RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 PUS3Q9BZE2 481 aaKnown RBP22.23■■□□□ 1.15
FAM239A-203ENST00000456563 CNNM1Q9NRU3 951 aa22.23■■□□□ 1.15
FAM239A-203ENST00000456563 PA2G4Q9UQ80 394 aaKnown RBP22.23■■□□□ 1.15
FAM239A-203ENST00000456563 RIPOR2Q9Y4F9 1068 aa22.23■■□□□ 1.15
FAM239A-203ENST00000456563 LRRC37AA6NMS7 1700 aa22.23■■□□□ 1.15
FAM239A-203ENST00000456563 DCAF8L1A6NGE4 600 aa22.22■■□□□ 1.15
FAM239A-203ENST00000456563 EYA2O00167 538 aa22.22■■□□□ 1.15
FAM239A-203ENST00000456563 HMMRO75330 724 aa22.22■■□□□ 1.15
FAM239A-203ENST00000456563 CIAO1O76071 339 aa22.22■■□□□ 1.15
FAM239A-203ENST00000456563 LRRC24Q50LG9 513 aa22.22■■□□□ 1.15
FAM239A-203ENST00000456563 PODXL2Q9NZ53 605 aa22.22■■□□□ 1.15
FAM239A-203ENST00000456563 PCDHB15Q9Y5E8 787 aa22.22■■□□□ 1.15
FAM239A-203ENST00000456563 GPSM2P81274 684 aa22.21■■□□□ 1.15
FAM239A-203ENST00000456563 CHRNDQ07001 517 aa22.21■■□□□ 1.15
FAM239A-203ENST00000456563 MPNDQ8N594 471 aa22.21■■□□□ 1.15
FAM239A-203ENST00000456563 NFKBIEO00221 500 aa22.2■■□□□ 1.14
FAM239A-203ENST00000456563 ARHGAP27Q6ZUM4 889 aa22.2■■□□□ 1.14
FAM239A-203ENST00000456563 PSMD1Q99460 953 aa22.2■■□□□ 1.14
FAM239A-203ENST00000456563 ANKRD2Q9GZV1 360 aa22.2■■□□□ 1.14
FAM239A-203ENST00000456563 NSFL1CQ9UNZ2 370 aaKnown RBP22.2■■□□□ 1.14
FAM239A-203ENST00000456563 NOP58Q9Y2X3 529 aaKnown RBP22.2■■□□□ 1.14
FAM239A-203ENST00000456563 LTBP3Q9NS15 1303 aa22.2■■□□□ 1.14
FAM239A-203ENST00000456563 FKBP4Q02790 459 aaKnown RBP eCLIP22.19■■□□□ 1.14
FAM239A-203ENST00000456563 DPP8Q6V1X1 898 aaPredicted RBP22.19■■□□□ 1.14
FAM239A-203ENST00000456563 ATG9AQ7Z3C6 839 aa22.19■■□□□ 1.14
FAM239A-203ENST00000456563 RTFDC1Q9BY42 306 aaPredicted RBP22.19■■□□□ 1.14
FAM239A-203ENST00000456563 SIL1Q9H173 461 aa22.19■■□□□ 1.14
FAM239A-203ENST00000456563 ANKIB1Q9P2G1 1089 aa22.19■■□□□ 1.14
FAM239A-203ENST00000456563 XDHP47989 1333 aa22.19■■□□□ 1.14
FAM239A-203ENST00000456563 MROH5Q6ZUA9 1318 aa22.19■■□□□ 1.14
FAM239A-203ENST00000456563 SPEF2Q9C093 1822 aa22.18■■□□□ 1.14
FAM239A-203ENST00000456563 IL15P40933 162 aaPredicted RBP22.18■■□□□ 1.14
FAM239A-203ENST00000456563 TAOK3Q9H2K8 898 aa22.18■■□□□ 1.14
FAM239A-203ENST00000456563 SURF6O75683 361 aaKnown RBP22.17■■□□□ 1.14
FAM239A-203ENST00000456563 ATP2B4P23634 1241 aa22.17■■□□□ 1.14
FAM239A-203ENST00000456563 SUPT20HQ8NEM7 779 aa22.17■■□□□ 1.14
FAM239A-203ENST00000456563 LEMD3Q9Y2U8 911 aa22.17■■□□□ 1.14
FAM239A-203ENST00000456563 FER1L6Q2WGJ9 1857 aa22.17■■□□□ 1.14
FAM239A-203ENST00000456563 G3BP1Q13283 466 aaKnown RBP eCLIP22.16■■□□□ 1.14
FAM239A-203ENST00000456563 METTL24Q5JXM2 366 aa22.16■■□□□ 1.14
FAM239A-203ENST00000456563 VGLL2Q8N8G2 317 aa22.16■■□□□ 1.14
FAM239A-203ENST00000456563 HELBQ8NG08 1087 aaPredicted RBP22.16■■□□□ 1.14
FAM239A-203ENST00000456563 TBC1D16Q8TBP0 767 aa22.16■■□□□ 1.14
FAM239A-203ENST00000456563 POLLQ9UGP5 575 aa22.16■■□□□ 1.14
FAM239A-203ENST00000456563 GGA1Q9UJY5 639 aa22.16■■□□□ 1.14
FAM239A-203ENST00000456563 LTBP1Q14766 1721 aa22.16■■□□□ 1.14
FAM239A-203ENST00000456563 NEFLP07196 543 aa22.15■■□□□ 1.14
FAM239A-203ENST00000456563 RASSF7Q02833 373 aa22.15■■□□□ 1.14
FAM239A-203ENST00000456563 VPS33BQ9H267 617 aa22.15■■□□□ 1.14
FAM239A-203ENST00000456563 DUOX1Q9NRD9 1551 aa22.15■■□□□ 1.14
FAM239A-203ENST00000456563 TAF5LO75529 589 aa22.14■■□□□ 1.13
FAM239A-203ENST00000456563 UFL1O94874 794 aa22.14■■□□□ 1.13
FAM239A-203ENST00000456563 PDE8BO95263 885 aa22.14■■□□□ 1.13
FAM239A-203ENST00000456563 CEP126Q9P2H0 1117 aa22.14■■□□□ 1.13
FAM239A-203ENST00000456563 C6orf229H3BNL8 230 aa22.13■■□□□ 1.13
FAM239A-203ENST00000456563 HSP90AB4PQ58FF6 505 aa22.13■■□□□ 1.13
FAM239A-203ENST00000456563 ZNF804BA4D1E1 1349 aa22.12■■□□□ 1.13
FAM239A-203ENST00000456563 HDAC1Q13547 482 aaPredicted RBP22.12■■□□□ 1.13
FAM239A-203ENST00000456563 UBE4AQ14139 1066 aa22.12■■□□□ 1.13
FAM239A-203ENST00000456563 EYA3Q99504 573 aa22.12■■□□□ 1.13
FAM239A-203ENST00000456563 ZNF277Q9NRM2 450 aaPredicted RBP22.12■■□□□ 1.13
FAM239A-203ENST00000456563 EXOC6BQ9Y2D4 811 aa22.12■■□□□ 1.13
FAM239A-203ENST00000456563 WTIPA6NIX2 430 aaPredicted RBP22.11■■□□□ 1.13
FAM239A-203ENST00000456563 SASH1O94885 1247 aa22.11■■□□□ 1.13
FAM239A-203ENST00000456563 LMNB1P20700 586 aa22.11■■□□□ 1.13
FAM239A-203ENST00000456563 IARSP41252 1262 aaKnown RBP22.11■■□□□ 1.13
FAM239A-203ENST00000456563 KCNJ4P48050 445 aa22.11■■□□□ 1.13
FAM239A-203ENST00000456563 PRELPP51888 382 aa22.11■■□□□ 1.13
FAM239A-203ENST00000456563 OS9Q13438 667 aaPredicted RBP22.11■■□□□ 1.13
FAM239A-203ENST00000456563 ERC1Q8IUD2 1116 aa22.11■■□□□ 1.13
FAM239A-203ENST00000456563 GOLGB1Q14789 3259 aaKnown RBP22.11■■□□□ 1.13
FAM239A-203ENST00000456563 A0A1B0GUL6 1792 aa22.1■■□□□ 1.13
FAM239A-203ENST00000456563 SNAP23O00161 211 aa22.1■■□□□ 1.13
FAM239A-203ENST00000456563 RAB11FIP3O75154 756 aa22.1■■□□□ 1.13
FAM239A-203ENST00000456563 FGFR2P21802 821 aa22.1■■□□□ 1.13
FAM239A-203ENST00000456563 KIAA2012Q0VF49 1180 aa22.1■■□□□ 1.13
FAM239A-203ENST00000456563 TFCP2Q12800 502 aa22.1■■□□□ 1.13
FAM239A-203ENST00000456563 PUM3Q15397 648 aaKnown RBP22.1■■□□□ 1.13
FAM239A-203ENST00000456563 WASHC4Q2M389 1173 aa22.1■■□□□ 1.13
FAM239A-203ENST00000456563 C15orf52Q6ZUT6 534 aaKnown RBP22.1■■□□□ 1.13
FAM239A-203ENST00000456563 DCTPP1Q9H773 170 aa22.1■■□□□ 1.13
FAM239A-203ENST00000456563 ZC3H12CQ9C0D7 883 aaKnown RBP22.09■■□□□ 1.13
FAM239A-203ENST00000456563 MED23Q9ULK4 1368 aa22.09■■□□□ 1.13
FAM239A-203ENST00000456563 IRS2Q9Y4H2 1338 aa22.08■■□□□ 1.13
FAM239A-203ENST00000456563 PPIP5K2O43314 1243 aa22.08■■□□□ 1.13
FAM239A-203ENST00000456563 AOC3Q16853 763 aa22.08■■□□□ 1.13
FAM239A-203ENST00000456563 GPR101Q96P66 508 aaPredicted RBP22.08■■□□□ 1.13
FAM239A-203ENST00000456563 RWDD1Q9H446 243 aaPredicted RBP22.08■■□□□ 1.13
FAM239A-203ENST00000456563 AKAP2Q9Y2D5 859 aa22.08■■□□□ 1.13
FAM239A-203ENST00000456563 LARGE2Q8N3Y3 721 aa22.07■■□□□ 1.12
FAM239A-203ENST00000456563 RHPN1Q8TCX5 695 aa22.07■■□□□ 1.12
FAM239A-203ENST00000456563 LPIN2Q92539 896 aa22.07■■□□□ 1.12
FAM239A-203ENST00000456563 KIF1BPQ96EK5 621 aa22.07■■□□□ 1.12
FAM239A-203ENST00000456563 GPR108Q9NPR9 543 aa22.07■■□□□ 1.12
FAM239A-203ENST00000456563 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.07■■□□□ 1.12
FAM239A-203ENST00000456563 RIMBP2O15034 1052 aa22.06■■□□□ 1.12
FAM239A-203ENST00000456563 IFIT1P09914 478 aaKnown RBP22.06■■□□□ 1.12
FAM239A-203ENST00000456563 ATP2B3Q16720 1220 aa22.06■■□□□ 1.12
FAM239A-203ENST00000456563 C9orf131Q5VYM1 1079 aa22.06■■□□□ 1.12
FAM239A-203ENST00000456563 RNF181Q9P0P0 153 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms