMPQ13685 434 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms